ID   JN117278; SV 1; linear; genomic RNA; STD; VRL; 1609 BP.
XX
AC   JN117278;
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DT   04-JUL-2011 (Rel. 109, Created)
DT   27-SEP-2011 (Rel. 110, Last updated, Version 2)
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DE   Pepper cryptic virus 2 isolate HW-01 segment RNA1, complete sequence.
XX
KW   .
XX
OS   Pepper cryptic virus 2
OC   Viruses; Riboviria; Partitiviridae; Deltapartitivirus.
XX
RN   [1]
RP   1-1609
RX   DOI; 10.1007/s11262-011-0634-4.
RX   PUBMED; 21695493.
RA   Sabanadzovic S., Valverde R.A.;
RT   "Properties and detection of two cryptoviruses from pepper (Capsicum
RT   annuum)";
RL   Virus Genes 43(2):307-312(2011).
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RN   [2]
RP   1-1609
RA   Sabanadzovic S., Valverde R.A.;
RT   ;
RL   Submitted (13-JUN-2011) to the INSDC.
RL   Biochemistry, Molecular Biology, Entomology and Plant Pathology,
RL   Mississippi State University, 100 Twelve Lane Stop 9775, Mississippi State,
RL   MS 39762, USA
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DR   MD5; a5e7665a7c0a9dfc466be88a547b48a3.
DR   EuropePMC; PMC5787326; 29373979.
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CC   GenBank Accession Numbers JN117278-JN117279 represent the complete
CC   genome of Pepper cryptic virus 2 isolate HW-01.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1609
FT                   /organism="Pepper cryptic virus 2"
FT                   /segment="RNA1"
FT                   /host="Capsicum annuum; Hungarian Wax"
FT                   /isolate="HW-01"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="06-Jun-2009"
FT                   /db_xref="taxon:1050903"
FT   CDS             95..1531
FT                   /codon_start=1
FT                   /product="putative RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:F8VBM9"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:F8VBM9"
FT                   /protein_id="AEJ07892.1"
FT                   /translation="MAIYRMLNGYVFTAFGNDLEKLDQRHIHHIRREEATTYRDEFALK
FT                   ELMDLSPILYEQFLEGWSRSYYEGSKHLQAIIQYGIPDPDPGLIDNDIYNKAGYVVLES
FT                   LGSLPRVRAFDVLTELDSVHYEQSSSAGYDYHGPKGPIQGENHIRAITRAKATLWSAIK
FT                   DEGEGIEHVIRSAVPDVGYTRTQLTDLYEKTKIRGVWGRAFHYILLEGTIANPLLDVFK
FT                   RGGTFYHIGENPQYSVPDILSQVSECCKYLVAIDWSNFDATVARFEINMAFDLIKTLIM
FT                   FPNIETELCFEICRQLFIHKKIAAPDGNIYWSRKGIPSGSYFTSIIGSIVNRLRVEYIF
FT                   RKAYDVGPKMCYTQGDDSLIGVDFRVDPDRLSEIAAPLNWKLNPAKTDVSLYPEHVTFL
FT                   GRTMYGGINQRDLKRCLRLLIFPEFPVPSGEISAYRAVSIAQDAGGTSEILNSIAKRLR
FT                   RQYGVAEEHAVPKHFKLYIP"
XX
SQ   Sequence 1609 BP; 548 A; 297 C; 345 G; 419 T; 0 other;
     agaattttcc aagccgttta cttggaccta gttatctagg taggaaaccg cttgggttaa        60
     attttaattt tatatttaat agataagagc caacatggca atttatcgca tgttgaatgg       120
     atatgttttc accgcatttg gtaatgatct tgagaaattg gatcaaagac atatacatca       180
     catcagacga gaagaagcga caacatatcg cgacgagttc gctctaaagg aactcatgga       240
     tttaagccct attttgtatg aacaattctt agaaggatgg tcacggagtt attacgaagg       300
     atcaaaacac ttacaagcaa ttatacaata tggcatccca gacccagatc caggcttaat       360
     agataatgat atctataaca aggcaggata tgtggtatta gaaagtttag gtagccttcc       420
     acgtgtgagg gcatttgacg tactcactga gttagactca gtacactatg agcaatcttc       480
     atccgctggc tatgactacc atggaccaaa aggacccata caaggcgaaa atcacataag       540
     ggcaattacc agagccaaag caacattgtg gtcagcaatt aaagatgaag gcgaaggaat       600
     agaacatgtc atcaggagcg cagttccaga tgtcggttac acccgcacac aattaacgga       660
     tctatacgag aagaccaaaa tcagaggagt ttggggtaga gcgtttcatt acatcctact       720
     tgaaggaaca atagctaatc cattgctaga tgttttcaag agaggcggaa cattttatca       780
     tatcggagag aatccacaat atagcgtacc agatatctta tcacaagtat cagaatgctg       840
     taaatatcta gtagcaattg actggagcaa tttcgatgct acagtagcta gatttgaaat       900
     caatatggca tttgatttaa taaagacgct aattatgttt ccaaacatcg agacggagtt       960
     atgtttcgag atatgcagac aactcttcat tcataagaag atagctgcac cggacggaaa      1020
     tatatactgg tcgcgcaaag gaatcccatc aggcagttac tttacatcca tcataggatc      1080
     tattgtaaac agattaagag tagagtatat ctttagaaag gcatacgatg tcggaccaaa      1140
     gatgtgttat acacagggag atgattcact aatcggagta gactttcgag tagacccaga      1200
     cagattaagt gagatagcag caccattgaa ttggaagctt aatcctgcta aaacagacgt      1260
     ttcgttgtac ccggagcatg tcactttctt aggaaggact atgtacggag gaataaatca      1320
     aagagatctt aaaagatgtc tgaggttatt aatattccct gaatttccgg ttccatcggg      1380
     agagatttca gcatacagag cagtatcaat cgcgcaagat gccggaggca caagtgagat      1440
     actgaacagt atagcaaaga gacttcgaag acagtatgga gtcgcagagg agcacgcagt      1500
     tccaaagcat ttcaaacttt acattccata aatgattgta atatcaacct attaacaatt      1560
     catatatgaa atgatgttga agtcggagtg gctgccaaca caccgctct                  1609
//