ID   JN117276; SV 1; linear; genomic RNA; STD; VRL; 1563 BP.
XX
AC   JN117276;
XX
DT   04-JUL-2011 (Rel. 109, Created)
DT   27-SEP-2011 (Rel. 110, Last updated, Version 2)
XX
DE   Pepper cryptic virus 1 isolate Jal-01 segment RNA1, complete sequence.
XX
KW   .
XX
OS   Pepper cryptic virus 1
OC   Viruses; Riboviria; Partitiviridae; Deltapartitivirus.
XX
RN   [1]
RP   1-1563
RX   DOI; 10.1007/s11262-011-0634-4.
RX   PUBMED; 21695493.
RA   Sabanadzovic S., Valverde R.A.;
RT   "Properties and detection of two cryptoviruses from pepper (Capsicum
RT   annuum)";
RL   Virus Genes 43(2):307-312(2011).
XX
RN   [2]
RP   1-1563
RA   Sabanadzovic S., Valverde R.A.;
RT   ;
RL   Submitted (13-JUN-2011) to the INSDC.
RL   Biochemistry, Molecular Biology, Entomology and Plant Pathology,
RL   Mississippi State University, 100 Twelve Lane Stop 9775, Mississippi State,
RL   MS 39762, USA
XX
DR   MD5; db21d1fbbc52b880eba73594122ae536.
XX
CC   GenBank Accession Numbers JN117276-JN117277 represent the complete
CC   genome of Pepper cryptic virus 1 isolate Jal-01.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1563
FT                   /organism="Pepper cryptic virus 1"
FT                   /segment="RNA1"
FT                   /host="Capsicum annuum; Jalapeno M"
FT                   /isolate="Jal-01"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="05-Jul-2009"
FT                   /db_xref="taxon:369643"
FT   CDS             93..1532
FT                   /codon_start=1
FT                   /product="putative RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:F8VBM7"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:F8VBM7"
FT                   /protein_id="AEJ07890.1"
FT                   /translation="MVRGTLVGYDYTQFQGDLVKSTHRHPHVVHREIATTYVDQYAYEH
FT                   IETFSSLYPELILKGWSRSYYLPEKHLAAVLNYSMPNVPASQLSQSLYRQAIESAKNGF
FT                   ISLPRVKAFDVLTEMDQVPFKSSSSAGYNYTGRKGLIGDENHSRAISIAKAVLWSAIKD
FT                   DGEGIEHVIRTSVPDVGYTRTQLTDLLEKTKVRQVWGRAFHYILLEGLVAYPFIQTVMS
FT                   HKTFIHAGQDPLISVPRLLSDVALNCKWIYSLDWSQFDATVSRFEIHAAFDIIKSYVDF
FT                   PNYETEQAFEITRQLFIHKKVAVPDGYIYESHKGIPSGSYYTSLVGSIINYLRINYLWR
FT                   LLTGHPPQQCHTLGDDSLVGDNSYVNPQAIEEAANKLGWHFNPDKTQYSTVPEEITFLG
FT                   RTYVGGLNKRDLTKCIRLLVYPEYPVESGRISAYRAKSIAQDAGGLSEVLNRIADKLRR
FT                   IYGTASEEEVPIYFKRYVFGV"
XX
SQ   Sequence 1563 BP; 492 A; 329 C; 310 G; 432 T; 0 other;
     agaatttccc ccttgttcca aggcacctct cacgctccgg tgccataaac aagagattga        60
     aattaatcaa tttatatact tacctcgtta cgatggtaag aggcacactt gttggttatg       120
     actataccca atttcagggt gatttagtta aatcaactca ccgacaccct catgttgttc       180
     accgcgaaat cgcaacaaca tatgtcgatc agtatgctta tgagcatatt gaaacattca       240
     gtagtttata tcctgaactt atccttaaag gatggtctag gagttactat ctgcccgaga       300
     agcatctcgc tgcagtgtta aactacagta tgccaaatgt tcctgcatct cagctcagtc       360
     agtcattata cagacaagcg attgaatcag ctaagaatgg atttattagc cttccccgag       420
     tgaaggcttt cgatgtactt accgaaatgg accaagtacc ttttaagtcg tcttcatcgg       480
     cgggttataa ttacacaggc aggaaaggcc ttattggtga tgaaaatcac tcaagggcaa       540
     tttcgatagc taaagctgta ttatggtcag ccatcaaaga tgatggagaa ggcattgaac       600
     atgtcattcg gacttcagta ccagacgttg gctacactcg aactcagtta acggacttgc       660
     tagaaaagac gaaagtcaga caagtttggg gcagagcatt ccactatatc ctacttgaag       720
     gattggttgc atacccgttt atacaaacag tcatgtcaca taaaacgttt attcacgcag       780
     gacaagaccc gttaattagt gttcctagat tattatcaga cgttgcattg aattgcaaat       840
     ggatttactc acttgattgg agtcaattcg acgctacagt tagtcgattc gaaatccacg       900
     ccgcttttga cataattaag tcttacgtag actttccaaa ttatgaaaca gagcaggctt       960
     tcgagatcac tcgacaacta ttcatacata agaaagttgc agtacctgac ggttacatct      1020
     acgaatcaca caaaggaatt ccatctggaa gttactacac ttcacttgtt ggatcgatta      1080
     tcaattattt gagaatcaac tacctctgga gactcctcac cggacaccca ccacaacagt      1140
     gtcacacttt aggagatgac tcattggttg gagataactc atatgttaat ccacaagcga      1200
     ttgaagaagc agcaaacaag ctaggctggc acttcaaccc agataagact caatactcta      1260
     cagtacctga agagatcaca tttctcggac gaacttacgt aggcggatta aataagagag      1320
     atctaacgaa atgtattaga ttactcgtat atcccgaata cccagtagag tcaggtcgaa      1380
     tttcagctta tagagctaag tctatcgcac aagatgctgg cggtctcagc gaagtgctaa      1440
     ataggatagc agataagctt agacgtattt acggtacggc ttcagaagaa gaggtaccaa      1500
     tttattttaa acgctatgta tttggagttt aaataaatac gtggaaggta tttaaacctt      1560
     acc                                                                    1563
//