ID   JN133281; SV 1; circular; genomic DNA; STD; VRL; 988 BP.
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AC   JN133281;
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DT   02-JUL-2012 (Rel. 113, Created)
DT   02-JUL-2012 (Rel. 113, Last updated, Version 1)
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DE   Pea necrotic yellow dwarf virus segment DNA-M, complete sequence.
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KW   .
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OS   Pea necrotic yellow dwarf virus
OC   Viruses; Nanoviridae; Nanovirus.
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RN   [1]
RP   1-988
RA   Grigoras I., Gronenborn B., Vetten H.-J.;
RT   "Pea necrotic yellow dwarf virus";
RL   Unpublished.
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RN   [2]
RP   1-988
RA   Grigoras I.;
RT   ;
RL   Submitted (18-JUN-2011) to the INSDC.
RL   Institut des Sciences du Vegetal, Centre National de la Recherche
RL   Scientifique, Gif sur Yvette 91198, France
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DR   MD5; 48d6d36aa532c7916bab3fcb7e1812a5.
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FH   Key             Location/Qualifiers
FH
FT   source          1..988
FT                   /organism="Pea necrotic yellow dwarf virus"
FT                   /segment="DNA-M"
FT                   /host="Pisum sativum"
FT                   /strain="Germany"
FT                   /isolate="Drohndorf-15"
FT                   /mol_type="genomic DNA"
FT                   /country="Germany:Drohndorf"
FT                   /isolation_source="plant tissue"
FT                   /collected_by="H.-J. Vetten"
FT                   /collection_date="01-Jul-2009"
FT                   /identified_by="I. Grigoras and H.-J. Vetten"
FT                   /db_xref="taxon:753670"
FT   stem_loop       join(968..988,1..14)
FT                   /note="part of replication origin"
FT   misc_feature    join(982..988,1..2)
FT                   /note="conserved nonanucleotide at replication origin"
FT   regulatory      237..243
FT                   /regulatory_class="TATA_box"
FT   CDS             295..654
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:I6QHN8"
FT                   /db_xref="UniProtKB/TrEMBL:I6QHN8"
FT                   /protein_id="AFK65513.1"
FT                   /translation="MSQPGDYGEYPSYEAMDSEKRHQALYIIGICLLIIICIVVLWVCI
FT                   MLACWIPGFLKKTLDAWLGSSSMMKRKVASTITRTPLEFTGPNRERNWDIRREASNSVP
FT                   ERPVSSSVPPSGGMI"
FT   regulatory      703..708
FT                   /regulatory_class="polyA_signal_sequence"
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SQ   Sequence 988 BP; 273 A; 161 C; 234 G; 320 T; 0 other;
     acccccgtgc caggatcagg ggatcacttt aaatacatct tgaccgttca tttaaacgac        60
     acgtgtatgc tcaagattaa gtcttgagtt tgaaggcggg aaaaactaat tcaaaagatg       120
     ctttgcttcg cctcgaagca aagatggtcc cacttacgca agtggacgcc gatagtgcgc       180
     ttactttcct aatgttttct gagaagcttt tggaagaagc ttctctggaa tttgtctata       240
     aatacgcaag cttcgtttgc gattggattc atttggtttt attatttttg ggcgatgtcg       300
     caacctggag attatggaga gtacccatca tatgaagcta tggattcgga gaagaggcat       360
     caggcgttat acataatagg tatatgttta ttaattatca tatgtatagt tgttctctgg       420
     gtttgtatta tgcttgcgtg ttggattcct gggtttttga agaaaacgct ggatgcgtgg       480
     ttgggttctt catctatgat gaagaggaag gttgcttcaa caattacaag aactccgctt       540
     gaatttactg gtccaaatag ggagagaaat tgggatatta gacgagaggc aagtaattca       600
     gtacctgaac gtcctgtatc ttcatcagtt cctccgtcag gaggaatgat ttaggattta       660
     ggttgttcta ttgtaataac aaaaattgta ttctgatata tgaataaatg gaaatttact       720
     atatttttgt tatttattgt gttatgttta ttttattgtg tgaccggcga agaagacgat       780
     gaatagggat tatggaagac ggacaggtgt ccttcacaca tctcaacaac gacacttgcg       840
     ttgattttaa aatacatcgc gaagctatat gctttgggcc ggaaggccca ataaggactt       900
     aggcccaatt attaattggg tattgggatc aaatagtgtc atttggcact atttgatccc       960
     gggacagcct ggcacggggc ttagtatt                                          988
//