ID   JN127343; SV 1; linear; genomic RNA; STD; VRL; 2113 BP.
XX
AC   JN127343;
XX
DT   02-DEC-2011 (Rel. 111, Created)
DT   24-FEB-2012 (Rel. 111, Last updated, Version 2)
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DE   Onion yellow dwarf virus isolate Bate7 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-2113
RX   DOI; 10.1007/s00705-011-1166-x.
RX   PUBMED; 22075920.
RA   Wylie S.J., Luo H., Li H., Jones M.G.;
RT   "Multiple polyadenylated RNA viruses detected in pooled cultivated and wild
RT   plant samples";
RL   Arch. Virol. 157(2):271-284(2012).
XX
RN   [2]
RP   1-2113
RA   Wylie S.J.;
RT   ;
RL   Submitted (07-JUN-2011) to the INSDC.
RL   Plant Virus Group, WA State Agricultural Biotechnology Centre, Murdoch
RL   University, South Street, Perth, WA 6150, Australia
XX
DR   MD5; f91637350654dcd207287ddcfb38a660.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2113
FT                   /organism="Onion yellow dwarf virus"
FT                   /host="Allium sativum"
FT                   /isolate="Bate7"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /collected_by="S. Wylie"
FT                   /collection_date="01-Nov-2010"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..2113
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:G9FIG7"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:G9FIG7"
FT                   /protein_id="AEN25482.1"
FT                   /translation="FTKYSSVIETGSVDTDMFEASIVDVVEILKKGGMDQCNYVTDTME
FT                   IINSLNMKAAVGALYGGKKKDYFAEYEETDYDRILEASCKRLYLGKMGVWNGSLKAEIR
FT                   SVEKIALNKTRSFTAAPIETLLGGKVCVDDFNNKFYSCNLSIPSTVGITKFYRGWHKML
FT                   SALPDNWIYCDADGSRFDSSLTPYLLNAVLSVRLDFMEPWDIGEKMLSNLYTEIIYTAI
FT                   ATPDGSVIKKFKGNNSGQPSTVVDNTIMVMLSVQYALRKCGVEISKQNEIIKYFCNGDD
FT                   LLIAVHPDYEHMLDHFKQYFHELGLDYDFSSRHKSKEDVYFMSHRGLLRDGIYIPKLDK
FT                   ERIVSILEWDRADKPEHRMEAICASMIEAWGYSDLVHEIRKFYQWLLEQAPYNVIAQSG
FT                   KAPYIAETALRKLFTDVDASEEELEKYYDMYMELDDEAIIPKEVRYQAGGGEDAAAQSS
FT                   TSKQIAKQKDKDVDAGTTGKFSVPRIKVLSDKMRFPKVGKRVVLNAEHLLAYKPEQIEL
FT                   YNTRSTQQQFETWYTAIKKEYDVDDEQMKIILDGLMVWCIENGTSPNLTGNWTMMDGDE
FT                   QVEYPLAPILDNAKPTFRQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLTELSLARY
FT                   AFDFYEVTSKTPKRAKEAHMQMKAAAVRGATNRLFGLDGNVNTIEEDTERHTAADVNKN
FT                   QHTLLGIKM"
FT   mat_peptide     <1..1339
FT                   /product="NIb"
FT   mat_peptide     1340..2110
FT                   /product="CP"
XX
SQ   Sequence 2113 BP; 716 A; 347 C; 498 G; 552 T; 0 other;
     tttcacaaaa tattctagtg tcatcgaaac tggttcagtc gacactgaca tgtttgaagc        60
     atcaatagtc gatgtggttg aaatactcaa gaaaggaggg atggatcagt gcaattacgt       120
     gacagataca atggagatta taaattccct gaatatgaaa gcagcagttg gagctttgta       180
     tggtgggaag aaaaaggatt attttgcgga atatgaggaa accgactatg ataggatatt       240
     ggaagcgagt tgtaagcgat tgtatttagg gaaaatgggc gtttggaatg ggtccttgaa       300
     ggctgaaata cgctctgttg agaaaatagc attaaataaa acccgatcat ttacagccgc       360
     tccaatcgag acgttgcttg gaggaaaggt gtgcgttgac gatttcaata acaaatttta       420
     cagctgcaac ttatcaatac cttcgactgt cggaataacc aaattttata gagggtggca       480
     caaaatgctg tcagctttgc ctgacaactg gatttattgt gatgctgatg gctctcgctt       540
     cgatagctct ctaacaccat atttactgaa cgctgtctta tcagttcgac ttgattttat       600
     ggaaccgtgg gatattggtg agaaaatgtt aagcaaccta tacaccgaaa tcatctatac       660
     agcaatcgca acaccagatg gttcagtcat aaagaaattt aaaggaaata acagtggtca       720
     gccatccacg gttgttgata acacaataat ggttatgctt agtgttcaat atgctttgag       780
     aaagtgcgga gttgagataa gcaagcaaaa cgagattatt aaatattttt gcaatggtga       840
     cgatttgttg atagcagtgc atccagatta tgaacacatg cttgatcatt ttaaacaata       900
     tttccacgaa cttggattgg attacgattt ctctagtaga cataaatcta aggaggatgt       960
     ttatttcatg tcacatagag gattacttag agacggcatt tatattccaa aactggataa      1020
     agagcgtatt gtgtcgatac ttgagtggga tcgtgcagat aagcctgaac atcggatgga      1080
     agccatatgc gcatccatga tcgaagcatg gggttactct gatcttgttc atgaaattag      1140
     aaaattttat cagtggctac tagaacaagc tccatataat gtaatagctc aaagcggaaa      1200
     ggcgccttat atagcggaaa cagcactaag aaagctattt actgacgttg acgctagtga      1260
     ggaggaattg gagaaatatt acgacatgta tatggagctt gacgatgaag cgataattcc      1320
     aaaagaagtt cgataccaag ctggtggtgg ggaggatgca gcagcgcaat caagcacatc      1380
     gaagcaaatt gcgaaacaaa aagataaaga tgttgatgct ggaacaactg gtaagttttc      1440
     agtgcccagg attaaagtat tatcagataa aatgcgattt ccgaaagttg gaaagagggt      1500
     tgtgttaaac gcggagcact tattggcata taaaccagaa caaatcgaat tatataacac      1560
     aaggtccacg caacaacagt tcgaaacttg gtatacggca attaagaagg agtatgacgt      1620
     ggatgatgaa caaatgaaaa tcatactaga tggtctaatg gtttggtgca tcgaaaatgg      1680
     gacttcaccg aatctaacag gaaattggac tatgatggat ggtgatgaac aagttgaata      1740
     cccattagca ccaatcttgg acaatgcaaa accgacattt aggcaaataa tggcgcattt      1800
     cagtgatgcg gctgaagcat acattgaata tagaaatgcc acggaaaaat acatgccccg      1860
     gtatggactt cagcgaaatc taacagaatt aagtttagca cgttacgcat tcgactttta      1920
     tgaggtgact tcaaaaactc ctaagcgagc taaggaagca cacatgcaaa tgaaggcggc      1980
     agcggttaga ggggcaacta atcgtttgtt tggcttggat ggtaatgtga acacaataga      2040
     agaggacacg gaaaggcaca cagcagcaga tgtaaacaag aaccagcaca cgttgcttgg      2100
     tattaaaatg tag                                                         2113
//