ID JF909218; SV 1; circular; genomic DNA; STD; VRL; 2770 BP. XX AC JF909218; XX DT 21-JUN-2012 (Rel. 113, Created) DT 05-DEC-2012 (Rel. 115, Last updated, Version 2) XX DE East African cassava mosaic Kenya virus isolate DE Comoros:Grande-Comore:GC40AF3:2009 segment DNA-B, complete sequence. XX KW . XX OS East African cassava mosaic Kenya virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2770 RX DOI; 10.1186/1471-2148-12-228. RX PUBMED; 23186303. RA De Bruyn A., Villemot J., Lefeuvre P., Villar E., Hoareau M., RA Harimalala M., Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B., RA Harkins G.W., Varsani A., Martin D.P., Lett J.M.; RT "East African cassava mosaic-like viruses from Africa to Indian ocean RT islands: molecular diversity, evolutionary history and geographical RT dissemination of a bipartite begomovirus"; RL BMC Evol. Biol. 12(1):228-228(2012). XX RN [2] RP 1-2770 RA Villemot J., Lefeuvre P., Villar E., Hoareau M., Abdoul-Karime A.L., RA Abdou-Chakour C., Reynaud B., Varsani A., Martin D.P., Lett J.-M.; RT ; RL Submitted (24-MAR-2011) to the INSDC. RL UMR PVBMT, CIRAD, 7, chemin de l'IRAT, Saint-Pierre, Reunion 97410, France XX DR MD5; 4ea251d617d1a381d9afdfcd02f40c51. XX FH Key Location/Qualifiers FH FT source 1..2770 FT /organism="East African cassava mosaic Kenya virus" FT /segment="DNA-B" FT /host="Manihot esculenta (cassava)" FT /isolate="Comoros:Grande-Comore:GC40AF3:2009" FT /mol_type="genomic DNA" FT /country="Comoros:Grande-Comore" FT /lat_lon="11.83 S 43.29 E" FT /collection_date="2009" FT /db_xref="taxon:393599" FT gene 360..1136 FT /gene="BV1" FT CDS 360..1136 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /db_xref="GOA:I6LZG2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:I6LZG2" FT /protein_id="AEG90569.1" FT /translation="MYSGYRRGYKTPYRSPYGARGTPYVYRKTSGKQASKSRVPRKLAY FT ESPKSLYTRRSLEDIHNGASLKLPQQGDYTSYVTLPCRGIDGNGGRSVDHIKLLSLRVS FT GTVNVSQFGGDENMGERTTMRGIFFMACLVDKKPFVPEGVSILPTFNELFGEYESVYGM FT PRLKENVRHRYRVIGTSKLYITTDEDHIQKPFSLRRRLSGGKYPMWSSFKDVDNSSTGG FT NYKNINKNAILVSYVWVSLCRTTCDVYSQFVLNYVG" FT gene complement(1265..2188) FT /gene="BC1" FT CDS complement(1265..2188) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:I6LZG5" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:I6LZG5" FT /protein_id="AEG90570.1" FT /translation="MDNQFTVTDNNYINSKRTEYALTNDAAPINLQFPSSFEQATMRLK FT GRCMKIDHIIIEYRNQVPFNATGSVIVEIRDNRVSLEDAAQAAFTFPIACNVDLHYFSS FT TYFSISEPSPWKIMYRVEDSNVIEGVKFASIKAKLRLSSAKHSTDIRFKPPTINILSKG FT YTKDCIDFWSVEKGEIRRRLLNPTPTAHGPRPIAHRPITILPGETWATKSQIGLPSSSG FT PARLEHFRSQSMRMDPSTIPTDLDNDSTEYPYQKLHRLHTPELDPGDSVSQAPSDSISR FT KDLETLLESTINKCLIKIKSDAPRQL" XX SQ Sequence 2770 BP; 775 A; 446 C; 739 G; 810 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gatcccacaa tggaccccac gcacaaagta 60 atgtcagcca ataatattca agacgggaag actcggtagg tacgcatgaa tgaataagtg 120 ggccctacgg acgaattgtg acaggcaatt ttattgctat gtgtgtatca tattcgtata 180 ggtgtgctac tggccaatct aaatttatgt tatggggcct atcataaaaa cgcgaaatag 240 aggtacgtat ggtcatattg attatagttt tatttgcgga tatatgagcc gccacgtgtt 300 tacaatggat atggatcgtc ctataaatat tatgtatggc tcccgttctg taatgcaaga 360 tgtattctgg ttacagacgt gggtataaga ctccgtatag gagtccgtat ggcgcgcgtg 420 gaacaccata tgtgtatcgt aagacctctg gtaaacaggc gtctaaatct cgtgtacctc 480 gaaagttggc gtatgaatcg ccaaaaagtc tatatacacg acgctcattg gaggatatcc 540 ataatggggc ttccttgaag ttgccgcaac agggggatta tacgtcctac gtgacactcc 600 catgtcgagg tatcgatggt aacgggggta ggtctgttga tcatataaag ttattaagct 660 tgagggtttc tgggaccgtc aacgtcagtc aatttggtgg tgatgagaat atgggagaga 720 gaacgaccat gaggggtatt tttttcatgg cttgtcttgt tgataagaaa cctttcgttc 780 cagagggggt cagcatattg ccgacgttca atgagttgtt cggggaatat gaatccgtgt 840 atggcatgcc taggttgaag gaaaacgtcc gtcaccggta tcgcgttatt gggacgtcga 900 aattatatat aacgaccgat gaagatcaca tccagaagcc ttttagtcta cgtcgaagac 960 taagtggagg gaaatatcct atgtggtcgt cgttcaagga tgtggataat agtagtacag 1020 gtggtaacta taaaaatata aataagaacg ctatactagt gagttatgtg tgggtatcgc 1080 tatgtcggac cacgtgtgat gtgtattcgc agtttgtact taattacgtc ggttgataat 1140 aaaacgatat aagtgtgttg acaagaatga tgtttgaact aacgaaacat gagattaaca 1200 tcaatgggaa gcatatagaa gtttattatg gttcgaatca aatatggtac atattaagtg 1260 tttattacaa ttgccttggt gcgtcggact ttattttgat gagacacttg tttatggtac 1320 tctcaagcag tgtctcgagg tcctttctgg atattgagtc ggatggggcc tgtgataccg 1380 agtccccggg gtctaattcg ggtgtgtgta atctgtgtag tttttggtaa ggatattcgg 1440 tggagtcgtt gtctaagtct gttggtattg tcgatgggtc cattctcatg gactgtgaac 1500 gaaagtgttc cagccttgct gggcctgatg agcttggtag cccaatctga gactttgtgg 1560 cccatgtttc tccaggtagg atggtgatgg gcctgtgggc tatgggtcgt ggaccatgag 1620 cagtcggagt tggatttagt aatctccgtc ttatttctcc tttttccacg gaccagaagt 1680 ctatgcagtc ttttgtgtat cccttggata aaatgttaat tgttgggggt ttgaaacgta 1740 tgtccgtgga atgtttggcc gacgataatc tgagcttggc cttgatggat gcgaatttca 1800 cgccttctat gacgttggag tcttcgactc tgtacattat tttccaaggg gagggttctg 1860 aaatcgaaaa atatgtagaa gagaagtagt ggaggtctac gttgcaagcg attgggaaag 1920 tgaatgctgc ttgagctgcg tcttcaaggc tgacgcgatt gtctcggatt tctacgataa 1980 cagacccagt tgcgttaaat gggacttggt ttcggtattc aattataatg tggtcgattt 2040 tcatacatcg gcctttgagt cgcatggtag cctgctcgaa tgagctgggg aactggagat 2100 tgattggtgc agcatcgttt gttaatgcgt actctgtgcg tttgctgttt atgtaattat 2160 tgtctgtgac ggtgaattgg ttgtccattc tatgaaggaa aaaaacaaga gtgagtaaac 2220 ggagagaaga taggtataaa agtcataaca aagttaataa aaatgtcttg tagacatgga 2280 agcatatatg catttgttat atataataac acactaaatc agaacaagga tcatatatgt 2340 gtaactggcc gcgcagcgga ttggaggtta gataaatctg ctgataaaga aaaaaggcga 2400 atggggtaat atgatttaaa ccacttactg aatcactgat gaagcagtct ggagtgaata 2460 cctgttccaa tttggagaaa acaaagaaag aaaagtagaa ctgattagga gaaaaaaagg 2520 aaagtgagca gatgttatgt gtggtgtcgt taaatgatat gctatgaggt gtttatatag 2580 gcgttaataa gcgacacgtg gtatagagag agaaagaaga gagaggcgag agcaatcggg 2640 gggcactcaa agtctgtagc aatcggggga atgggggggc aatttatatg atgcccccca 2700 aatggcattt atgtaatatc ctcatgaaat ttgaatttca aacgtggaaa gcggccatcc 2760 gtataatatt 2770 //