ID   JN132428; SV 1; linear; genomic RNA; STD; VRL; 1191 BP.
XX
AC   JN132428;
XX
DT   02-JAN-2012 (Rel. 111, Created)
DT   16-MAR-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Papaya ringspot virus W isolate B5 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus W
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1191
RX   PUBMED; 22160129.
RA   Abdalla O.A., Ali A.;
RT   "Genetic diversity in the 3'-terminal region of papaya ringspot virus
RT   (PRSV-W) isolates from watermelon in Oklahoma";
RL   Arch. Virol. 157(3):405-412(2012).
XX
RN   [2]
RP   1-1191
RA   Mohammad O., Ali A.;
RT   ;
RL   Submitted (17-JUN-2011) to the INSDC.
RL   Biological Science, University of Tulsa, 800 S Tucker Dr, Tulsa, OK 74104,
RL   USA
XX
DR   MD5; 1d8bc80da18662eff42a9893435b1f77.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1191
FT                   /organism="Papaya ringspot virus W"
FT                   /host="watermelon"
FT                   /isolate="B5"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Oklahoma"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:12207"
FT   CDS             <1..1173
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:G9FIT4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:G9FIT4"
FT                   /protein_id="AEW91864.1"
FT                   /translation="AAMIESWGYGELTHQIRRFYQWVLEQAPFNELAKQGRAPYVSEVG
FT                   LRRLYTSERGSMDELEAYIDKYFERERGDSPELLVYHESRSADDYQLVCSNNTHVFHQS
FT                   KNEAVDAGLNEKLKEKERQKEKEKEKQKEKEKDDASDGNDVSTSTKTGERDRDVNVGTS
FT                   GTFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPQQIDISNTRATQSQFEKWYEGVR
FT                   NDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVDYPIKPLIEHATPSFR
FT                   QIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYEVNSKTPDRAREA
FT                   HMQMKAAALRNTNRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLGMRN"
FT   mat_peptide     <1..309
FT                   /product="NIb protein"
FT   mat_peptide     310..1170
FT                   /product="coat protein"
XX
SQ   Sequence 1191 BP; 406 A; 203 C; 294 G; 288 T; 0 other;
     gcagcaatga tagagtcatg gggttatggt gagttaacac accagattcg tagattctac        60
     caatgggttc tcgagcaagc tccattcaac gagttagcga agcaaggaag ggctccatat       120
     gtctcggaag taggattgag aagattgtac acaagtgaac gcggatcaat ggatgaatta       180
     gaagcgtata tagataaata ctttgagcgt gagaggggag actcacccga actactggta       240
     taccatgagt caaggagcgc tgatgattat caacttgttt gtagcaacaa tacacacgtg       300
     tttcatcagt ctaaaaatga agctgtggac gctggtttga acgaaaagct caaagaaaaa       360
     gaaagacaaa aagaaaaaga aaaagaaaaa caaaaagaga aagaaaaaga cgatgctagt       420
     gacggaaatg atgtgtcaac tagcacaaaa actggagaga gagatagaga tgtcaatgtt       480
     gggaccagtg gaactttcac tgttccaaga atcaaatcat tcactgacaa gatgatttta       540
     ccaagaatta agggaaagac tgtccttaat ttgaatcatc ttcttcagta taatccgcaa       600
     caaattgaca tttctaatac tcgtgccact cagtcacaat ttgagaagtg gtatgaggga       660
     gtgaggaatg attatggcct taatgataat gaaatgcaag tgatgttaaa tggcttgatg       720
     gtttggtgta tcgagaatgg tacatctcca gacatatctg gtgtctgggt tatgatggat       780
     ggggaaaccc aagttgatta tccaatcaag cctttaattg agcatgctac tccgtcattt       840
     aggcaaatta tggctcactt tagtaacgcg gcagaagcat acattgcgaa gagaaatgct       900
     actgagaggt acatgccgcg gtatggaatc aagagaaatt tgactgacat tagcctcgct       960
     agatatgctt tcgatttcta tgaggtgaat tcgaaaacac ctgatagggc tcgcgaagca      1020
     cacatgcaga tgaaagctgc agcgctgcga aacactaatc gcagaatgtt tggtatggac      1080
     ggcagtgtta gtaacaagga agaaaacacg gagagacaca cagtggaaga tgtcaataga      1140
     gacatgcact ctctcctggg tatgcgcaac tgaatactcg cgcttgtgtg t               1191
//