ID JF909144; SV 1; circular; genomic DNA; STD; VRL; 2797 BP. XX AC JF909144; XX DT 21-JUN-2012 (Rel. 113, Created) DT 05-DEC-2012 (Rel. 115, Last updated, Version 3) XX DE East African cassava mosaic Kenya virus isolate Comoros:Moheli:MO18AP2:2009 DE segment DNA-A, complete sequence. XX KW . XX OS East African cassava mosaic Kenya virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2797 RX DOI; 10.1186/1471-2148-12-228. RX PUBMED; 23186303. RA De Bruyn A., Villemot J., Lefeuvre P., Villar E., Hoareau M., RA Harimalala M., Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B., RA Harkins G.W., Varsani A., Martin D.P., Lett J.M.; RT "East African cassava mosaic-like viruses from Africa to Indian ocean RT islands: molecular diversity, evolutionary history and geographical RT dissemination of a bipartite begomovirus"; RL BMC Evol. Biol. 12(1):228-228(2012). XX RN [2] RP 1-2797 RA Villemot J., Lefeuvre P., Villar E., Hoareau M., Harimalala M., RA Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B., Varsani A., Martin D.P., RA Lett J.-M.; RT ; RL Submitted (24-MAR-2011) to the INSDC. RL UMR PVBMT, CIRAD, 7, chemin de l'IRAT, Saint-Pierre, Reunion 97410, France XX DR MD5; e73bdfd9db3951fb8e515458a6a6a5cb. XX FH Key Location/Qualifiers FH FT source 1..2797 FT /organism="East African cassava mosaic Kenya virus" FT /segment="DNA-A" FT /host="Manihot esculenta (cassava)" FT /isolate="Comoros:Moheli:MO18AP2:2009" FT /mol_type="genomic DNA" FT /country="Comoros:Moheli" FT /lat_lon="12.29 S 43.76 E" FT /collection_date="2009" FT /db_xref="taxon:393599" FT gene 173..502 FT /gene="AV2" FT CDS 173..502 FT /codon_start=1 FT /gene="AV2" FT /product="movement protein" FT /db_xref="GOA:I6LYE7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:I6LYE7" FT /protein_id="AEG90198.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDV" FT gene 333..1106 FT /gene="AV1" FT CDS 333..1106 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:I6LYC2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:I6LYC2" FT /protein_id="AEG90197.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGTVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGQSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT gene complement(1103..1507) FT /gene="AC3" FT CDS complement(1103..1507) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:I6LYE4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:I6LYE4" FT /protein_id="AEG90201.1" FT /translation="MDSRTGELITAPQAKNGVFTWEITNPLYFDITNHDRRPGNMNHDI FT ITFQIRFNHNIRKALGIHKCFLNFKVWTTLRPPTGLFLKVFRYQVLKYLDMIGVISINT FT VIQAVDHVLYHVLLNTLQVTEHHAIKFNLY" FT gene complement(1248..1655) FT /gene="AC2" FT CDS complement(1248..1655) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:I6LYF5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:I6LYF5" FT /protein_id="AEG90200.1" FT /translation="MPPSSPSTSHCSQVPIKVQHRTAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGNNKSPLFRHHQPRQETREHEPRHHHIPDTVQPQ FT HPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT gene complement(1579..2643) FT /gene="AC1" FT CDS complement(1579..2643) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:I6LYE8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I6LYE8" FT /protein_id="AEG90199.1" FT /translation="MPRAGRFSIKAKNYFLTYPKCSLSKEEALNQLRQLQTPTNKLFIK FT ICRELHENGEPHLHALIQFEGKYNCTNQRFFDLISPSRSAHFHPNIQGAKSSSDVKSYL FT DKDGDTIQWGEFQIDGRSARGGQQSANDAYAKALNSANKSEALNVIRELAPKDFVLQFH FT NLNSNLERIFQEPLTPYISPFLSSSFTNVPEELEAWVSENVMGSAARPWRPSSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNQSLKAWALKNATFITLHEPL FT FSSAHQSPTPHSED" FT gene complement(2196..2492) FT /gene="AC4" FT CDS complement(2196..2492) FT /codon_start=1 FT /gene="AC4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:I6LYF1" FT /protein_id="AEG90202.1" FT /translation="MKMGNLICMPSFNSKASTIVPTNDSSTSYPLPGPPISTQIFRELN FT QAPTSSPIWIRTETPSNGASFRSTDDLLEADNNPPMTLTPRLLTQQISQRLLM" XX SQ Sequence 2797 BP; 724 A; 556 C; 724 G; 793 T; 0 other; accggatggc cgcgcccgaa aaaacaggtg gtccccacaa gatggccgcg cccgttaaag 60 aaagtggtcc ccgcgcactt gtgttggtcg gccagtcata tgcacgcgtg aaagtctaga 120 tatttgttgt ttgtctttat agacttcgtc gcgaagtaga gagcgcgtca acatgtggga 180 tccattgttg aacgattttc ccgaaaccgt tcacggtttc cgttctatgc ttgctgttaa 240 atacctgtta catctggaac aggaatacga tcgcggtact gtcggggcgg agtatatacg 300 tgatttaata ggcgttctac ggtgtaagag ttatgtcgaa gcgaccagga gatataataa 360 tctcaacacc cgtatccaag gtgcggagga ggctgaactt cgacagccca tacacgaacc 420 gtgttgttgc ccccactgtc cgcgtcacca gaagcaaaat atgggccaac aggcccatgt 480 atcggaagcc caagatgtat agaatgtatc gaagcccaga tgttcctaag ggctgtgaag 540 gcccatgtaa ggttcagtcc tatgaacaga gggatgatgt gaagcacaca ggtacggtcc 600 gatgtgtcag tgatgttact cgtggatcag gcattaccca tagagtcggg aagaggtttt 660 gtgttaagtc catatatata ttgggcaaga tttggatgga tgagaatatc aagaagcaaa 720 atcatacgaa ccatgttatg ttcttccttg ttcgagatag aaggccttat ggtcagagtc 780 ctcaagattt tggacaagtg ttcaacatgt ttgataatga acctactacg gcaactgtga 840 agaatgatct tagggaccga tatcaggtgt tacgtaaatt ctatgctact gttgttggtg 900 gaccctctgg gatgaaggaa caagctctgg ttaagaggtt ttttaggatc aataatcatg 960 tagtgtataa tcatcaggaa caggccaagt atgagaatca tactgagaat gcgttgttat 1020 tgtatatggc atgtacacat gcctcgaatc ctgtgtacgc tacgctgaaa atacgcatct 1080 atttctatga tgcagtgaca aattaataaa ggttgaattt tattgcatgg tgctccgtaa 1140 cttggagtgt gtttagtaat acatggtaca ggacatgatc aacagcttga attacagtgt 1200 taatggaaat aacgcctatc atatctaaat acttgagcac ttgatatcta aatactttta 1260 agaaaagacc agtcggaggc cgtaaggtcg tccagacctt gaagttgaga aaacacttgt 1320 gaatccccaa tgccttccgg atgttgtggt tgaaccgtat ctggaatgtg atgatgtcgt 1380 ggttcatgtt ccctggtctc ctgtcgtggt tggtgatgtc gaaatagagg ggatttgtta 1440 tttcccaggt aaaaacgcca ttctttgctt gaggcgcagt gatgagttcc cctgtgcgag 1500 aatccatgat tgatgcagtc gatatggaga tagaacgagc agccgcattc gaggtctacc 1560 cgcctacgtc tgacggccct agtcttcgct gtgcggtgtt ggactttgat gggcacttga 1620 gaacaatggc tcgtggaggg tgatgaaggt ggcattcttt aaagcccagg ctttaaggga 1680 ctggttcttt tcctcgtcca gaaactcttt atatgatgat gttggtcctg gattgcatag 1740 gaagatagtg ggaatgccgc ctttaatttg aattggcttc ccgtattttg tattgctttg 1800 ccagtccctt tgggccccca tgaattcttt gaaatgcttg aggtagtggg ggtcgacgtc 1860 atcaatgacg ttgtaccatg cgtcgttgct gtataccttt ggactgagat ccaggtgtcc 1920 acacaagtag ttatgtggtc ccaaagagcg agcccacatt gtctttcctg tcctactatc 1980 tccctcgatt acgatactac taggtctcca tggccgcgca gcggaaccca tcacgttctc 2040 ggaaacccag gcttcaagtt cctcaggaac gttagtgaaa gaagaagaaa gaaagggaga 2100 aatataagga gtgagaggct cttgaaaaat cctctctaaa ttgctattta aattatgaaa 2160 ctgtaaaaca aaatcttttg gggctagttc ccgtattaca ttaagagcct ctgacttatt 2220 tgctgagtta agagccttgg cgtaagcgtc attggcggat tgttgtccgc ctcgagcaga 2280 tcgtccgtcg atctgaaact cgccccattg gatggtgtct ccgtccttat ccagatagga 2340 cttgacgtcg gagcttgatt tagctccctg aatatttggg tggaaatggg cggaccggga 2400 aggggatatg aggtcgaaga atcgttggtt ggtacaattg tacttgcctt cgaattgaat 2460 gagggcatgc agatgaggtt ccccattttc atggagctct ctgcagatct tgatgaacaa 2520 tttattggtt ggggtttgga gttgtcggag ctgattcaag gcctcttctt tcgatagaga 2580 acatttggga tatgtgagga aatagttttt ggctttgatg ctaaaacgac cagcccttgg 2640 cattcgcgct gtcgtatagc aatcgggggg cactcaaagt ctgtagcaat cgggggaatg 2700 ggggggcaat ttatatgatg ccccccaaat ggcatttatg taatatcctc atgaaatttg 2760 aatttcaaac gtggaaagcg gccatccgta taatatt 2797 //