Dbfetch
ID JN082234; SV 1; circular; genomic DNA; STD; VRL; 2747 BP. XX AC JN082234; XX DT 17-AUG-2011 (Rel. 109, Created) DT 17-AUG-2011 (Rel. 109, Last updated, Version 1) XX DE Malvastrum yellow vein Yunnan virus isolate SC101 clone SC101-43, complete DE genome. XX KW . XX OS Malvastrum yellow vein Yunnan virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2747 RA Tao R., Yun B.L., Ling Q.; RT ; RL Submitted (03-JUN-2011) to the INSDC. RL Plant Pathology, College of Plant Protection, 86-023-68250517, Tiansheng RL Road 2, Chongqing, China, Chongqing, Chongqing 400716, China XX DR MD5; 3c621fc664f5ca54fa7c2e68700ab662. XX FH Key Location/Qualifiers FH FT source 1..2747 FT /organism="Malvastrum yellow vein Yunnan virus" FT /host="Malvastrum coromandelianum" FT /isolate="SC101" FT /mol_type="genomic DNA" FT /country="China:Sichuan" FT /collected_by="Qing Ling" FT /collection_date="05-Feb-2010" FT /identified_by="Ruan Tao" FT /clone="SC101-43" FT /db_xref="taxon:290030" FT gene 131..469 FT /gene="AV2" FT CDS 131..469 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q5K2L6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q5K2L6" FT /protein_id="AEM36735.1" FT /translation="MWDPLLNEFPETVHGFRCMLSIKYLQLLSEGYSPDTVGFDLIREL FT ISILRSRNYVEASCRYRHFYSRVEGASSSELRQPLLNPCSCPHCPRHKISKLGEQAHES FT QAQNVQDV" FT gene 291..1061 FT /gene="AV1" FT CDS 291..1061 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q5K2L5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q5K2L5" FT /protein_id="AEM36734.1" FT /translation="MSKRPADIVISTPGSKVRRRLNFDSPYSTRAAVPTVRVTKSRSWA FT NRPMNRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPYDFQQVFNVYDNEP FT STATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT gene complement(1058..1462) FT /gene="AC3" FT CDS complement(1058..1462) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:G1ED53" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:G1ED53" FT /protein_id="AEM36738.1" FT /translation="MDLRTGEPITAAQAWSGAYIWEVPNPLYFKILNHVNRPFTMNMDI FT ITIGIQFNYNLRRALGVHKCFLTYRIWTTLHPQIGLFLRVFKTQVLKYLNNLGVISINS FT IIRAVNHVLWKKIEQTMYVDMDSEIKFNIY" FT gene complement(1155..1607) FT /gene="AC2" FT CDS complement(1155..1607) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:G1ED54" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:G1ED54" FT /protein_id="AEM36739.1" FT /translation="MRSSSPSKDHCTQVPIKLQHRDAKRRNRRKRVDLECGCSYYLSIN FT CFNHGFTHRGTHHCSSSMEWRLYLGSSKSPLFQDPQPRQPSIHDEHGHHNNRDPIQLQP FT SESSGSAQVFSDIPNLDDLTPSDWSFLKGIQNPSPQVSKQSRCNFN" FT gene complement(1504..2595) FT /gene="AC1" FT CDS complement(1504..2595) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:G1ED55" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:G1ED55" FT /protein_id="AEM36736.1" FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSQLLNLQTPTSIKFIR FT ICRELHKNGNPHLHVLIQFEGKFQCRNNRFFDLTSPSRSAHFHPNIQGAKSSSDVKTYV FT EKDGDILDHGIFQVDGRSARGGCQTANDAYTEAINAGSKAQALNILKEKAPRDFLLQFH FT NLNSNLDRYFQEPPAPYVSPFSSSSFDQVPEELEEWACENVVDAAARPLRPQSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNIIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNTALKNWAIKNAIFVTLEGPL FT YSGSNQTTAQGREETQQEEESRS" FT gene complement(2145..2438) FT /gene="AC4" FT CDS complement(2145..2438) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:G1ED32" FT /protein_id="AEM36737.1" FT /translation="MGILTCMFSSSSKGSSSVETIDSSTSHPQAGQHISIQTFRELKAQ FT AMSKPTWRKTETSLIMEFSKSMEDQLEEVARLPTTHIPRQSTQGPKLRPSIY" XX SQ Sequence 2747 BP; 706 A; 557 C; 639 G; 845 T; 0 other; accggatggc cgcgcaattt tttatgggcc cccccactaa ctactgtctg ccaatcacat 60 gacgcgctca aagcttaaat aattctcccg cctattataa gtacttcgtg cctaagtttc 120 gctttgaaaa atgtgggatc cattattaaa cgagttcccc gagacggttc acgggtttcg 180 gtgcatgctt tcaatcaaat atcttcagtt actctctgaa ggatactctc cagatacggt 240 tggtttcgat ctaatacgtg agttaatttc tattttgcgt tccaggaatt atgtcgaagc 300 gtcctgcaga tatcgtcatt tctactcccg ggtcgaaggt gcgtcgtcgt ctgaacttcg 360 acagccctta ctcaacccgt gcagctgtcc ccactgtccg cgtcacaaaa tctcgaagtt 420 gggcgaacag gcccatgaat cgcaagccca gaatgtacag gatgtataga agccctgatg 480 tccctaaggg atgtgaaggc ccatgtaagg tccaatcttt cgatgcgaag aacgatattg 540 ggcatatggg taaggtgatc tgtttgtctg acgttacccg tggtattgga cttacccatc 600 gagttggcaa acgtttctgt gtcaagtcac tttatttcgt tggcaagata tggatggatg 660 aaaatattaa ggttaagaat cacacgaaca ccgttttgtt ctggatagtt agggatcgac 720 gtcctactgg aacgccttat gattttcagc aggtttttaa tgtttatgat aatgagcctt 780 ccacggcaac tgtgaaaaac gaccagcgtg atcgtttcca ggttatcagg aggttccagg 840 caacggtgac cggtggacaa tatgcagcga aggagcaggc gattattaga aagttttatc 900 gtgttaataa ttatgtagtg tataatcacc aggaagctgg gaagtatgag aaccatactg 960 aaaatgcttt gttattgtat atggcatgta cccatgcctc taatcccgtg tatgctactt 1020 tgaaagtcag gagttatttc tatgactcag tgacgaatta ataaatatta aattttattt 1080 ctgaatccat gtctacatac atagtttgtt ctattttttt ccataataca tgattcacag 1140 ctctaataat tgagttaatt gaaattacac ctagattgtt tagatacttg aggacttggg 1200 ttttgaatac ccttaagaaa agaccaatct gagggtgtaa ggtcgtccag attcggtatg 1260 tcagaaaaca cttgtgcact cccagagctc tccgaaggtt gtagttgaat tggatcccta 1320 ttgttatgat gtccatgttc atcgtgaatg gacggttgac gtggttgagg atcttgaaat 1380 aaaggggatt tggaacttcc cagatatagg cgccactcca tgcttgagct gcagtgatgg 1440 gttcccctgt gcgtaaatcc atggttaaag cagttgattg acaaataata agaacacccg 1500 cattcaagat cgactctctt cctcctgttg cgtctcttcg cgtccctgtg ctgtagtttg 1560 attggaacct gagtacagtg gtccttcgag ggtgacgaag atcgcattct tgatagccca 1620 gtttttgagt gcggtgttct tgtcctcgtc gaggaattct ttataactgc tgttgggacc 1680 aggattgcat aggaagattg tcggtattcc gcctttaatt tgaactggct tcccgtactt 1740 tgtgttggat tgccagtccc tttgggcccc catgaactct ttaaagtgct tgaggaagtg 1800 cgggtcgacg tcatcaatga tgttatacca agcatcattg ctgtacactt tgggacttaa 1860 gtctagatgg ccacacaaat agttgtgtgg gcctagcgac ctagcccaca tcgtcttccc 1920 ggtccgacta tctccctcga tgactatact ttgaggtcta aggggccgcg cagcggcatc 1980 gacaacattc tcgcacgccc actcttcaag ttcttctgga acttgatcaa atgaagaaga 2040 agaaaaagga gaaacataag gagctggtgg ctcttgaaaa tacctatcta aatttgaatt 2100 taaattatga aattgaagta gaaagtctct tggggctttc tccttcaata tattgagggc 2160 ctgagctttg gaccctgcgt tgattgcctc ggtatatgcg tcgttggcag tctggcaacc 2220 tcctctagct gatcttccat cgacttggaa aattccatga tcaaggatgt ctccgtcttt 2280 ctccacgtag gttttgacat cgcttgagct tttagctccc tgaatgtttg gatggaaatg 2340 tgctgacctg cttggggatg tgaggtcgaa gaatctattg tttctacact ggaacttccc 2400 ttcgaactgg atgagaacat gcaggtgagg attcccattt ttatgaagct ctctgcagat 2460 tctaatgaat tttatggaag ttggggtttg gagatttaat aattgggaaa gtgcctcttc 2520 ttttgtgagg gagcacttgg gataagtgag gaaataattt ttggcattta ttttaaaccg 2580 attgggggct gccatgttga ctaagtcaat cggtgtctct caatttgctc tatgtatcgg 2640 tgtattggag tcctatatat atggagaccc taatggcata attgtaataa aagaaaaata 2700 atttgatatt aaaacgaaaa ggctaaagcg gccatccgtc taatatt 2747 //