ID JN135234; SV 2; circular; genomic DNA; STD; VRL; 2740 BP. XX AC JN135234; XX DT 18-DEC-2011 (Rel. 111, Created) DT 15-JAN-2013 (Rel. 115, Last updated, Version 3) XX DE Pepper leaf curl Lahore virus isolate Lucknow segment DNA-A, complete DE sequence. XX KW . XX OS Pepper leaf curl Lahore virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RA Raj S.K., Srivastava A., Snehi S.K.; RT "Pepper leaf curl Lahore virus associated with leaf curl disease in Tomato RT in India"; RL Unpublished. XX RN [2] RP 1-2740 RA Raj S.K., Srivastava A., Snehi S.K.; RT ; RL Submitted (17-JUN-2011) to the INSDC. RL Plant Molecular Virology, National Botanical Research Institute, RL Lucknow-226001, Rana Pratap Marg, Lucknow, U.P. 226001, India XX RN [3] RC Sequence update by submitter RP 1-2740 RA Raj S.K., Srivastava A., Snehi S.K.; RT ; RL Submitted (14-JAN-2013) to the INSDC. RL Plant Molecular Virology, National Botanical Research Institute, RL Lucknow-226001, Rana Pratap Marg, Lucknow, U.P. 226001, India XX DR MD5; b39e95d499d949d8322e6d5df4dcfff8. XX CC On Jan 14, 2013 this sequence version replaced gi:359828303. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Pepper leaf curl Lahore virus" FT /segment="DNA-A" FT /host="Solanum lycopersicum (tomato)" FT /isolate="Lucknow" FT /mol_type="genomic DNA" FT /country="India" FT /collected_by="Ashish Srivastava" FT /collection_date="03-Feb-2011" FT /db_xref="taxon:884610" FT gene 145..510 FT /gene="AV2" FT CDS 145..510 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:G9FJA4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:G9FJA4" FT /protein_id="AEV76907.2" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL FT ISVIRARNYVQATSRYNHFHDRLEGTPPSQLRQPLCQPCCCPHCPRHKGQSMGEQAHEQ FT EAQDVQDVQKPRCSKGL" FT gene 305..1075 FT /gene="AV1" FT CDS 305..1075 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:G9FJA5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:G9FJA5" FT /protein_id="AEV76908.1" FT /translation="MSKRPADIIISTTASKVRRRLNFDSPYASRAAAPTVRVTKARAWV FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVSN" FT gene complement(1072..1476) FT /gene="AC3" FT CDS complement(1072..1476) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:G9FJA6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:G9FJA6" FT /protein_id="AEV76909.2" FT /translation="MDSRTGELITAAQAMNGVYTWEVPNPLYFKIIDHSSRPSLMEHDI FT ITVQIRSNHNLRKALGMHKCFLVYRIWMTSQPQTLRFLRVFRYQVLRYLDMLGVICINT FT VVRAVEHVLYSVLTGTNHVEQSNLIKFKIY" FT gene complement(1217..1621) FT /gene="AC2" FT CDS complement(1217..1621) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional transactivator protein" FT /db_xref="GOA:G9FJA7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:G9FJA7" FT /protein_id="AEV76910.1" FT /translation="MRPSSPSTGHSTPVPIKVQHRAAKKRNRRRRVDLNCGCSYYVALN FT CHNHGFTHRGTHHCSSGDEWRLYLGGSKSPLFQDHRPQQPAVPDGTRHNNRPDTVQPQP FT EESVGDAQMFSSLPNLDDFTASDLAFLEGF" FT gene complement(1524..2609) FT /gene="AC1" FT CDS complement(1524..2609) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:G9FJA8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:G9FJA8" FT /protein_id="AEV76911.1" FT /translation="MPRLNSFCVNAKNIFLTYPKCPIPKEQMLEILQSINCPSDKLFIR FT VAQEKHQDGSLHIHALIQFKGKSKFRNPRHFDVTHPNNSTQFHPNFQGAKSSSDVKSYI FT EKDSDYIDWGQFQIDGRSARGGQQTANDAAAEALNAGSAEAALAIIREKLPKDFIFQYH FT NLKCNLDRIFTPPVEVYVSPFLSSSFDQVPEELEEWAVENVMVAAARPLRPMSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPRVYRNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCDPGPNSSYKEFLDEPKNTALKAWAIRNATFISLDGPL FT YSSADQGSTQGSQEEEQTSSC" FT gene complement(2195..2452) FT /gene="AC4" FT CDS complement(2195..2452) FT /codon_start=1 FT /gene="AC4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:G9FJA9" FT /protein_id="AEV76912.1" FT /translation="MGLCISMPSSSSKVNPSSETPDISMSLTLITPPNSTQTSRELSPA FT LMSSPTSRRTVITSTGVSFRSMEDLLEEVNRQLMMQQQRP" XX SQ Sequence 2740 BP; 738 A; 576 C; 649 G; 777 T; 0 other; accggatggc cgcgaaaaaa attaatggac cccacaaagc actaactgac aaagacatct 60 ccaccaatga aaagagctcc tcaaagctta attgttatgt ggtcccctat ttaaacttcg 120 tcaccaagta gtgcatagtg cactatgtgg gatccattac tgaacgagtt tcccgaaacc 180 gttcacggtt ttagatgtat gttagcagtt aaatatctgc aattagtaga gaagacttat 240 tctccagata cattagggca tgatttaatt agggatttaa tttcagttat cagggctagg 300 aattatgtcc aagcgaccag cagatataat catttccacg accgcctcga aggtacgccg 360 ccgtctcaac ttcgacagcc cttatgccag ccgtgctgct gcccccactg tccgcgtcac 420 aaaggccaga gcatgggtga acaggcccat gaacaggaag cccaggatgt acaggatgta 480 cagaagccca gatgttccaa ggggttgtga aggcccatgt aaggtccagt cttttgagtc 540 tagacatgat gtagttcata tagggaaggt gatgtgtatt agtgatgtta cccgtggtac 600 tgggttaacc catagagtag gtaagcgttt ctgtgttaag tctgtgtatg tattagggaa 660 gatatggatg gatgagaata tcaagactaa gaatcacacg aatagtgtga tgtttttcct 720 tgtccgtgat cgtcgtcctg ttgataaacc acaagatttt ggagaggtgt tcaacatgtt 780 tgacaacgag cctagcactg ccactgtgaa gaatatgcat agagatcgtt atcaggtttt 840 gaggaaatgg cacgcaacgg ttactggtgg acagtacgcg tcgaaggaac aggcattagt 900 gaagaagttc gttagggtta ataattatgt tgtgtataac cagcaggaag ctggtaaata 960 tgagaatcat actgagaatg cattgatgtt gtacatggcg tgtactcacg cctctaatcc 1020 cgtgtatgct accttaaaga tacggatcta tttctatgat tcagtatcaa attaataaat 1080 tttaaatttt attaaatttg actgctcaac atgattcgtc cctgtgagta cactgtacaa 1140 tacatgctct acggctctaa cgaccgtatt tatacatatg acccctaaca tgtccaggta 1200 tctgagtacc tggtacctaa aaaccctcaa gaaacgcaag gtctgaggct gtgaagtcat 1260 ccagattcgg tagactagaa aacatttgtg catccccaac gctttcctca ggttgtggtt 1320 ggaccgtatc tggacggtta ttatgtcgtg ttccatcagg gacggccggc tgctgtggtc 1380 tatgatcttg aaatagaggg gatttggaac ctcccaggta tagacgccat tcatcgcctg 1440 agctgcagtg atgagttccc ctgtgcgtga atccatggtt gtggcagttg agtgctacgt 1500 agtacgagca cccgcagttg aggtcaacac gacgacgtct gttcctcttc ttggctgccc 1560 tgtgttgaac cttgatcggc actggagtag agtggcccgt cgagggagat gaaggtcgca 1620 tttcttattg cccaagcctt caatgccgta ttcttcggct cgtcaaggaa ctctttatag 1680 ctggaattgg gcccaggatc gcacaggaag atagtgggta tcccaccttt aatttgaact 1740 ggctttccgt atttggtgtt gctttgccag tccctctggg cccccatgaa ttccttgaag 1800 tgctttaggt agtggggatc tacgtcatca atgacgttgt accacgcgtc gtttctgtag 1860 accctaggac tcaagtccag atggccacat agataattat gtggacccaa agacctagcc 1920 cacattgtct ttcccgttct actatcaccc tctatgacaa tactcatggg cctcaaaggc 1980 cgcgcagcgg caaccattac attctcaaca gcccattctt caagttcttc agggacttga 2040 tcaaaagaag aagataaaaa aggagaaaca taaacctcaa caggaggtgt aaaaatccta 2100 tctaaattac attttaaatt atgatattga aaaataaaat ctttagggag tttttcccta 2160 attattgcta aggctgcttc agctgaacct gcatttaggg cctctgctgc tgcatcatta 2220 gctgtctgtt gacctcctcg agcagatctt ccatcgatct gaaactgacc ccagtcgatg 2280 taatcactgt ccttctcgat gtaggacttg acatcagagc tggacttagc tccctggaag 2340 tttgggtgga attgggtgga gttattaggg tgagtgacat cgaaatgtct ggggtttctg 2400 aacttggatt tacctttgaa ctggatgagg gcatggatat gcagagaccc atcttggtgt 2460 ttttcttgtg ccactctgat aaataattta tcagatgggc aatttattga ctgaagaatc 2520 tcgagcattt gctctttggg tattgggcat tttggataag tgaggaagat atttttggca 2580 ttaacacaaa aggagttaag acgaggcata ttgaattggg gacactcaaa actctgagga 2640 atgggggaca ttggggacgc atttatatgg cgtcccccaa tggctttttc gtaatttgca 2700 caactttaat tcaaataccc gataatcgcg gccatccgta 2740 //