ID JN180309; SV 1; linear; genomic RNA; STD; VRL; 3368 BP. XX AC JN180309; XX DT 11-DEC-2011 (Rel. 111, Created) DT 11-DEC-2011 (Rel. 111, Last updated, Version 1) XX DE Cucumber mosaic virus segment RNA1, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3368 RA Kim M.K., Kwak H.R., Kim J.D., Lee S.H., Kim J.S., Kim K.H., Cha B.J., RA Choi H.S.; RT "Characteristics of Cucumber mosaic virus isolated from Zea mays in Korea"; RL Unpublished. XX RN [2] RP 1-3368 RA Kim M.K., Kwak H.R., Kim J.D., Lee S.H., Kim J.S., Kim K.H., Cha B.J., RA Choi H.S.; RT ; RL Submitted (24-JUN-2011) to the INSDC. RL Crop Protection Division, Agricultural Biology Department, National Academy RL of Agricultural Science, Suwon, Gyeonggi-Do 441-707, Republic of Korea XX DR MD5; 02674eff8d5ba2c674e02e6a94cd8f03. XX FH Key Location/Qualifiers FH FT source 1..3368 FT /organism="Cucumber mosaic virus" FT /segment="RNA1" FT /host="Zea mays (corn)" FT /strain="ZM" FT /mol_type="genomic RNA" FT /country="South Korea" FT /db_xref="taxon:12305" FT gene 96..3077 FT /gene="1a" FT CDS 96..3077 FT /codon_start=1 FT /gene="1a" FT /product="1a protein" FT /db_xref="GOA:G9FLT9" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:G9FLT9" FT /protein_id="AEV40476.1" FT /translation="MATSSFNINELVASHGDKGLLATALVDKAAHEQLEEQLQHQRRGR FT KVYVRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHTERLMNMRKIILNDPQQFDGRQ FT PDFCTHPAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GIIPELNCQWRKIRNAFSETEDVTPLVGKLNSTVFSRVRKFKTLVAFDFINESTMSYVH FT DWENIKSFLTDQTYSYKGMTYGIERCVINAGIMTYKIIGVPGMCPPELIRHCIWFPSIK FT DYVGLKIPASQDLVEWKTVRILTSTLRETEEIAMRCYNDKKAWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYIGFAILLHTKMKYEQLGKMYDMWNASSISKWFAALTR FT PLRVFFSSAVHALFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAYVATQ FT AVTDGKVLAAQKAEKLAEKLAQPVDEVSGSPEVPSSTPDDTADVCGKEQEVSELDSLSA FT QTRSPITRVAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDKRNSLEGNLKFVFD FT TYFTVDPMVNIHFSTGRWMRPVPEGIVYSVGYNERGLGPKSDGELFIVNSECVICNSES FT LSTVTRSLQAPTGTISQVDGVAGCGKTTAIKSIFEPSTDMIVTANKKSAQDVRMALFKS FT SDSKEACTFVRTADSVLLNECPTVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSKIIPDETSDADTTFRSPQDVVPLVRLMATKALPKGTHSKYTKW FT VSQSKVKRSVTSRSIASVTLVDLDSSRFYITMTQADKASLISRAKEMNLPKTFWNERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKQFSYCLVALTRHKVTFRYEYCGVLNGDLIAEC FT IARA" XX SQ Sequence 3368 BP; 852 A; 736 C; 811 G; 969 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaacta ccctttgaaa 60 acctctcatt cttaatcttt tctttgtaaa ttcctatggc gacgtcctcg ttcaacatta 120 atgaattggt agcctcccac ggcgataaag gactactcgc gaccgccctc gttgataagg 180 cagctcatga gcagctcgag gagcaattac agcatcaacg taggggccgt aaggtctacg 240 ttcggaacgt tctgagcgta aaggattccg aagttatccg gaatcggtat ggaggaaagt 300 acgacctcca tcttacccag caggagtttg ctccccacgg cctagctggt gccctccgct 360 tgtgtgaaac tctcgattgt ctagactctt tcccttcttc aggtctgcgg caggacctcg 420 tcttagactt cggaggaagt tgggtcacac attacctccg cggacacaac gtacactgct 480 gttccccttg tttgggtatt cgcgataaaa tgcgccacac ggaacgttta atgaacatgc 540 gcaagatcat cttgaacgat ccacaacagt tcgatggtcg acagccggat ttctgcactc 600 atcctgctgc tgattgcaaa gtacaagccc actttgctat atctattcat ggaggttatg 660 atatgggctt tagaggatta tgtgaagcaa tgaatgccca cggaaccacc attttgaagg 720 gaacgatgat gttcgatggt gcgatgatgt ttgacgacca aggtataatt cccgagctta 780 attgccagtg gaggaagatt aggaacgctt tctctgaaac tgaagacgtc actccgttag 840 ttggtaagct taattccact gtgttttccc gcgtgcgtaa attcaagact ttggtagctt 900 tcgatttcat caacgaatct accatgtctt atgttcatga ttgggagaac ataaaatctt 960 ttctaacgga ccagacctat tcttacaaag gaatgaccta cggtattgaa cgttgtgtca 1020 ttaatgctgg tatcatgacg tataagatta tcggagtacc tgggatgtgt ccacccgaac 1080 ttattcgaca ttgtatttgg ttcccctcta ttaaagacta tgttggtcta aagattcccg 1140 cgtcgcagga cttggttgag tggaaaacag tgcgtatttt aacgtcaaca ttacgtgaaa 1200 ctgaagagat tgctatgagg tgttataatg ataagaaggc gtggatggaa caatttaagg 1260 ttatcttagg tgttctatcc gcgaaatcat ctaccattgt catcaatggt atgtccatgc 1320 aatctggcga acggatagat atcaatgatt atcattacat tggttttgcc attcttcttc 1380 acacaaaaat gaagtacgaa caactaggga aaatgtacga tatgtggaat gcttcgagta 1440 tctcgaagtg gttcgcagcg ttgactcgtc cgctgcgtgt gtttttctct agtgctgttc 1500 acgcgctgtt cccgactttg agaccccgtg aggaaaaaga attcctgatt aagctctcca 1560 ccttcgtaac ttttaatgaa gagtgctcat ttgacggtgg agaggaatgg gacgtgatat 1620 catctgctgc atacgttgct acacaggctg ttactgatgg gaaagttttg gctgcgcaga 1680 aagccgagaa gctcgctgag aagcttgcac aacccgtaga tgaggtatca ggcagccctg 1740 aggtgccatc ttcaacacct gatgatactg ccgatgtttg tggaaaggag caggaagttt 1800 cggaacttga ctcattatcg gctcagacac gttcccccat cactagagtt gctgaaaggg 1860 ctactgccat gctggagtat gccgcttatg agaaacagtt acatgatacc acagtgtcta 1920 atttgaaacg tatttggaat atggcaggcg gtgatgacaa gagaaattcc ctcgaaggta 1980 atttgaaatt tgtttttgac acgtatttca ctgttgaccc catggtgaac attcactttt 2040 cgacggggcg gtggatgcgt cctgtgcctg agggaattgt ctactctgtt ggttataatg 2100 aacgcggttt aggtccgaag tctgatggag agcttttcat tgtcaatagc gagtgtgtga 2160 tatgtaatag tgagtcttta tctactgtta cacgctctct ccaagctcca actggaacca 2220 ttagtcaggt cgacggggtc gccggttgtg ggaagaccac ggcaattaaa tccatttttg 2280 agccgtccac tgacatgatc gttaccgcga acaagaagtc cgcccaagat gtgcgcatgg 2340 cacttttcaa atcgtcagat tccaaagaag catgcacctt tgttcgaaca gctgattctg 2400 tcctacttaa cgaatgtccg actgtgagta gggttttggt tgacgaagtt gtactgctac 2460 attttggtca attgtgtgct gttatgtcta aactgaaggc tgtgcgagct atatgttttg 2520 gggattcgga gcagattgct ttttcttctc gagatgcctc gtttgacatg cgtttctcta 2580 agataattcc tgatgaaact agtgatgcgg acactacatt ccgtagccca caagacgtcg 2640 tgccgcttgt gcgtttgatg gctacgaagg cccttccgaa aggaactcat tcaaaataca 2700 cgaaatgggt ttctcaatct aaagtgaaga gatctgtcac gtcccgttct attgctagcg 2760 tgacattggt tgacctggat tcctctaggt tttacatcac gatgactcaa gctgataaag 2820 cttcactgat ttcaagggcg aaagagatga acttaccgaa gactttctgg aacgaaagga 2880 ttaagaccgt gcatgagtct caaggcattt ctgaagatca tgttactttg gtaagattaa 2940 agagcacaaa gtgtgacctg tttaaacagt tttcctattg tcttgttgcc ttgactagac 3000 acaaggtcac cttccgctac gagtattgtg gtgtattgaa cggcgatttg atcgccgaat 3060 gtattgctcg tgcttagcgg tttccctcct tcgggcggga tctgagttgg cggtaatcta 3120 taaaccgtct gaagtcacta aacgttaacg gtcacgttta cggtgaacgg gttgtccatc 3180 cagcttacgg ctaaaatggt cagtcgtgga gaaatccacg ccagtagact tacaagtctc 3240 tgaggtgcct ttgaaaccat ctcctaggtt tcttcggaag gacttcggtc cgtgtacttc 3300 tagcacaatg tgctagtttc agggtacggg catcccccca ctttgtgggg gcctccaaaa 3360 ggagacca 3368 //