ID JF909213; SV 1; circular; genomic DNA; STD; VRL; 2744 BP. XX AC JF909213; XX DT 21-JUN-2012 (Rel. 113, Created) DT 05-DEC-2012 (Rel. 115, Last updated, Version 2) XX DE East African cassava mosaic Kenya virus isolate DE Comoros:Grande-Comore:GC07AI3:2008 segment DNA-B, complete sequence. XX KW . XX OS East African cassava mosaic Kenya virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2744 RX DOI; 10.1186/1471-2148-12-228. RX PUBMED; 23186303. RA De Bruyn A., Villemot J., Lefeuvre P., Villar E., Hoareau M., RA Harimalala M., Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B., RA Harkins G.W., Varsani A., Martin D.P., Lett J.M.; RT "East African cassava mosaic-like viruses from Africa to Indian ocean RT islands: molecular diversity, evolutionary history and geographical RT dissemination of a bipartite begomovirus"; RL BMC Evol. Biol. 12(1):228-228(2012). XX RN [2] RP 1-2744 RA Villemot J., Lefeuvre P., Villar E., Hoareau M., Abdoul-Karime A.L., RA Abdou-Chakour C., Reynaud B., Varsani A., Martin D.P., Lett J.-M.; RT ; RL Submitted (24-MAR-2011) to the INSDC. RL UMR PVBMT, CIRAD, 7, chemin de l'IRAT, Saint-Pierre, Reunion 97410, France XX DR MD5; f97c391a6fa7ac5588c6abbefc54e6f2. XX FH Key Location/Qualifiers FH FT source 1..2744 FT /organism="East African cassava mosaic Kenya virus" FT /segment="DNA-B" FT /host="Manihot esculenta (cassava)" FT /isolate="Comoros:Grande-Comore:GC07AI3:2008" FT /mol_type="genomic DNA" FT /country="Comoros:Grande-Comore" FT /lat_lon="11.89 S 43.45 E" FT /collection_date="2008" FT /db_xref="taxon:393599" FT gene 337..1137 FT /gene="BV1" FT CDS 337..1137 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /db_xref="GOA:I6LZF2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:I6LZF2" FT /protein_id="AEG90559.1" FT /translation="MSPVLQCKMYSVYRRGYKTPYRSPYGSRVTPYVNRKTSVKQTVKS FT RISRRLAYEAPKGPYTRRSLEDIHNGASLKLSQQGDYTSYVTLPCRGIDGNGGRSVDHI FT KLLSLRVTGTVNISQSGGDDNMGDRTTMRGIFFMACLVDKKPFVPEGVSILPTFNELFG FT EYESVYGMPRLKENVRHRYRVIGTSKLYITTDEEHIQKPFSLRRRLSGGKYPMWSSFKD FT VDNSSTGGNYKNINKNAILVTYVWVSLCRTTCDVYSQCVLNYVG" FT gene complement(1267..2256) FT /gene="BC1" FT CDS complement(1267..2256) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:I6LZF3" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:I6LZF3" FT /protein_id="AEG90560.1" FT /translation="MSTRLLYIYFLRFLTFVFVIHRMDNQFTVTDNTYINSKRTEYALT FT NDAAPINLQFPSSFEQATMRLKGRCMKIDHIIIEYRNQVPFNDTGSVIVEIRDNRVSLE FT DAAQAAFTFPIACNVDLHYFSSTYFSISEPSPWRIMYRVEDSNVIEGVKFASIKAKLRL FT SSAKHSTDIRFKPPTINILSKGYTKDCIDFWSVEKGETRRRLLNPTPTANDQQPITHRP FT ITILPGETWATKSQIGQPSSSGPARLAHFRSQSMRMDPSTTPTDLDTESTEYPYQRLHR FT LHTPDLDPGDSVSQAQSDSVSRKDLETLLESTINKCFIKIKSEAPRPL" XX SQ Sequence 2744 BP; 760 A; 458 C; 724 G; 802 T; 0 other; accggatggc cgcgcccgaa agaaagtagg tggaccccac aatggcccca cgcactaagt 60 aatgtcagcc aaccatgtgc aagacagggt gacgcggtag ttacgcatgg atgattaagt 120 gggccctacg cactaagttt gacaggcaat tgtattgctc tgtgtgtatc atatttttat 180 aggtgtgcca cgggtcaatc taaagttatg ttatggggtc tatcataaaa aagcaaaata 240 taggtcccta tttacatatt gattatattt ttatgtgcgg atatatgatt tgccacgtgg 300 gtataatgga tatggattgt cctataaata tgttgcatgt ctcccgttct tcaatgcaaa 360 atgtattctg tgtacagacg tgggtataag acgccgtata ggagtccgta tggctctcgt 420 gtaacaccat atgttaatcg taagacctct gttaaacaga cggttaaatc acgtatatcg 480 cgaaggttgg cgtatgaagc tccaaaaggt ccatatacgc gacgctcatt ggaggatatc 540 cataatgggg cttccttgaa gttgtctcaa cagggggatt atacgtccta cgtgacactc 600 ccatgtcgag gtatcgatgg taatgggggt aggtcggtgg atcatataaa attattaagc 660 ttgagggtta ctgggaccgt caacatcagt caatccggtg gtgatgacaa tatgggagat 720 agaacgacca tgaggggtat ttttttcatg gcttgtcttg ttgataagaa acctttcgtt 780 ccagaggggg tcagcatatt gccgacgttc aatgagttgt tcggggaata tgaatccgtg 840 tatggcatgc ctaggttgaa ggaaaacgtc cgtcaccgtt atcgcgtgat tgggacgtcg 900 aaattatata taacgaccga tgaagagcac atccagaagc cttttagtct acgtcgaaga 960 ctaagtggag ggaaatatcc tatgtggtcg tcgttcaagg atgtggataa tagtagtaca 1020 ggtggtaact ataaaaatat aaataagaac gctatactcg ttacttatgt gtgggtttcg 1080 ctatgtcgga ccacgtgtga tgtgtattcg cagtgtgtac ttaattacgt cggttgataa 1140 taaaactaat aagtgtttta tggacattaa ttatgttgga acgaactaaa caagagagga 1200 acattaatgg gaagcatata gagttttatt atgttccgaa gcaaatatgc tacataaaat 1260 ggtttattac aatggccttg gtgcttcgga ttttatcttt ataaagcatt tgttgatggt 1320 actctcaagc agtgtctcga ggtcctttct ggatactgag tcggattggg cctgtgatac 1380 cgagtcccct gggtctaaat ctggtgtgtg taatctgtgt aatctctgat aaggatattc 1440 tgtggactcg gtgtctaagt ctgttggtgt tgtcgatggg tccattcgca tggactgtga 1500 acgaaagtgt gccagccttg ctgggccgga tgagcttggt tgcccaatct gagactttgt 1560 ggcccatgtc tctccaggta ggatggtgat gggcctgtgg gttatgggtt gttgatcatt 1620 agcagttgga gtgggattta gtaatctccg tcttgtttca cctttttcca cggaccagaa 1680 gtctatgcag tcttttgtgt atcccttgga taagatgtta atggttgggg gtttgaaacg 1740 tatgtccgtg gaatgtttgg ccgatgataa tctgagcttg gccttgatgg atgcgaattt 1800 cacgccttcg atgacgttgg agtcttcgac tctgtacatg attctccaag gggagggttc 1860 tgaaatcgag aaatatgtag aagagaagta gtggaggtct acgttgcaag ctattgggaa 1920 agtgaatgct gcttgagcgg cgtcttcaag gctgacgcga ttgtctctga tttctacgat 1980 aaccgaccca gtgtcgttaa atgggacttg gtttcggtat tcaattataa tgtggtcgat 2040 cttcatacat cggcctttga gtcgcatggt agcctgctcg aatgagcttg ggaattggag 2100 attgattggt gcagcatcgt ttgttaatgc gtactcagtg cgtttgctgt ttatgtaagt 2160 attgtctgtg acggtgaatt ggttgtccat tctatgaatg acaaatacaa aggttaagaa 2220 acggagaaaa tagatatata aaagtcgtgt agacatggaa gcatatatgc atttgtcata 2280 tataagaaca cactaaatca gaacaaggat catatatgat taaccggccg cgcagcggat 2340 tggaattcag ataaatgtgc taacaaataa aaaagtcgaa tggggtgatg tgatttaaat 2400 cacttaccga atcactgatg aagcagactg gagtgaatgc cggtgccaag tgggagaaaa 2460 caaagaaata aaaagtcgaa cgtattggga taaaaaggaa agtgagcaga tgttaacgcc 2520 gtggcgttaa atgatatgct atagggtgtt tatataggcg ttaataagtg acacgtggta 2580 gagagagaaa gaagagagag gcgagagcat tcgggggaca ctcaaactct ctagcaatcg 2640 ggggaacggg gggcaattta tatgatgccc cctaaatggc atttatgtaa tatcctcaat 2700 gaatttgaaa ttcaaacgtg gaaagcggcc atccgtataa tatt 2744 //