ID JF909162; SV 1; circular; genomic DNA; STD; VRL; 2801 BP. XX AC JF909162; XX DT 21-JUN-2012 (Rel. 113, Created) DT 05-DEC-2012 (Rel. 115, Last updated, Version 3) XX DE East African cassava mosaic virus-Kenya isolate DE Seychelles:Praslin:SC22B15:2009 segment DNA-A, complete sequence. XX KW . XX OS East African cassava mosaic virus-Kenya OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2801 RX DOI; 10.1186/1471-2148-12-228. RX PUBMED; 23186303. RA De Bruyn A., Villemot J., Lefeuvre P., Villar E., Hoareau M., RA Harimalala M., Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B., RA Harkins G.W., Varsani A., Martin D.P., Lett J.M.; RT "East African cassava mosaic-like viruses from Africa to Indian ocean RT islands: molecular diversity, evolutionary history and geographical RT dissemination of a bipartite begomovirus"; RL BMC Evol. Biol. 12(1):228-228(2012). XX RN [2] RP 1-2801 RA Villemot J., Lefeuvre P., Villar E., Hoareau M., Harimalala M., RA Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B., Varsani A., Martin D.P., RA Lett J.-M.; RT ; RL Submitted (24-MAR-2011) to the INSDC. RL UMR PVBMT, CIRAD, 7, chemin de l'IRAT, Saint-Pierre, Reunion 97410, France XX DR MD5; 23b8068fe3799bca39143aa84cc9d936. XX FH Key Location/Qualifiers FH FT source 1..2801 FT /organism="East African cassava mosaic virus-Kenya" FT /segment="DNA-A" FT /host="Manihot esculenta (cassava)" FT /isolate="Seychelles:Praslin:SC22B15:2009" FT /mol_type="genomic DNA" FT /country="Seychelles:Praslin" FT /lat_lon="4.35 S 55.76 E" FT /collection_date="2009" FT /db_xref="taxon:1229189" FT gene 174..530 FT /gene="AV2" FT CDS 174..530 FT /codon_start=1 FT /gene="AV2" FT /product="movement protein" FT /db_xref="GOA:I6LX59" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:I6LX59" FT /protein_id="AEG90306.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCP" FT gene 334..1107 FT /gene="AV1" FT CDS 334..1107 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:I6LYP8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:I6LYP8" FT /protein_id="AEG90305.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRMNNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT gene complement(1104..1508) FT /gene="AC3" FT CDS complement(1104..1508) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:I6LYQ2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:I6LYQ2" FT /protein_id="AEG90309.1" FT /translation="MDSRTGELITAPQAKNGAFTWEITNPLYFAITNHDKRPGNMNHDI FT ITLQIRFNHNLRKALGIHKCFLNFKVWTTLRPQTGRFLRVFRYQVLKYLDMIGVISINT FT VLRAVDHVLYDVLLNTLQVTETHEIKFNIY" FT gene complement(1249..1656) FT /gene="AC2" FT CDS complement(1249..1656) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:I6LYQ1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:I6LYQ1" FT /protein_id="AEG90308.1" FT /translation="MPPSSPSKSHCSPVPIKVQHRTAKHRALRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGNNKSPLFRNHQPRQEAREHEPRHHHTPDTIQPQ FT PPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT gene complement(1571..2644) FT /gene="AC1" FT CDS complement(1571..2644) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:I6LYQ0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I6LYQ0" FT /protein_id="AEG90307.1" FT /translation="MPRVGRFQINAKNYFITYPRCSLTKEEVLSQLKALSYPTNIKFIR FT VCRELHQDGVPHLHVLIQFEGKFQCTNQRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI FT EKGGEFLDDGIFQVDARSARGEGQHLAQVYADALNASSKSEALQIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTDVPDDVEIWVSENICSPAARPWRPISIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNQSLKAWALKNATFVSLQEPL FT FSSAHQSPTPHSEAQGT" FT gene complement(2254..2487) FT /gene="AC4" FT CDS complement(2254..2487) FT /codon_start=1 FT /gene="AC4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:I6LYQ3" FT /protein_id="AEG90310.1" FT /translation="MGCLISMFSSNSKASSNVQTSDSSISFPHPDQHISIRTFRELSHH FT PMSKLTLKREGNFLTMEFSRSMPEVHGERASI" XX SQ Sequence 2801 BP; 734 A; 567 C; 710 G; 790 T; 0 other; accggatggc cgcgcccgaa aaagcatgtg gaccccatca taagcacgcg cccgtcaaag 60 aaagtggtcc ccgcgcactt gttgcggtcg gccagtcata ttcacgcgtg aaagtctaga 120 tacttgtttt ttgtcgttat agacttcgtc gcgaagtagt gaagcgcgtc aacatgtggg 180 atccattgtt gaacgatttc cctgaaaccg ttcacggttt ccgttctatg cttgctgtta 240 aatacttgtt acatcttgaa caggaatacg atcgcggtac tgtcggggcg gagtatatac 300 gggatctaat aggggttcta cggtgtaaga gttatgtcga agcgaccagg agatataata 360 atctcaacac ccgtatccaa ggtgcggagg aggctgaact tcgacagccc atacacgaac 420 cgtgttgttg cccccactgt ccgcgtcacc agaagcaaaa tatgggccaa caggcccatg 480 tatcggaagc ccaagatgta cagaatgtat cgaagcccag atgtccctaa gggctgtgaa 540 ggcccatgta aggttcagtc ttatgaacag agggatgatg tgaagcacac tggtatggtt 600 cgatgtgtta gtgatgttac tcgtgggtca ggcattaccc atagagtcgg gaagaggttc 660 tgtgtgaagt ccatatatat attgggcaag atctggatgg atgagaatat caagaagcaa 720 aatcatacga accatgttat gttcttcctc gttcgagata gaaggcctta tgggccgagc 780 ccgcaagatt ttggacaagt gttcaacatg tttgacaatg aaccgactac cgcaactgtg 840 aagaatgatc ttagggaccg gtatcaggtg ttacgaaaat tctatgcgac tgttgttggg 900 ggaccctccg ggatgaagga acaagctctg gttaagaggt tttttaggat gaataatcat 960 gttgtgtata atcatcagga acaggccaag tatgagaatc atactgagaa tgcgttgtta 1020 ttgtatatgg catgtacaca tgcctcaaat ccagtgtacg ctacgctgaa aatacgcatc 1080 tatttctatg atgcagtgac aaattaataa atattaaatt ttatttcatg agtctccgta 1140 acttggagtg tgtttagtaa tacatcgtac agaacatgat caaccgctcg aagtacagtg 1200 ttaatggaaa taacgcctat catatctaaa tacttgagca cctgatatct aaatactctt 1260 aagaaacgac cagtctgagg ccgtaaggtc gtccagacct tgaagttgag aaaacacttg 1320 tgaatcccca atgccttccg gaggttgtgg ttgaatcgta tctggagtgt gatgatgtcg 1380 tggttcatgt tccctggcct cttgtcgtgg ttggtgattg cgaaatagag gggatttgtt 1440 atttcccagg taaaagcgcc attctttgct tgaggcgcag tgatgagttc ccctgtgcga 1500 gaatccatgg ttgatgcagt cgatatggag atagaacgag cagccgcatt cgaggtctac 1560 ccgcctacgt ctaagtgccc tgtgcttcgc tgtgcggtgt tggactttga tgggcactgg 1620 agaacaatgg ctcttggagg gagacgaagg tggcattctt taaagcccag gctttaaggg 1680 actgattctt ttcctcgtcc agaaactctt tatatgatga tgttggtcct ggattgcaga 1740 ggaagatagt gggaatgccg cctttaattt gaattggctt cccgtacttc gtattgcttt 1800 gccagtccct ttgggccccc atgaactctt tgaaatgctt tagataatgc gggtctacgt 1860 cgtcaatgac gttgtaccat gcgtcgtttg aatatacctt tggagacaga tccaggtgtc 1920 cacatagata attatggggt ccaagtgaac gagcccacat ggttttccct gttcggctat 1980 caccttctag aacaatactg atcggtctcc atggccgcgc agcgggactg catatattct 2040 ccgataccca tatttctacg tcgtctggga cgtctgtaaa tgatgaggat aagaacggac 2100 taacgtaagt ttgtggcgga gcctggaaga ttctatctgc gttagcagat atgttatgga 2160 actgtaaaaa aaatgacttt ggatcttttt ccttaatgat ctgaagagct tcggatttag 2220 aagaagcatt caacgcgtct gcatatacct gagctaaatg ctggccctct ccccgtgcac 2280 ttctggcatc gacctggaaa attccatcgt caagaaattc ccctcccttt tcaatgtaag 2340 ctttgacatc ggatgatgac ttagctccct gaatgttcgg atggaaatgt gttgatcggg 2400 atggggaaat gagatcgaag aatcgctggt ttgtacattg gaacttgcct tcgaattgga 2460 tgagaacatg gagatgaggc accccatcct gatgtagttc tctgcaaacc ctaatgaatt 2520 ttatattcgt cgggtaagaa agggctttta attgggaaag gacctcttcc tttgttaatg 2580 agcatcgggg ataggtgatg aaataatttt tggcattgat ttgaaaacga cctactctgg 2640 gcatagttgc tgtcgttttg aatcggggga cactcaaagt ctgtggcaat cggtggaacg 2700 gggggcaatt tatatgatgt cccccaatgg catatgtgta aataggtcga cttccatttg 2760 aaatttaaat gtcgaatatt ggcggccatc cgattaatat t 2801 //