ID JN082237; SV 1; circular; genomic DNA; STD; VRL; 2742 BP. XX AC JN082237; XX DT 17-AUG-2011 (Rel. 109, Created) DT 17-AUG-2011 (Rel. 109, Last updated, Version 1) XX DE Tomato yellow leaf curl China virus isolate SC101 clone 10, complete DE genome. XX KW . XX OS Tomato yellow leaf curl China virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2742 RA Tao R., Qi Y., Yun B.L., Ling Q.; RT ; RL Submitted (03-JUN-2011) to the INSDC. RL Plant Pathology, College of Plant Protection, 86-023-68250517, Tiansheng RL Road 2, Chongqing, China, Chongqing, Chongqing 400716, China XX DR MD5; 714b55a82c73fed13f282c28d9aeee59. XX FH Key Location/Qualifiers FH FT source 1..2742 FT /organism="Tomato yellow leaf curl China virus" FT /host="Malvastrum coromandelianum" FT /isolate="SC101" FT /mol_type="genomic DNA" FT /country="China:Sichuan" FT /collection_date="08-Nov-2010" FT /identified_by="Qing Ling" FT /clone="10" FT /db_xref="taxon:185793" FT gene 130..477 FT /gene="AV2" FT CDS 130..477 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:G1ED45" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:G1ED45" FT /protein_id="AEM36729.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ILVIRARDYVEASRRYSHFHSRLQGASPSELRQPLHTSCCCPHCPRHQKTNMEQQAHVS FT KAHEVPDVQKP" FT gene 290..1060 FT /gene="AV1" FT CDS 290..1060 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:G1ED46" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:G1ED46" FT /protein_id="AEM36728.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYTRRAAVPTVRVTRRQIWN FT NRPMYRKPMRCRMYRSPDVPKGCEGPCKMQSYEARHDVSHTGKVICVTDVTRGNGITHR FT VGKRFCVKSIYVIGKIWMDENIKLKNHTNTVMFFLVRDRRPSGTPMDFQQVFNCFDNEP FT STGTVKNDLRDRFQVIRKFNYMVTGGQYASKEQAVVKKFMRVNTHVVYNHQEQAKYENH FT TENALLLYMVCTHASNPVYATLKVRIYFYDSQMN" FT gene complement(1057..1461) FT /gene="AC3" FT CDS complement(1057..1461) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:G1ED47" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:G1ED47" FT /protein_id="AEM36733.1" FT /translation="MDSRTGELLTAAQAENGVYIWTVKNPLYFKITKHLERPFLRNHDI FT ITLQVQFNYNLRKALGIHKCFLTCKIWTRLHPQTLRFLRVFKYQCIKYLDRLGVISINN FT VIRAISHVLYNVLEGTIDVIEDHDIKLNIY" FT gene complement(1202..1606) FT /gene="AC2" FT CDS complement(1202..1606) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:G1ED48" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:G1ED48" FT /protein_id="AEM36732.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRIAKKTTRRRRIDLPCGCSYFLAIG FT CHDNGFTHRGTTHCSSSREWRLYLDGQKSPLFQDNQTPRATISEEPRHNHITGPIQLQP FT EESVGDTQMFSNLQNLDSFTSSDIAFLKSI" FT gene complement(1509..2594) FT /gene="AC1" FT CDS complement(1509..2594) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:G1ED25" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:G1ED25" FT /protein_id="AEM36730.1" FT /translation="MPRLNSFQVKAKNIFLTYPKCPIPKEQALEIIQQIPCPSDKLFIR FT VAQEKHRNGSLHLHVLIQFKGKAQFRNPRHFDITHPNTSTQYHPNFQGAKSSSDVKSYI FT KKDGDYIDWGSFQIDGRSARGGQQTANDAAAEALNTGSAEAAMAVIREKLPKDYIFQYH FT NLKSNLDRIFAPPLEVYISPFASSSFDQVPEELEDWAVDNVVSAAARPLRPISIVIEGD FT SRTGKTMWARSLGQHNYLCGHLDLSPKVYNNDAWFNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNTALRNWALKNAIFVTLQGPL FT YSGSYQGATPNRQEDNQTTEN" FT gene complement(2180..2437) FT /gene="AC4" FT CDS complement(2180..2437) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:G1ED50" FT /protein_id="AEM36731.1" FT /translation="MGHCISMCSSNSKVKPSSVIPDISTSHTLIPPPNTTQTSRELSPA FT RTSSPTSRRTVITSTGVVFRSMEDLHEEVNRQLMMLLQRP" XX SQ Sequence 2742 BP; 725 A; 548 C; 623 G; 846 T; 0 other; accggatggc cgcgcgattt tttttaaagt ggtccccgca ttcgcgtatg tccaatcatg 60 gccgctcctc aaagcttaat tattaaatgg tcccctatat aacttaggcc ccaagtattt 120 acgttaaaca tgtgggatcc tttactcaac gagttcccgg atactgtaca cgggttcagg 180 tgtatgcttg caataaaata cctgcagctt gtagaaaata cgtattctcc cgatacgttg 240 ggatacgatc taatacgcga tctcatactt gttatacgtg cgagggatta tgtcgaagcg 300 tcccgccgat atagtcattt ccactcccgc ctccaaggtg cgtcgccgtc tgaacttcga 360 cagcccttac acacgtcgtg ctgctgtccc cactgtccgc gtcaccagaa gacaaatatg 420 gaacaacagg cccatgtatc gaaagcccat gaggtgccgg atgtacagaa gccctgatgt 480 tccgaagggt tgtgaaggcc catgtaagat gcagtcatat gaggcccgtc atgatgtatc 540 tcatactggt aaggtgatat gtgtcacgga tgttacacgt ggtaatggta ttacgcatcg 600 agttggtaag aggttttgtg tgaaatctat ttacgtcatt gggaagatat ggatggatga 660 aaatattaaa ttgaagaatc acaccaatac agttatgttt ttccttgtta gagatcggcg 720 tccgagtggt actccgatgg attttcaaca ggtgtttaat tgttttgaca atgagccaag 780 caccggtact gtgaagaatg atcttagaga taggtttcaa gtgattcgca agttcaatta 840 tatggttact ggtgggcaat atgcgtccaa agaacaagca gtggtgaaga agttcatgcg 900 ggttaatacc catgttgtgt ataatcatca agaacaggcg aagtatgaaa atcatactga 960 gaatgcgttg ttgttgtata tggtgtgtac tcatgctagt aatcctgtat atgcgacttt 1020 gaaagtccgt atctattttt atgattctca aatgaattaa taaatattta gttttatatc 1080 atgatcttca attacatcaa ttgtgccttc taggacattg tataatacat gagatattgc 1140 tctaattaca ttgttgatgc taatcactcc caatctatct aaatatttaa tacattgata 1200 cttaaatact cttaagaaac gcaatgtctg aggatgtaaa cgagtccaga ttttgcaggt 1260 tagaaaacat ttgtgtatcc ccaacgcttt cctcaggttg tagttgaatt ggacctgtaa 1320 tgtgattatg tcgtggttcc tcagaaatgg tcgctctagg tgtttggtta tcttgaaata 1380 aaggggattt ttgaccgtcc aaatataaac gccattctct gcttgagctg cagtgagtag 1440 ttcccctgtg cgtgaatcca ttatcgtgac agccaatggc gagaaagtat gaacagccac 1500 agggtagatc aattctccgt cgtctggttg tcttcttggc gattcggtgt tgcaccttga 1560 taggaacctg agtagagtgg gccttggagg gtgacgaaga tcgcattttt tagcgcccaa 1620 tttcgaagtg cggtgttctt ttcctcttcc agatactctt tatagctgga attgggtcct 1680 ggattgcaga ggaagatagt gggtattccg cctttaattt gaactggttt cccgtatttg 1740 gtgttgcttt gccagtccct ttgggctccc atgaattcct taaagtgctt taggtagtgc 1800 ggatctacgt catcaatgac gttgaaccaa gcatcattat tgtacacctt tggactcaga 1860 tccaaatgac cacacaaata attatgttgt cctaatgacc tggcccacat cgtcttcccc 1920 gttctactat caccctctat gactatactt atcggtctta aaggccgcgc agccgcactg 1980 acaacattat ccaccgccca atcttcaagt tcttctggaa cttgatcaaa agaagaagaa 2040 gcaaatggag aaatatatac ctccaacgga ggtgcaaaaa tcctatctaa attagatttt 2100 aaattatgat attgaaaaat ataatctttc gggagtttct cccgaataac agccatagcg 2160 gcttcagcgg aacctgtgtt tagggcctct gcagcagcat cattagctgt ctgttgacct 2220 cctcgtgcag atcttccatc gatctgaaaa ctaccccagt cgatgtaatc accgtccttc 2280 ttgatgtagg acttgacgtc cgagctggac ttagctccct ggaagtttgg gtggtattgg 2340 gtggaggtat tagggtgtgt gatgtcgaaa tgtctgggat tacggaactg ggctttacct 2400 ttgaattgga tgagcacatg gagatgcagt gacccatttc gatgtttttc ttgtgctact 2460 cgtatgaata atttatcgga tgggcatggt atttgttgaa tgatttctag ggcttgttct 2520 tttggaatgg ggcatttggg ataagtgaga aatatgtttt tggctttcac ttggaatgaa 2580 ttaagacgag gcattttgac ttagtcaatt gggtgctctc taaagtccta tggaatgggg 2640 ggctttgggt gcccatttat accgagcacc caaatggcaa tatcgtaatt ccccaaataa 2700 attcaaaatt cgaaatccaa aagcggccat ccgtataata tt 2742 //