ID   JN008877; SV 1; linear; genomic RNA; STD; VRL; 1677 BP.
XX
AC   JN008877;
XX
DT   24-OCT-2011 (Rel. 110, Created)
DT   24-OCT-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Rice black streaked dwarf virus isolate JSnanjing1 major capsid protein
DE   gene, complete cds.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1677
RA   Gao R., Cheng Z., Ji Y., Zhou Y.;
RT   ;
RL   Submitted (23-MAY-2011) to the INSDC.
RL   Institute of Plant Protection, Jiangsu Academic of Agricultural Sciences,
RL   No. 50.Zhongling Road, Nanjing, Jiangsu 210014, China
XX
DR   MD5; c08553929f321c8f08d2da86a7d2461e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1677
FT                   /organism="Rice black streaked dwarf virus"
FT                   /segment="10"
FT                   /host="maize"
FT                   /isolate="JSnanjing1"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Jul-2010"
FT                   /db_xref="taxon:10990"
FT   CDS             1..1677
FT                   /codon_start=1
FT                   /product="major capsid protein"
FT                   /db_xref="InterPro:IPR008618"
FT                   /db_xref="UniProtKB/TrEMBL:G8FMH8"
FT                   /protein_id="AEQ75479.1"
FT                   /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNNLFHE
FT                   LNIVKAPHVASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKDHIRSFFQNEHQ
FT                   PIFQTLTNNDLSEEFVGVTTFGLSLFATSKLDAEQIERVQIETLTEGNITLKPFSADGL
FT                   EVILDDSYIGIVGKIPGLEVHKLLDKCCREVPAQMGILTDEVKLLMRTGKLRIDGGYDF
FT                   NCPASTTDVTHYGGYDQFSRQMFERLNLFYNISLSIIPRSALKTVHLFEKELSVLDADK
FT                   SLLEQTWSAVASFVETWQVKSKVKADDPDEYELTSLSTLRTNYDGTSTSSPFTDKKFID
FT                   WYIKTFSKTEKGSSLRRNELEEKSATNTSTTVKKVKIHFSVQYFDEFKINGHEKSIVVQ
FT                   THKGEMALDYYRKIGEVLSAIWKRGKSLAVPCFDYIKLGVEKAFHLAPVIMKKYNLTID
FT                   DIINFIDKGPSYLAKLDKIDDWSLISKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA
FT                   NNLLKSDRDRLLKKALSANVSSSNTSSHEHTQKIVLNKVTR"
XX
SQ   Sequence 1677 BP; 552 A; 307 C; 293 G; 525 T; 0 other;
     atggctgaca taagactcga catagcgccc gatcttatcc ataatggtgt accccagaga        60
     ctttccgata caataatttt aaacaaccga ccaacaatca ctctgttatc tcatttcaac       120
     aatctatttc atgaattaaa cattgtcaaa gcgccccacg ttgcatcttc tcaaactacc       180
     gttaatttgt acattcgcaa acacttgttg acccgacttc atgatagact gcaaaccgta       240
     gaaactagca ctttacccaa catcacgcaa cttaaagatc atattcgcag tttctttcaa       300
     aatgaacacc aacctatttt tcagacccta acgaacaacg acctaagcga agaatttgta       360
     ggtgtgacta cttttggact aagcttattt gctacctcca aacttgatgc tgaacaaata       420
     gaacgtgtgc aaattgagac cttaactgaa ggaaacatta cgttgaagcc cttttccgct       480
     gatggtttag aagtcattct cgatgatagt tatattggta tagttggcaa aattccaggt       540
     ttagaagttc ataaattgtt agataaatgt tgtcgtgaag ttcctgctca aatgggaata       600
     cttactgatg aagttaaact tttgatgcgt actggtaaat taagaattga tggtggttac       660
     gatttcaatt gtcctgcaag cactacagat gttacacact acggtggtta tgaccaattt       720
     tcgcgtcaaa tgttcgagcg tttgaatctc ttttataata ttagtcttag cataattccc       780
     cgttcagctt tgaaaacagt tcatttattc gaaaaagaat taagtgtttt ggatgcagac       840
     aaatctttac tcgaacagac ttggagcgca gtagcgtcat ttgttgaaac ttggcaagtt       900
     aaatctaaag ttaaagctga tgatcccgat gaatacgaac tgaccagttt gtccactttg       960
     cgtactaatt acgatggtac ttctacttct agtcctttta cagataagaa attcattgac      1020
     tggtatatta agactttttc taagactgaa aaaggatcgt ctttacgtcg aaatgaatta      1080
     gaagagaaaa gtgccactaa tacttcaact acagtaaaga aggttaaaat tcatttttct      1140
     gttcaatatt ttgacgaatt taaaattaat ggacacgaaa aaagcattgt agttcaaact      1200
     cataaaggtg aaatggcact agattattat cgtaaaattg gtgaagtatt aagtgcgatt      1260
     tggaaacgcg gtaaatcttt ggctgtacct tgttttgatt acattaaact tggcgttgaa      1320
     aaagcatttc atttggcacc cgtaattatg aagaagtata acttgacgat cgacgatatt      1380
     atcaacttca ttgataaagg accttcctat ttggctaagt tggacaaaat tgatgattgg      1440
     tctctaattt caaagcttat tattaccagt gttttaccta acattattca agctgtttat      1500
     aaaaccgatc caagtaataa tgttatgaac tcagtaatta tcagtagagc aaacaacttg      1560
     ttgaaatctg atagggacag gctattaaag aaggcacttt ccgccaacgt ttcttcctcc      1620
     aatacatcta gtcatgagca tacacagaag atagtactaa acaaagtgac aagatga         1677
//