ID JF909155; SV 1; circular; genomic DNA; STD; VRL; 2802 BP. XX AC JF909155; XX DT 21-JUN-2012 (Rel. 113, Created) DT 05-DEC-2012 (Rel. 115, Last updated, Version 3) XX DE East African cassava mosaic virus-Kenya isolate DE Seychelles:Mahe:SC10AS1:2004 segment DNA-A, complete sequence. XX KW . XX OS East African cassava mosaic virus-Kenya OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2802 RX DOI; 10.1186/1471-2148-12-228. RX PUBMED; 23186303. RA De Bruyn A., Villemot J., Lefeuvre P., Villar E., Hoareau M., RA Harimalala M., Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B., RA Harkins G.W., Varsani A., Martin D.P., Lett J.M.; RT "East African cassava mosaic-like viruses from Africa to Indian ocean RT islands: molecular diversity, evolutionary history and geographical RT dissemination of a bipartite begomovirus"; RL BMC Evol. Biol. 12(1):228-228(2012). XX RN [2] RP 1-2802 RA Villemot J., Lefeuvre P., Villar E., Hoareau M., Harimalala M., RA Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B., Varsani A., Martin D.P., RA Lett J.-M.; RT ; RL Submitted (24-MAR-2011) to the INSDC. RL UMR PVBMT, CIRAD, 7, chemin de l'IRAT, Saint-Pierre, Reunion 97410, France XX DR MD5; 8616e8a06f279ae5a4c1fb93b9544ca9. XX FH Key Location/Qualifiers FH FT source 1..2802 FT /organism="East African cassava mosaic virus-Kenya" FT /segment="DNA-A" FT /host="Manihot esculenta (cassava)" FT /isolate="Seychelles:Mahe:SC10AS1:2004" FT /mol_type="genomic DNA" FT /country="Seychelles:Mahe" FT /lat_lon="4.76 S 55.51 E" FT /collection_date="2004" FT /db_xref="taxon:1229189" FT gene 175..531 FT /gene="AV2" FT CDS 175..531 FT /codon_start=1 FT /gene="AV2" FT /product="movement protein" FT /db_xref="GOA:I6LX59" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:I6LX59" FT /protein_id="AEG90264.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCP" FT gene 335..1108 FT /gene="AV1" FT CDS 335..1108 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:I6LX52" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:I6LX52" FT /protein_id="AEG90263.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT gene complement(1105..1509) FT /gene="AC3" FT CDS complement(1105..1509) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:I6LYK4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:I6LYK4" FT /protein_id="AEG90267.1" FT /translation="MDSRTGELITAPQAKNGVFTWEITNPLYFEITNHDERPGNMNHDI FT ITLQIRFNYNLRKTLGIHKCFLNFKVWTTLRPPTGRFLRVFRYQVLKYLDMIGVISINT FT VLQAVDHVMYDVLLNTLQVTETHEIKFNIY" FT gene complement(1250..1657) FT /gene="AC2" FT CDS complement(1250..1657) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:I6LYK9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:I6LYK9" FT /protein_id="AEG90266.1" FT /translation="MPPSSPSTSHCSLVPIKVQHRTAKTRALRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGNNKSPLFRNHQPRREAREHEPRHHHTPDTVQLQ FT PPENIGDSQMFSQLQGLDDLTASDWSFLKSI" FT gene complement(1581..2645) FT /gene="AC1" FT CDS complement(1581..2645) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:I6LYK8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I6LYK8" FT /protein_id="AEG90265.1" FT /translation="MPRVGRFQINAKNYFITYPRCSLTKEEVLSQLKTLSYPTHIKFIR FT VCRELHQDGVPHIHVLIQFEGKFQCTNQRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI FT EKGGEFLDDGIFQIDARSARGEGQHLAQVYADALNASSKSEALQIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTDVPDDVEVWVSENICSPAARPWRPISIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLEEEKNQSLKAWALKNATFVTLHEPL FT FSSAHQSPTPHSED" FT gene complement(2255..2488) FT /gene="AC4" FT CDS complement(2255..2488) FT /codon_start=1 FT /gene="AC4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:I6LYL1" FT /protein_id="AEG90268.1" FT /translation="MGCLISMFSSNSKASSNVQTSDSSISFPHPDQHISIRTFRELSPR FT PMSKLTLKRAGNFLTMEFSRSMPEVHGERASI" XX SQ Sequence 2802 BP; 738 A; 558 C; 707 G; 799 T; 0 other; accggatggc cgcgcccgga aaaagcatgt ggatcccacc ataagcacgc gctcgtaaaa 60 gaaagtggtc ccgcgcactt gtttcggtcg gccagtcata ttcacgcgtg aaagtctaga 120 tatttgtttt tttgtcgtta tagacttcgt cgcgaagtag tgaggcgcgt caacatgtgg 180 gatccattgt tgaacgattt ccctgaaacc gttcacggtt tccgttctat gcttgctgtt 240 aaatacctgt tacatcttga acaggaatac gatcgcggta ctgtcggggc ggagtatata 300 cgggatctaa taggggttct acggtgtaag agttatgtcg aagcgaccag gagatataat 360 aatctcaaca cccgtatcca aggtgcggag gaggctgaac ttcgacagcc catacacgaa 420 ccgtgttgtt gcccccactg tccgcgtcac cagaagcaaa atatgggcca acaggcccat 480 gtatcggaag cccaagatgt acagaatgta tcgaagccca gatgtcccta agggctgtga 540 aggcccatgt aaggttcagt cttatgaaca gagggatgat gtgaagcaca ctggtatggt 600 ccgatgtgtc agtgatgtta ctcgtgggtc aggcattacc catagagtcg ggaagaggtt 660 ctgtgtgaag tccatatata tattgggcaa gatctggatg gatgagaata tcaagaagca 720 aaatcatacg aaccatgtta tgttcttcct cgttcgagat agaaggcctt atgggccgag 780 cccgcaagat tttggacaag tgttcaacat gtttgacaat gaacctacta ccgcaactgt 840 gaagaatgat cttagggacc ggtatcaggt gttacgtaaa ttctatgcga ctgttgttgg 900 gggaccctcc gggatgaagg aacaagctct ggttaagagg ttttttagga ttaataatca 960 tgtagtgtat aatcatcagg aacaggccaa gtatgagaat catactgaga atgcgttgtt 1020 attgtatatg gcatgtacac atgcctcaaa tccagtgtac gctacgctga aaatacgcat 1080 ctatttttat gatgcagtga caaattaata aatattaaat tttatttcat gagtctccgt 1140 aacttggagt gtgtttagta atacatcgta cataacatga tcaacagctt gaagtacagt 1200 gttaatggaa ataacgccta tcatatctaa atacttgagc acttgatatc taaatactct 1260 taagaaacga ccagtcggag gccgtaaggt cgtccagacc ttgaagttga gaaaacattt 1320 gtgaatcccc aatgttttcc ggaggttgta gttgaaccgt atctggagtg tgatgatgtc 1380 gtggttcatg ttccctggcc tctcgtcgtg gttggtgatt tcgaaataga ggggatttgt 1440 tatttcccag gtaaaaacgc cattctttgc ttgaggcgca gtgatgagtt cccctgtgcg 1500 agaatccatg attgatgcag tcgatatgga gatagaacga gcagccgcat tcgaggtcta 1560 cgcgcctacg tctgagtgcc ctagtcttcg ctgtgcggtg ttggactttg atgggcacta 1620 gagaacaatg gctcgtggag ggtgacgaag gtggcattct ttaaagccca ggctttaagg 1680 gactggttct tttcttcttc cagaaactct ttatatgatg atgttggtcc tggattgcag 1740 aggaagatag tgggaatgcc gcctttaatt tgaattggct tcccgtactt cgtattgctt 1800 tgccaatccc tttgggcccc catgaactct ttgaaatgct ttagataatg cgggtctacg 1860 tcgtcaatga cgttgtacca tgcgtcgttt gaatatacct ttggagacag atccaggtgt 1920 ccacatagat aattatgggg tcccagtgaa cgagcccaca tggttttccc tgttcggcta 1980 tcaccttcta gaacaatact gatcggtctc catggccgcg cagcgggact gcatatattt 2040 tctgataccc atacttcgac gtcgtctggg acgtctgtaa atgatgagga taagaacgga 2100 ctaacgtaag tttgtggcgg agcctggaag attctatctg cgttagcaga tatgttatgg 2160 aactgtaaaa aaaaggactt tggatccttt tccttaataa tctgaagagc ttctgattta 2220 gaagaagcat tcaatgcgtc tgcatatacc tgagctaaat gctggccctc tccccgtgca 2280 cttctggcat cgatctggaa aattccatcg tcaagaaatt ccccgccctt ttcaatgtaa 2340 gctttgacat cggacgagga cttagctccc tgaatgttcg gatggaaatg tgttgatcgg 2400 gatggggaaa tgagatcgaa gaatcgctgg tttgtacatt ggaacttgcc ttcgaattgg 2460 atgagaacat ggatatgagg caccccatcc tgatgtagtt ctctgcaaac cctaatgaat 2520 ttgatatgcg tcgggtaaga aagggttttt aattgggaaa ggacctcttc tttcgttaat 2580 gagcatcggg gataggtgat gaaataattt ttggcattga tttgaaaacg acctactctg 2640 ggcatatttg ctgtcgtttg gaatcggtgg acactcaaag tctgtggcaa tcggtggaac 2700 ggggggcaat ttatatgatg tcccccaatg gcatatgtgt aaataggtcg acttccattt 2760 gaaatttaaa tgtcgaatat tggcggccat ccgattaata tt 2802 //