ID   JN008885; SV 1; linear; genomic RNA; STD; VRL; 1677 BP.
XX
AC   JN008885;
XX
DT   24-OCT-2011 (Rel. 110, Created)
DT   24-OCT-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Rice black streaked dwarf virus isolate SDxingtai4 major capsid protein
DE   gene, complete cds.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1677
RA   Gao R., Cheng Z., Ji Y., Zhou Y.;
RT   ;
RL   Submitted (23-MAY-2011) to the INSDC.
RL   Institute of Plant Protection, Jiangsu Academic of Agricultural Sciences,
RL   No. 50.Zhongling Road, Nanjing, Jiangsu 210014, China
XX
DR   MD5; c4103c0761839820e5a89561149163e3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1677
FT                   /organism="Rice black streaked dwarf virus"
FT                   /segment="10"
FT                   /host="maize"
FT                   /isolate="SDxingtai4"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Jul-2010"
FT                   /db_xref="taxon:10990"
FT   CDS             1..1677
FT                   /codon_start=1
FT                   /product="major capsid protein"
FT                   /db_xref="InterPro:IPR008618"
FT                   /db_xref="UniProtKB/TrEMBL:G8FMI6"
FT                   /protein_id="AEQ75487.1"
FT                   /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNNLFHE
FT                   LNIVKSPHVASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKDHIRSFFQNEHQ
FT                   PIFQTLTNNDLSEEFVGVTTFGLSLFATSKLDAEQIERVQIETLTEGNITLKPFPADGL
FT                   EVILDDSYIGIVGKIPGLEVHKLLDKCCREVPAQMGILTDEVKLLMRTGKLRIDGGYDF
FT                   NCPASTTDVTHYGGYDQFSRQMFERLNLFYNISLSIIPVSALKTVHLFEKELSVLDADK
FT                   SLLEQTWSAVASFVETWQVKSKVKADDPDEYELTSLSTLRTNYDGTSASSPFTDKKFID
FT                   WYIKTFSKTEKGSSLRRNELEEKSATSTSTTVKKVKIHFSVQYFDEFKVNGHEKSVVVQ
FT                   THKGEMTLDYYRKIGEVLSAIWKRGKSLAVPCFDYIKLGVEKAFHLAPVILKKYNLTID
FT                   DIINFIEKGPSYLAKLDKIDDWSLISKLIITSALPNIIQAVYKTDPSNNVMNSVIISRA
FT                   NNLLKSDRDRLLKKALSANVSSSNTSSHEHVQKIVLNKVTR"
XX
SQ   Sequence 1677 BP; 546 A; 302 C; 299 G; 530 T; 0 other;
     atggctgaca taagactcga catagcgccc gatcttatcc ataatggtgt accccagaga        60
     ctttccgata caataatttt gaacaaccga ccaacaatca ctctgctatc tcatttcaac       120
     aatctatttc atgaattaaa cattgtcaaa tcgccccacg ttgcatcttc ccaaactacc       180
     gttaatttgt acattcgtaa gcatttgctg acccgacttc atgatagact gcaaaccgta       240
     gaaactagca ctttacccaa catcacgcaa cttaaagacc atattcgtag cttctttcaa       300
     aatgaacacc aacctatttt ccagacctta acgaacaacg acctaagtga agaatttgta       360
     ggtgtgacta cttttggact aagcttattt gctacctcca aacttgatgc tgaacaaata       420
     gaacgtgtac aaattgagac cttaactgaa ggaaacatta ctttgaagcc ttttcccgct       480
     gatggtttag aagtcattct cgatgatagt tatattggta tagttggtaa aattccaggt       540
     ttagaagttc ataaattgct agataaatgt tgtcgtgaag ttcctgctca aatgggaata       600
     cttactgatg aagttaaact tttgatgcgt actggtaaat taagaattga tggtggttac       660
     gattttaatt gtcctgcaag cactacggat gttacacatt acggtggtta tgaccaattt       720
     tcacgtcaaa tgttcgaacg tttgaattta ttttataata ttagccttag cataatcccc       780
     gtttcagctt tgaaaacagt tcatttattt gaaaaagaac taagtgtttt ggatgcagat       840
     aaatctttac tcgaacaaac ttggagcgca gtagcgtcat ttgttgaaac ttggcaggtt       900
     aaatctaaag ttaaagccga tgatccagat gaatatgaat tgaccagttt gtccacgttg       960
     cgcactaatt acgatggcac ttctgcttct agtcctttca cagataagaa attcattgat      1020
     tggtacatta agactttttc taaaactgag aaaggatcgt cgttgcgtcg aaacgaatta      1080
     gaagagaaaa gtgccactag tacttcaact acagtaaaga aggttaaaat tcatttctcc      1140
     gttcaatatt ttgatgaatt taaagttaac ggacatgaaa aaagcgttgt agttcaaact      1200
     cataaaggcg aaatgacgtt agattattat cgtaaaattg gcgaagtgtt aagtgctatt      1260
     tggaaacgtg gtaaatcttt ggctgtacct tgttttgatt atattaagct tggcgttgag      1320
     aaagcatttc atttagcacc cgtaattctg aagaagtata acttgactat tgatgatatt      1380
     atcaacttca ttgagaaagg accttcttat ttagctaaat tagacaagat tgatgattgg      1440
     tctttaattt cgaagcttat cattactagc gctttaccta atatcattca agctgtttac      1500
     aaaaccgatc caagtaataa tgttatgaac tcagtaatta tcagtagagc gaacaatttg      1560
     ttgaaatctg atagggatag gctattaaag aaggcacttt ccgccaacgt ttcttcttct      1620
     aacacatcta gtcatgaaca tgtacagaag atagtactaa acaaagtgac aagatga         1677
//