ID   JN191614; SV 1; linear; genomic RNA; STD; VRL; 1677 BP.
XX
AC   JN191614;
XX
DT   01-JUN-2012 (Rel. 113, Created)
DT   01-JUN-2012 (Rel. 113, Last updated, Version 1)
XX
DE   Rice black streaked dwarf virus isolate SD-4 P10 gene, complete cds.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-1677
RX   DOI; 10.1007/s00705-012-1282-2.
RX   PUBMED; 22447103.
RA   Li Y., Jia M., Jiang Z., Zhou T., Fan Z.;
RT   "Molecular variation and recombination in RNA segment 10 of rice
RT   black-streaked dwarf virus isolated from China during 2007-2010";
RL   Arch. Virol. 157(7):1351-1356(2012).
XX
RN   [2]
RP   1-1677
RA   Li Y., Jiang Z., Jia M., Zhou T., Fan Z.;
RT   ;
RL   Submitted (29-JUN-2011) to the INSDC.
RL   State Key Laboratory for Agrobiotechnology, China Agricultural University,
RL   2 Yuanmingyuan West Road, Beijing, Beijing 100093, China
XX
DR   MD5; 6b085c680f61987c26c54b796bd3d29c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1677
FT                   /organism="Rice black streaked dwarf virus"
FT                   /segment="10"
FT                   /host="rice"
FT                   /isolate="SD-4"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Shandong"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:10990"
FT   CDS             1..1677
FT                   /codon_start=1
FT                   /product="P10"
FT                   /note="capsid protein"
FT                   /db_xref="InterPro:IPR008618"
FT                   /db_xref="UniProtKB/TrEMBL:I3V6D4"
FT                   /protein_id="AFK73736.1"
FT                   /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNNLFHE
FT                   LNIVKAPHVASSQTTVNLYTRKHLLTRLHDRLQTVETSTLPNITQLKDHIRSFFQNEHQ
FT                   PIFQTLTNNDLSEEFVGVTTFGLSLFATSKLDAEQIERVQIETLTEGNITLKPFSADGL
FT                   EVILDDSYIGIVGKIPGLEVHKLLDKCCREVPAQMGILTDEVKLLMRTGKLRIDGGYDF
FT                   NCPASTTDVTHYGGYDQFSRQMFERLNLFYNISLSIIPVSALKTVHLFEKELSVLDADK
FT                   SLLEQTWSAVASFVETWQVKSKVKADDPDEYELTSLSTLRTNYDGTSTSSPFTDKKFID
FT                   WYIKTFSKTEKGSSLRRNELEEKSATNTSTTVKKVKIHFSVQYFDEFKVNGHEKSIVVQ
FT                   THKGEMTLDYYRKIGEVLSAIWKRGKSLAVPCFDYIKLGVEKAFHLAPVIMKKYNLTID
FT                   DIINFIDKGPSYLAKLDKIDDWSLISKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA
FT                   NNLLKSDRDRLLKKALSANVSSSNTSSHEHTQKIVLNKVTR"
XX
SQ   Sequence 1677 BP; 553 A; 308 C; 291 G; 525 T; 0 other;
     atggctgaca taagactcga catagcgccc gatcttatcc ataatggtgt accccagaga        60
     ctttccgata caataatttt aaacaaccga ccaacaatca ctctgttatc tcatttcaac       120
     aatctatttc atgaattaaa cattgtcaaa gcgccccacg ttgcatcttc ccaaactacc       180
     gttaatttgt acactcgcaa acatttgttg acccgacttc atgatagact acaaaccgta       240
     gaaactagca ctttacccaa catcacgcaa cttaaagacc acattcgcag tttctttcaa       300
     aatgaacacc aacccatttt tcagacccta acgaacaacg acctaagcga agaatttgta       360
     ggtgtgacta cttttggact aagcttattt gctacctcca aacttgatgc tgaacaaata       420
     gaacgtgtgc aaattgagac cttaactgaa ggaaacatta cgttgaagcc cttttccgct       480
     gatggtttag aagtcattct cgatgatagt tatattggta tagttggcaa aattccaggt       540
     ttagaagttc ataaattgtt agataaatgt tgtcgtgaag ttcctgctca aatgggaata       600
     cttactgatg aagttaaact tttgatgcgt actggtaaat taagaattga tggtggttac       660
     gatttcaatt gtcctgcaag cactacagat gttacacact acggtggtta tgaccaattt       720
     tcgcgtcaaa tgttcgaacg tttgaatctt ttttataata ttagtcttag cataattccc       780
     gtttcagctt taaaaacagt tcatttattc gaaaaagaat taagtgtttt ggatgcagac       840
     aaatctttac tcgaacagac ttggagcgca gtagcgtcat ttgttgaaac ctggcaagtt       900
     aaatctaaag ttaaagctga tgatcctgat gaatacgaac tgaccagttt gtccactttg       960
     cgtactaatt atgatggtac ttctacttct agccctttta cagataagaa attcattgac      1020
     tggtatatta agactttttc taagactgaa aaaggatcgt ctttacgtcg aaatgaatta      1080
     gaagagaaaa gtgccactaa tacttcaact acagtaaaga aggttaaaat tcatttctct      1140
     gttcaatatt ttgacgaatt taaagttaat ggacacgaaa aaagcattgt agttcaaact      1200
     cataaaggtg aaatgacact agattattat cgtaaaattg gcgaagtatt aagtgcgatt      1260
     tggaaacgtg gtaaatcttt ggctgtacct tgttttgatt acattaaact tggcgttgaa      1320
     aaagcatttc atttggcacc cgtaattatg aagaagtata acttgacgat cgacgatatt      1380
     atcaacttca ttgataaagg accttcctat ttggctaagt tggacaaaat tgatgattgg      1440
     tctctgattt caaagcttat tattaccagt gttttaccta acattattca agctgtttat      1500
     aaaaccgatc caagtaataa tgttatgaac tcagtaatta tcagtagagc gaacaacttg      1560
     ttgaaatctg atagagacag gctattaaag aaggcacttt ccgccaacgt ttcttcctcc      1620
     aatacttcta gtcatgagca tacacagaag atagtattaa ataaagtgac aagatga         1677
//