ID   JF922966; SV 1; linear; genomic RNA; STD; VRL; 1884 BP.
XX
AC   JF922966;
XX
DT   05-OCT-2011 (Rel. 110, Created)
DT   05-OCT-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Squash mosaic virus isolate Tas-1 polyprotein 2 gene, partial cds.
XX
KW   .
XX
OS   Squash mosaic virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Comovirus.
XX
RN   [1]
RP   1-1884
RX   DOI; .1094/PDIS-05-11-0444.
RX   PUBMED; 30731671.
RA   Svoboda J., Leisova Svobodova L.;
RT   "First Report of Squash Mosaic Virus in Ornamental Pumpkin in the Czech
RT   Republic";
RL   Plant Dis. 95(10):1321-1321(2011).
XX
RN   [2]
RP   1-1884
RA   Leisova Svobodova L., Svoboda J.;
RT   ;
RL   Submitted (06-MAY-2011) to the INSDC.
RL   Molecular Biology, Crop Research Institute, Drnovska 507, Prague 161 06,
RL   Czech Republic
XX
DR   MD5; 88c31dba70dcc395f8b57301bbc3eb0b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1884
FT                   /organism="Squash mosaic virus"
FT                   /segment="RNA2"
FT                   /host="Cucurbita moschata"
FT                   /isolate="Tas-1"
FT                   /mol_type="genomic RNA"
FT                   /country="Czech Republic"
FT                   /collection_date="Aug-2010"
FT                   /db_xref="taxon:12263"
FT   CDS             <1..1872
FT                   /codon_start=1
FT                   /product="polyprotein 2"
FT                   /note="contains movement protein (MP), large coat protein
FT                   (CPL) and small coat protein (CPS)"
FT                   /db_xref="GOA:G4Y077"
FT                   /db_xref="InterPro:IPR003181"
FT                   /db_xref="InterPro:IPR003182"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:G4Y077"
FT                   /protein_id="AEP68801.1"
FT                   /translation="FVYKIGGDAKEGSNGSLTVNESQLSSHSPSAHVLHKHNNSGDNEV
FT                   EFSEIGVVVPGASRTKAYGQSELDLAQLSLDDTSSLRGSALQTKLATSRIILSKTMVGN
FT                   TVLREDLLATFLQDSNERAAIDLIRTHVIKGKIRCVASINVPENTGCALAICFNSGITG
FT                   AADTDIYTTSSQDAMVWNPACEKAVELSFNPNPCGDAWNFVFLQQTKAHFAVQCVTGWT
FT                   TTPLTDLALVLTWHIDRSLCVPKTLTISSAHTSFPINRWMGKLSFPQGPARILKRMPLA
FT                   IGGGAGAKDAILMNMPNAVISLHRYFRGDFVFEITKMSSPYIKATIAFFIAFGDITEEM
FT                   TNLESFPHKLVQFAEIQGRTTITFTQSEFLTAWSTQVLSTINPQKDGCPHLYALLHDSA
FT                   TSTIEGNFVIGVKLLDIKNYRAYGHNPGFEGARLLGISGQSTMVQQLGTYNPIWMVRTP
FT                   LESTAQQNFASFTADLMESTVSGDSTGNWSITVYPSPIANLLKVAAWKKGTIRFQLICR
FT                   GAAVKQSDWAASARIDLVNNLSNKALPARSWYITKPRGGDIEFDLEIAGPNNGFEMANS
FT                   SWAFQTTWYLEIAIDNPKQFTLFELNACLMEDFEVAGNILNPPILLS"
XX
SQ   Sequence 1884 BP; 515 A; 366 C; 430 G; 573 T; 0 other;
     tttgtgtaca agattggtgg agatgcaaaa gaaggcagca atggtagttt gactgttaat        60
     gagagccaat tgtcatcaca ttctccctct gcacatgttt tgcacaagca caacaacagt       120
     ggtgacaacg aagtagaatt ttcagaaatt ggtgtagttg taccaggtgc tagcagaacc       180
     aaagcttatg gccaaagtga gctagatctt gcgcaacttt ctttggatga taccagttcc       240
     cttcgtggat ctgcgttgca aactaaatta gccacatccc gtatcatttt gagcaagaca       300
     atggttggga acactgtgct tagggaagat ttgctcgcca ctttcttgca agatagtaat       360
     gagagggctg ctatagattt gatccgcacc catgttataa aaggcaaaat acgttgtgtt       420
     gcttctatta atgttccaga gaatacaggc tgtgcattgg ccatctgttt taacagcggt       480
     ataacaggag ctgccgatac agatatatac actacgagtt cccaggatgc tatggtgtgg       540
     aatcctgctt gtgagaaagc tgttgagtta tcatttaatc ccaatccttg tggcgatgct       600
     tggaattttg tgtttctaca acaaacaaag gcacattttg cagttcagtg tgtgactggg       660
     tggactacaa caccacttac agatttagca ctggtgctta catggcatat cgatagaagt       720
     ctgtgtgtgc ctaaaacctt gacgattagt tctgcacata cctcttttcc aattaatcgc       780
     tggatgggaa aactatcctt tccgcaaggg cctgcacgca ttcttaaaag gatgccttta       840
     gccattggtg gtggggctgg tgctaaagat gctattctga tgaatatgcc aaatgctgtt       900
     atctcgcttc atcgttactt tagaggagat ttcgtttttg aaataacaaa aatgagttct       960
     ccttacataa aggcaactat tgctttcttt atagcatttg gcgatattac agaggaaatg      1020
     actaatttgg agagttttcc ccacaagctt gtgcagtttg ctgaaattca ggggcgcact      1080
     actataacat tcacgcaaag tgaatttctt acggcatggt ccacacaagt tttgagcact      1140
     atcaatcctc agaaagatgg gtgtccccac ttgtatgcac tcttgcatga ctctgctacc      1200
     tcaaccattg aaggaaattt cgtcattggt gttaaactgc tagatataaa gaattatcgt      1260
     gcttatggtc ataaccctgg ctttgaggga gcccgcctgt tagggatttc tgggcagagt      1320
     accatggtac agcagcttgg aacttataat ccaatttgga tggttcgtac gcccttagag      1380
     agtacagccc aacaaaattt tgcgagtttc actgctgatt tgatggaatc cacggtaagt      1440
     ggggattcta ctggaaattg gagtattaca gtttacccga gtcctatagc caatttgttg      1500
     aaagtggctg cctggaagaa gggaacgata agattccagc tcatttgtcg gggcgctgct      1560
     gttaaacagt ctgactgggc tgcgtcagcc aggatagatt tggttaataa tctttcaaac      1620
     aaggctttac ccgcgcgctc ttggtatatt actaagccac gaggaggaga tattgagttt      1680
     gacttagaga tagcgggacc aaacaatggt tttgaaatgg cgaactccag ttgggctttt      1740
     caaactacat ggtatttgga aattgccata gacaacccta aacaatttac tctttttgag      1800
     ttaaatgctt gtcttatgga agattttgaa gtggctggaa atatcttgaa tccacctatt      1860
     ttgctttctt agtcctttat tatt                                             1884
//