ID   JN133282; SV 1; circular; genomic DNA; STD; VRL; 993 BP.
XX
AC   JN133282;
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DT   02-JUL-2012 (Rel. 113, Created)
DT   02-JUL-2012 (Rel. 113, Last updated, Version 1)
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DE   Pea necrotic yellow dwarf virus segment DNA-N, complete sequence.
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KW   .
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OS   Pea necrotic yellow dwarf virus
OC   Viruses; Nanoviridae; Nanovirus.
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RN   [1]
RP   1-993
RA   Grigoras I., Gronenborn B., Vetten H.-J.;
RT   "Pea necrotic yellow dwarf virus";
RL   Unpublished.
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RN   [2]
RP   1-993
RA   Grigoras I.;
RT   ;
RL   Submitted (18-JUN-2011) to the INSDC.
RL   Institut des Sciences du Vegetal, Centre National de la Recherche
RL   Scientifique, Gif sur Yvette 91198, France
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DR   MD5; 53923ca503da86d7c690d41b8fb2665d.
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FH   Key             Location/Qualifiers
FH
FT   source          1..993
FT                   /organism="Pea necrotic yellow dwarf virus"
FT                   /segment="DNA-N"
FT                   /host="Pisum sativum"
FT                   /strain="Germany"
FT                   /isolate="Drohndorf-15"
FT                   /mol_type="genomic DNA"
FT                   /country="Germany:Drohndorf"
FT                   /isolation_source="plant tissue"
FT                   /collected_by="H.-J. Vetten"
FT                   /collection_date="01-Jul-2009"
FT                   /identified_by="I. Grigoras and H.-J. Vetten"
FT                   /db_xref="taxon:753670"
FT   stem_loop       join(973..993,1..14)
FT                   /note="part of replication origin"
FT   misc_feature    join(987..993,1..2)
FT                   /note="conserved nonanucleotide at replication origin"
FT   regulatory      289..295
FT                   /regulatory_class="TATA_box"
FT   CDS             331..792
FT                   /codon_start=1
FT                   /product="putative nuclear shuttle protein"
FT                   /db_xref="InterPro:IPR008706"
FT                   /db_xref="UniProtKB/TrEMBL:I6QAH4"
FT                   /protein_id="AFK65514.1"
FT                   /translation="MGDWFASPLKTCSHVLDFPSLAGNPQQAFRCCDTMKGKLEEPRKV
FT                   LLASCSVSFNGSFYGGNRNVRGRIQISMLEDDGVFRPIGFLPIGGYLYHNDYGYYEGQK
FT                   TFMLEMESPYLRKDEDYERPFTVTVINDNGLDVSCDLKVVVVHTMRIKV"
FT   regulatory      805..814
FT                   /regulatory_class="polyA_signal_sequence"
XX
SQ   Sequence 993 BP; 265 A; 182 C; 231 G; 315 T; 0 other;
     acccccgtgc caggatcagg ggatcacttt aaatacatct cgaccgttca tttgaatgac        60
     acgtgtatgc tcaagattaa ttcttgagtg ggaagggaat ataaggcttt taaaatacta       120
     attcattaaa tgacgtggac aattcttatt ggttgatagt tagtgcgtta ctttccaatg       180
     gtttgctttc catcgcacta acttagcgtg tccgagacgc gtaattatgc ttgggcccaa       240
     agtaaagcac agtgcttctt ctttccagga agcttcctgg aattctatta taaataggac       300
     atcatcgtct tcatttttca tatcagaaaa atgggtgact ggtttgcgag tccgcttaaa       360
     acatgttctc atgttttaga tttcccgagt ctcgctggaa atcctcaaca ggctttcagg       420
     tgttgtgaca ccatgaaagg taaattggaa gaacccagga aggtgttgct tgcaagttgc       480
     agtgtcagtt ttaatggaag cttctacggc ggtaaccgga atgttcgcgg acgaattcag       540
     atatctatgt tggaagacga cggcgtcttc cggccaatcg gatttcttcc aatcggtgga       600
     tacctgtatc ataacgacta tgggtattat gaaggtcaga agaccttcat gctggagatg       660
     gagtcgccat acttgaggaa ggatgaagac tacgaaaggc ctttcactgt aaccgttatc       720
     aatgataacg gattagatgt atcttgtgac ctcaaggttg ttgttgtaca tacgatgcgt       780
     atcaaggtgt aattcatgat tattaataaa taaatattta tttatgtttg tttaatactc       840
     ttgctattgt ttttaaattc cacgcgaagc ggtatgcttt gggctggaag gcccaataag       900
     gacttaggcc caattttatt tgtgttgttg ggatcaaata gtgtcatttg gcactatttg       960
     atcccgggac agcctggcac ggggcttagt att                                    993
//