ID   JN132408; SV 1; linear; genomic RNA; STD; VRL; 1191 BP.
XX
AC   JN132408;
XX
DT   02-JAN-2012 (Rel. 111, Created)
DT   16-MAR-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Papaya ringspot virus W isolate A1a polyprotein gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus W
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1191
RX   PUBMED; 22160129.
RA   Abdalla O.A., Ali A.;
RT   "Genetic diversity in the 3'-terminal region of papaya ringspot virus
RT   (PRSV-W) isolates from watermelon in Oklahoma";
RL   Arch. Virol. 157(3):405-412(2012).
XX
RN   [2]
RP   1-1191
RA   Mohammad O., Ali A.;
RT   ;
RL   Submitted (17-JUN-2011) to the INSDC.
RL   Biological Science, University of Tulsa, 800 S Tucker Dr, Tulsa, OK 74104,
RL   USA
XX
DR   MD5; c0ebc9e0e13d1f124d6527c8c215f138.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1191
FT                   /organism="Papaya ringspot virus W"
FT                   /host="watermelon"
FT                   /isolate="A1a"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Oklahoma"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:12207"
FT   CDS             <1..1173
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:G9FIR4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:G9FIR4"
FT                   /protein_id="AEW91844.1"
FT                   /translation="AAMIESWGYGELTHQIRRFYQWVLEQAPFNELAKQGRAPYVSEVG
FT                   LRRLYTSERGSMDELEAYIDKYFERERGDSPELLVYHESRSTDDYQLVCSNNTHVFHQS
FT                   KNEAVDAGLNEKLKEKEKLKEKEKEKQKEKGKDDASDGNDVSTSTKTGERDRDVNVGTS
FT                   GTFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPQQIDISNTRATQSQFEKWYEGVR
FT                   NDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVDYPIKPLIEHATPSFR
FT                   QIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYEVNSKTPDRAREA
FT                   HMQMKAAALRNTSRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLGMRN"
FT   mat_peptide     <1..309
FT                   /product="NIb protein"
FT   mat_peptide     310..1170
FT                   /product="coat protein"
FT   3'UTR           1174..>1191
XX
SQ   Sequence 1191 BP; 400 A; 213 C; 295 G; 283 T; 0 other;
     gcagcaatga tagagtcatg gggctatggt gagttaacac accagattcg cagattctac        60
     caatgggttc tcgagcaagc tccattcaat gagttagcga aacaaggaag ggctccatac       120
     gtctcggaag ttggattgag aagattatac acaagtgaac gtggctcaat ggatgaattg       180
     gaagcgtata tagataaata ctttgagcgt gagaggggag actcacccga actactggtg       240
     taccatgaat cgagaagcac tgatgattat cagcttgttt gtagcaacaa tacacacgta       300
     tttcatcagt ccaaaaatga agctgtggat gctggtttga atgaaaagct caaagaaaaa       360
     gaaaaactga aagaaaaaga aaaagaaaaa caaaaagaga aaggaaaaga cgatgctagt       420
     gacggaaatg atgtgtcaac tagcacaaaa actggagaga gagatagaga tgtcaatgtt       480
     gggaccagtg gaactttcac tgttccaaga attaaatcat ttactgacaa gatgattcta       540
     ccaagaatta aaggaaagac tgtccttaac ttaaatcatc ttcttcagta taatccgcaa       600
     caaatcgaca tttctaatac tcgtgccact cagtcacaat ttgagaagtg gtatgagggg       660
     gtgaggaatg attatggcct taatgataat gaaatgcaag tgatgctaaa tggcttgatg       720
     gtctggtgca tcgagaacgg tacgtcccca gacatatctg gtgtttgggt tatgatggat       780
     ggggagaccc aagttgatta tccaatcaag cctctaattg agcatgctac cccgtcattt       840
     aggcaaatta tggctcactt tagtaacgcg gcagaagcat acattgcaaa gaggaatgct       900
     actgagaggt acatgccgcg gtatggaatc aagagaaatc tgactgacat tagcctcgct       960
     agatacgctt tcgatttcta tgaggttaat tcgaaaacac ctgatagggc tcgcgaagct      1020
     cacatgcaga tgaaggctgc agcgctgcga aacactagtc gcagaatgtt tggtatggac      1080
     ggcagtgtta gtaacaagga agaaaacacg gagagacaca cagtggaaga tgtcaataga      1140
     gacatgcact ctctcctggg tatgcgcaac tgaatactcg cgcttgtgtg t               1191
//