ID   JN083843; SV 1; linear; genomic RNA; STD; VRL; 2135 BP.
XX
AC   JN083843;
XX
DT   04-JUN-2013 (Rel. 117, Created)
DT   04-JUN-2013 (Rel. 117, Last updated, Version 1)
XX
DE   Pennisetum mosaic virus isolate CD2 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Pennisetum mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-2135
RA   Cui X.W., Gao B., Li X.D.;
RT   "Sequencing and analysis of the 3'-terminal genome of Pennisetum mosaic
RT   virus isolates from maize plants in Chengde";
RL   Unpublished.
XX
RN   [2]
RP   1-2135
RA   Cui X.W., Gao B., Li X.D.;
RT   ;
RL   Submitted (06-JUN-2011) to the INSDC.
RL   Plant Pathology, College of Plant Protection, Shandong Agricultural
RL   University, Tai'an, Shandong 271018, China
XX
DR   MD5; d412b93d2b3052ca1c78ee679e047439.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2135
FT                   /organism="Pennisetum mosaic virus"
FT                   /host="maize"
FT                   /isolate="CD2"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Hebei"
FT                   /collection_date="Aug-2010"
FT                   /db_xref="taxon:221262"
FT   CDS             <1..1894
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:R9Q9N1"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:R9Q9N1"
FT                   /protein_id="AEK64752.1"
FT                   /translation="PLETLLGGKVCVDDFNNQFYAHHLIGPWTVGITKFYGGWNQLLEK
FT                   LPNGWVYCDADGSQFDSSLTPYLINAVLDIRLSFMEEWDIGERMLMNLYTEIVFTPIAT
FT                   PDGSVIKKFKGNNSGQPSTVVDNTLMVILAFNYTMLSCGIDSDMIDNVCKMFANGDDLL
FT                   LAVNPDYEYILDSFSNHFSDLGLNFDFSSRTKDKSELWFMSTRGIKYNEMYIPKLEKER
FT                   IVAILEWDRSKQPQHRLEAICASMIEAWGYPDLLHEIRKFYAWLLEMQPFADLAKEGLA
FT                   PYIAESALQNLYTGNGVNENEIEKYFQQFKTDLQGYVEDYNEDVYHQSGRVDAGTPPQT
FT                   EEQKKAAEEQRQKAAADAEAKRKAAADEEARKAREAEAERKRQADAAAKGKQDKDVNVG
FT                   TTGTVAVPKLKAMSSKMRLPMAKGKNILHVEFLLGYRPAQQDISNTRATRAEFDRWYDA
FT                   VKNEYEVDDTQMTVIMSGLMVWCIENGCSPNINGVWTMMDGEEQRTFPLKPVIENASLT
FT                   FRQIMHHFSDAAEAYIEFRNATERYMPRYGLQRNLTDYSLARYAFDFYEITSRTTARAK
FT                   EAHMQMKAAAVRGSNTRMFGLDGNVGESQENTERHTAGDVSRNMHSLLGVQQHN"
FT   mat_peptide     <1..985
FT                   /product="NIb"
FT   mat_peptide     986..1891
FT                   /product="CP"
FT   3'UTR           1895..2135
XX
SQ   Sequence 2135 BP; 694 A; 382 C; 494 G; 565 T; 0 other;
     tccactcgaa acattactag gaggaaaagt gtgcgtcgac gattttaaca accaatttta        60
     cgcacaccat ttgatcggtc catggacagt tgggataaca aaattttacg gaggctggaa       120
     ccaattactc gagaaattgc cgaatggatg ggtgtactgc gatgcggatg gatcacaatt       180
     tgacagttca ttaacaccat atctgataaa tgcagtgttg gacattagac taagtttcat       240
     ggaagagtgg gacattggtg agagaatgct catgaattta tacactgaga ttgtcttcac       300
     accaatagca acaccagatg gctcagttat taagaagttt aaaggaaaca acagtggaca       360
     gccatcaaca gttgtagata atacattaat ggttatatta gcttttaatt atactatgtt       420
     atcttgtggt attgatagtg atatgattga taatgtttgt aaaatgtttg ctaatggtga       480
     tgatttgtta ctagctgtga atcctgatta tgaatatata ttagattcgt ttagtaatca       540
     tttttccgat ctaggtttga attttgattt tagttcacgc acaaaagaca aatcagaact       600
     ttggttcatg tccactcgag ggattaaata taatgaaatg tacattccaa aactcgagaa       660
     agaaagaata gttgcaattc ttgagtggga tcgctcaaag cagccacagc atagacttga       720
     agccatttgt gcatcaatga ttgaggcatg gggataccca gatttgttac atgaaattcg       780
     gaagttctat gcttggttac tagagatgca accttttgct gatttggcga aagagggatt       840
     ggcaccatac attgcagaat cggcattaca aaatttgtac acaggcaatg gtgtcaatga       900
     aaacgaaata gaaaaatatt ttcaacaatt caaaacagat ttacaaggtt atgttgaaga       960
     ttacaatgaa gatgtgtatc atcaaagtgg tagagttgat gccggaactc caccacaaac      1020
     agaagaacag aagaaagctg ctgaggaaca aagacagaaa gcagcagctg atgcagaagc      1080
     taagcgtaaa gcagcagctg atgaggaggc aagaaaagcg cgagaagccg aagctgaaag      1140
     gaaacgacaa gcagatgctg ccgcaaaagg aaaacaggac aaagatgtaa acgtaggtac      1200
     tactggaaca gtagcagtgc caaaattaaa agctatgtcc tcaaaaatgc gcttaccaat      1260
     ggctaaggga aagaatattt tacacgtaga attcctcctt ggttacagac cagctcaaca      1320
     agatatatct aacacacgag caacacgagc tgagtttgat aggtggtatg atgctgtcaa      1380
     gaatgaatat gaagtggatg acactcaaat gacagtgatc atgagtggcc taatggtatg      1440
     gtgtatagag aatggttgct cacctaacat aaacggagtg tggacaatga tggatggaga      1500
     agaacaaaga actttcccac ttaaacccgt cattgaaaat gcatcactca catttcgaca      1560
     aattatgcac cattttagtg atgcagctga agcctacata gaattccgta atgcaacgga      1620
     gcgatatatg ccacgatatg gtcttcagcg aaacttgacc gactatagct tggctcgtta      1680
     tgcgtttgat ttctacgaga tcacatctcg aacaacagca cgagctaagg aagcccacat      1740
     gcagatgaaa gcagcagcag tgcgtggttc aaacacgcgc atgttcggct tggatgggaa      1800
     tgtcggtgag tcccaggaga atacagaacg tcacactgct ggcgacgtta gtcgcaacat      1860
     gcactccctt cttggggtgc agcagcacaa ctgattcctg gaaaccctgt ttgcagtacc      1920
     ttagtatttt tataattcta taaggataat gaggctctgc ctccacttta tatgctttta      1980
     ttaagagtac tataagtccc ttgctattct gcaagacgtg tgaggctttg cctcttgtct      2040
     tataggtttg agggatgtac tagcttcgaa ccactagacg gacacctgtt gagtggctat      2100
     gctacgttgc agggttgcga gtttagtggc gagag                                 2135
//