ID JN165088; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC JN165088; XX DT 08-AUG-2011 (Rel. 109, Created) DT 25-AUG-2011 (Rel. 109, Last updated, Version 2) XX DE African cassava mosaic virus-Ghana isolate ACMV segment DNA-A, complete DE sequence. XX KW . XX OS African cassava mosaic virus-Ghana OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Oteng-Frimpong R., Torkpo S.K., Gafni Y., Levy Y., Kwame-Offei S.; RT ; RL Submitted (21-JUN-2011) to the INSDC. RL Plant Sciences, ARO Volcani Center, Derech Hamacabim, Bet Dagan 50520, RL Israel XX DR MD5; 2b4704c32db377aad93aacb2d5e6da7a. XX CC GenBank Accession Numbers JN165086, JN165088 represent the complete CC genome of African cassava mosaic virus-Ghana. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="African cassava mosaic virus-Ghana" FT /segment="DNA-A" FT /host="cassava" FT /isolate="ACMV" FT /ecotype="Ghanian Cassava" FT /mol_type="genomic DNA" FT /country="Ghana" FT /collection_date="2008" FT /db_xref="taxon:1077906" FT gene 191..478 FT /gene="av2" FT CDS 191..478 FT /codon_start=1 FT /gene="av2" FT /product="AV2" FT /db_xref="GOA:G1FC97" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:G1FC97" FT /protein_id="AEL28900.1" FT /translation="MLAIKYLQALEDTYEPSTLGHDLVRDLVSVIRARNYVEATRRYHH FT FHSRLESSSKAELRQPIQEPCNCPHCPRHKSKTGLDEQAHVQKAHDVQDV" FT gene complement(282..998) FT /gene="ac5" FT CDS complement(282..998) FT /codon_start=1 FT /gene="ac5" FT /product="AC5" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:G1FC98" FT /protein_id="AEL28902.1" FT /translation="MPCTKAEHSLCDSHTSLPPDDYMSRDDSTCKTFSPTLLLHARWTT FT NNSGMKFPQHLKPIPQIVLNCCSTGLIIKHVKYLPKVLGRIAIRPSIPKQVEHHIISVI FT LLLNIFIHPDLTKNVYGLDTKPLSDPVCQPRPTCHITNHLTDTKVLHIIPLLKRLDLTW FT AFTAPRYVWASIHPVHHGLSVHGPVHPGPFSICDVDSGGSCTVPVWAVEVQPSTNFRAW FT SGNDDISWSLRHNYAP" FT gene 297..899 FT /gene="av1" FT CDS 297..899 FT /codon_start=1 FT /gene="av1" FT /product="AV1" FT /note="capsid protein" FT /db_xref="GOA:G1FC99" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:G1FC99" FT /protein_id="AEL28901.1" FT /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW FT MNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH FT RVGKRFCIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNTPQDFGQIFNMFDN FT EPSTATIKNDLRDRFQVLRKFHATVIGGPSGMKEQRW" FT gene complement(1069..1473) FT /gene="ac3" FT CDS complement(1069..1473) FT /codon_start=1 FT /gene="ac3" FT /product="AC3" FT /db_xref="GOA:G1FCA0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:G1FCA0" FT /protein_id="AEL28903.1" FT /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHQQRPFLLNQDI FT ITVQVRFNHNLRKELGIHQCFLNFRIWTTLRPRTGLFLRVFRYQVLKYLDNMGVISINN FT VIRAAAHVLFNVIDKTLDCQMTHEIKFNVY" FT gene complement(1214..1621) FT /gene="ac2" FT CDS complement(1214..1621) FT /codon_start=1 FT /gene="ac2" FT /product="AC2" FT /db_xref="GOA:G1FCA1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:G1FCA1" FT /protein_id="AEL28904.1" FT /translation="MQSSSPSQNHSTQVPIKVSHRQFKKRAIRRRRVDLVCGCSYYLHI FT NCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNHQAPTTTIPAEPGHHNSPGSIQSQ FT PAEGAGDSPMFSQLQDLDDLTASDWSFLKSL" FT gene complement(1530..2606) FT /gene="ac1" FT CDS complement(1530..2606) FT /codon_start=1 FT /gene="ac1" FT /product="AC1" FT /db_xref="GOA:G1FCA2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:G1FCA2" FT /protein_id="AEL28905.1" FT /translation="MRTPRFRVQAKNVFLTYPKCSIPKEHLLSFLQTLSLPSNPKFIKI FT CRELHQNGEPHLHALIQFEGKITITNNRLFDCIHPSCSTNFHPNIQGAKSSSDVKSYLD FT KDGDTVEWGQFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELVPKDFVLQFHN FT LNSNLDRIFQEPPAPYVSPFPCSSFDQVPDELEEWVADNVRDSAARPWRPNSIVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPKVFNNAAWYNVIDDVDPHYLKHFKEFMGSQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEDKQEALKAWALKNAIFITLTEPLY FT SGSNQSQSQTIQEASHPA" FT gene complement(2162..2701) FT /gene="ac4" FT CDS complement(2162..2701) FT /codon_start=1 FT /gene="ac4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:G1FCA3" FT /protein_id="AEL28906.1" FT /translation="MPFRDTYIMSPINRRRCSRVSLVECLQLTWSKCELLVLEFKPRMS FT FSHTLSVLYQKNTCCHSFKHYLSHQTLSSLKSVESCIRMGNLTCMPSSNSREKSRLRTI FT VSSIVYIPAVAPISTPTFKVPNQVQMSSPIWIRTETPSNGDNFRSMDDLLEAVNNQRMM FT LTPKRLTAAVSQKLLM" XX SQ Sequence 2781 BP; 759 A; 560 C; 679 G; 783 T; 0 other; accggttggc cccgcccccc tttaaacgtg gtccccgcgc actacttatg tcggccaatc 60 atgctgtagc gttaaaggtt atttattagt ggtggaccac tatatactta caggcgaagt 120 tgttgctagt gcgcaatgtg ggatcccact ggtgaatgag tttccagact cggtgcatgg 180 gcttaggtgt atgcttgcaa ttaaatattt gcaggcccta gaggatacat acgagcccag 240 tacgttgggc cacgatctgg ttagagatct agtctcagtt atcagggcgc gtaattatgt 300 cgaagcgacc aggagatatc atcatttcca ctccaggctc gaaagttcgt cgaaggctga 360 acttcgacag cccatacagg aaccgtgcaa ctgcccccac tgtccacgtc acaaatcgaa 420 aacgggcctg gatgaacagg cccatgtaca gaaagcccat gatgtacagg atgtatagaa 480 gcccagacat acctaggggc tgtgaaggcc catgtaaggt ccaatcgttt gagcagaggg 540 atgatgtgaa gcaccttggt atctgtaagg tgattagtga tgtgacacgt gggcctgggc 600 tgacacacag ggtcggaaag aggttttgta tcaagtccat atacattctt ggtaagatct 660 ggatggatga aaatattaag aagcagaatc acactaataa tgtgatgttc tacctgctta 720 gggatagaag gccttatggc aatacgcccc aagactttgg gcagatattt aacatgtttg 780 ataatgagcc cagtactgca acaattaaga acgatttgag ggataggttt caggtgttga 840 ggaaatttca tgccactgtt attggtggtc catctggcat gaaggagcag cgttggtgaa 900 aaggttttac aggttgaatc atcacgtgac atataatcat caggaggcag ggaagtatga 960 gaatcacaca gagaatgctc tgcttttgta catggcatgt actcatgcct ccaatcctgt 1020 atatgctacg ttgaaaatac gtatatactt ctatgacagt attggcaatt aataaacatt 1080 gaattttatt tcatgagtca tctgacagtc aagagttttg tcaattacat tgaacaaaac 1140 atgagcagca gctctaatta cattgttaat tgaaataaca cccatattat ccaagtattt 1200 aagtacttgg tatctaaaga ctcttaagaa aagaccagtc cgaggccgta aggtcgtcca 1260 gatcctgaag ttgagaaaac attggtgaat ccccagctcc ttccgcaggt tgtgattgaa 1320 tcgaacctgg actgttatga tgtcctggtt cagcaggaat ggtcgttgtt ggtgcctggt 1380 gattgtgaaa tacaggggat tgtttatttc ccaggtatac acgccattca ttgcttgagg 1440 agcagtgatg agttcccctg tgcgtaaatc catgattgga gcagttgata tggaggtaat 1500 aggaacagcc acagacaaga tccactctcc tacgccggat ggctcgcttc ttgaattgtc 1560 tgtgactgac tttgattgga acctgagtag agtggttctg tgagggtgat gaagattgca 1620 ttctttaatg cccaggcctt tagcgcttct tgcttatcct cgtctaggaa ctctttatag 1680 gacgaggtag gacctggatt gcagaggaag atagtgggaa tgccaccttt aatttgaacg 1740 ggtttcccgt atttcgtgtt ggactgccag tccctttggg accccatgaa ttccttaaag 1800 tgctttaggt agtggggatc gacgtcatca atgacgttgt accaggcagc attattgaag 1860 acctttggac taaggtccag atgtccacac aggtaattgt gtgggcctaa agatctggcc 1920 cacatcgtct tccctgttct gctatcacct tctattacaa tactattggg tctccatggc 1980 cgcgcagcgg aatctctaac attatcagcg acccattctt caagttcatc aggaacttgg 2040 tcaaaggaag aacatgggaa gggagaaaca taaggagcag gtggctcctg gaaaatccta 2100 tctaaattac tatttagatt atgaaactga agtacaaagt cctttgggac taattcccta 2160 attacattaa gagcttctga cttactgccg ctgttaagcg ctttggcgta agcatcattc 2220 gctgattgtt gaccgcctct agcagatcgt ccatcgatct gaaattgtcc ccattcgacg 2280 gtgtctccgt ccttatccag ataggacttg acatctgaac ttgatttggc accttgaatg 2340 ttggggtgga aattggtgct acagctggga tgtatacaat cgaagagacg attgttcgta 2400 atcgtgattt ttccctcgaa ttggatgagg gcatgcaagt gaggttcccc attctgatgc 2460 agctctctac agattttaat gaacttaggg tttgatggga gagatagtgt ttgaaggaat 2520 gacagcaggt gttcttttgg tatagaacac ttagggtatg tgagaaagac attcttggct 2580 tgaactctaa aacgaggagt tcgcattttg accaagtcaa ttggagacac tcaactagag 2640 acactcttga gcatctcctc ctattaattg gagacattat ataggtgtct ctaaatggca 2700 ttcttgtaat aagttgaact ttaatttgaa tgaaaaggct caaaaggcgc agaacaccca 2760 aggggccaac cgtataatat t 2781 //