ID   JN008882; SV 1; linear; genomic RNA; STD; VRL; 1677 BP.
XX
AC   JN008882;
XX
DT   24-OCT-2011 (Rel. 110, Created)
DT   24-OCT-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Rice black streaked dwarf virus isolate SDtaian13 major capsid protein
DE   gene, complete cds.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1677
RA   Gao R., Cheng Z., Ji Y., Zhou Y.;
RT   ;
RL   Submitted (23-MAY-2011) to the INSDC.
RL   Institute of Plant Protection, Jiangsu Academic of Agricultural Sciences,
RL   No. 50.Zhongling Road, Nanjing, Jiangsu 210014, China
XX
DR   MD5; c5184a333b4c1ecc1514051b79444efd.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1677
FT                   /organism="Rice black streaked dwarf virus"
FT                   /segment="10"
FT                   /host="maize"
FT                   /isolate="SDtaian13"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Jul-2010"
FT                   /db_xref="taxon:10990"
FT   CDS             1..1677
FT                   /codon_start=1
FT                   /product="major capsid protein"
FT                   /db_xref="InterPro:IPR008618"
FT                   /db_xref="UniProtKB/TrEMBL:G8FMI3"
FT                   /protein_id="AEQ75484.1"
FT                   /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNNLFHE
FT                   LNIVKSPHVASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKDHIRSFFQNEHQ
FT                   PIFQTLTNNDLSEEFVGVTTFGLSLFATSKLDAEQIERVQIETLTEGNITLKPFSADGL
FT                   EVILDDSYIGIVGKIPGLEVHKLLDKCCREVPAQMGILTDEVKLLMRTGKLRIDGGYDF
FT                   NCPASTTDVTHYGGYDQFSRQMFERLNLFYNISLSIIPVSALKTVHLFEKELSVLDADK
FT                   SLLEQTWSAVASFVETWQVKSKVKADDPDEYELTSLSTLRTNYDGTSASSPFTDKKFID
FT                   WYIKTFSKTEKGSSLRRNELEEKSATSTSTTVKKVKIHFSVQYFDEFKVNGHEKSVVVQ
FT                   THKGEMTLDYYRKIGEVLSAIWKRGKSLAVPCFDYIKLGVEKAFHLAPVILKKYNLTID
FT                   DIINFIDKGPSYLAKLDKIDDWSLISKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA
FT                   NNLLKSDRDRLLKKALSANVSSPNTSSHEHVQKIVLNKVTR"
XX
SQ   Sequence 1677 BP; 551 A; 305 C; 293 G; 528 T; 0 other;
     atggctgaca taagactcga catagcgccc gatcttatcc ataatggtgt accccagaga        60
     ctttccgata caataatttt gaacaaccga ccaacaatca ctctgctatc tcatttcaac       120
     aatctatttc atgaattaaa cattgtcaaa tcaccccacg ttgcatcttc ccaaactacc       180
     gttaatttgt atattcgtaa gcatttgctg acccgacttc atgatagact gcaaaccgta       240
     gaaactagca ctttacccaa catcacgcaa cttaaagacc atattcgtag cttctttcaa       300
     aatgaacacc aacctatttt tcagactcta acgaacaacg acttaagtga agaatttgta       360
     ggtgtgacta cttttggact aagcttattt gctacctcca aacttgatgc tgaacaaata       420
     gaacgtgtac aaattgagac cctaactgaa ggaaacatta ctttgaagcc cttttccgct       480
     gatggtttag aagtcattct cgatgatagt tatattggta tagttggtaa aattccaggt       540
     ttagaagttc ataaattgct agataaatgt tgtcgtgaag ttcctgctca aatgggaata       600
     cttactgatg aagttaaact tttgatgcgt actggtaaat taagaattga tggtggttac       660
     gattttaatt gtcctgcaag cactacggat gttacacatt acggtggtta tgaccaattt       720
     tcacgtcaaa tgtttgaacg tttgaatcta ttttataata ttagccttag cataatcccc       780
     gtttcagctt tgaaaacagt tcatttattt gaaaaagaac taagtgtttt ggatgcagat       840
     aaatctttac tcgaacaaac ttggagcgca gtagcgtcat ttgttgaaac ttggcaggtt       900
     aaatctaaag ttaaagccga tgatccagat gaatatgaat tgaccagttt gtccacattg       960
     cgcactaatt acgatggcac ctctgcttcc agtcctttta cagataagaa attcatcgat      1020
     tggtacatta agactttttc taaaactgag aaaggatcgt cgttgcgtcg aaacgaatta      1080
     gaagagaaaa gtgccactag tacttcaact acagtaaaaa aggttaaaat tcatttctcc      1140
     gttcaatatt ttgatgaatt taaagttaat ggacatgaaa aaagcgttgt agttcaaact      1200
     cataaaggcg agatgacgtt agattattat cgtaaaattg gcgaagtgtt aagtgctatt      1260
     tggaaacgtg gtaaatcttt ggctgtacct tgttttgatt acattaaact tggcgttgag      1320
     aaagcatttc atttagcacc cgtaattctg aagaagtata acttgactat tgatgatatt      1380
     atcaacttca ttgataaagg accttcttat ttagctaaat tagacaagat tgatgattgg      1440
     tctctaattt caaagcttat cattactagc gttttaccta acatcattca agccgtttac      1500
     aaaaccgatc caagtaataa tgttatgaac tcagtaatta tcagtagagc gaacaattta      1560
     ttgaaatctg atagggacag gctattaaag aaggcacttt ccgccaacgt ttcttctcct      1620
     aacacatcta gtcatgaaca tgtacagaag atagtattaa acaaagtgac aagatga         1677
//