ID JF909132; SV 1; circular; genomic DNA; STD; VRL; 2799 BP. XX AC JF909132; XX DT 21-JUN-2012 (Rel. 113, Created) DT 05-DEC-2012 (Rel. 115, Last updated, Version 3) XX DE East African cassava mosaic Kenya virus isolate Comoros:Moheli:MO09BI3:2009 DE segment DNA-A, complete sequence. XX KW . XX OS East African cassava mosaic Kenya virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2799 RX DOI; 10.1186/1471-2148-12-228. RX PUBMED; 23186303. RA De Bruyn A., Villemot J., Lefeuvre P., Villar E., Hoareau M., RA Harimalala M., Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B., RA Harkins G.W., Varsani A., Martin D.P., Lett J.M.; RT "East African cassava mosaic-like viruses from Africa to Indian ocean RT islands: molecular diversity, evolutionary history and geographical RT dissemination of a bipartite begomovirus"; RL BMC Evol. Biol. 12(1):228-228(2012). XX RN [2] RP 1-2799 RA Villemot J., Lefeuvre P., Villar E., Hoareau M., Harimalala M., RA Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B., Varsani A., Martin D.P., RA Lett J.-M.; RT ; RL Submitted (24-MAR-2011) to the INSDC. RL UMR PVBMT, CIRAD, 7, chemin de l'IRAT, Saint-Pierre, Reunion 97410, France XX DR MD5; c75d6bbaafdddca63e16220319d4fa0e. XX FH Key Location/Qualifiers FH FT source 1..2799 FT /organism="East African cassava mosaic Kenya virus" FT /segment="DNA-A" FT /host="Manihot esculenta (cassava)" FT /isolate="Comoros:Moheli:MO09BI3:2009" FT /mol_type="genomic DNA" FT /country="Comoros:Moheli" FT /lat_lon="12.27 S 43.73 E" FT /collection_date="2009" FT /db_xref="taxon:393599" FT gene 175..531 FT /gene="AV2" FT CDS 175..531 FT /codon_start=1 FT /gene="AV2" FT /product="movement protein" FT /db_xref="GOA:I6LY69" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:I6LY69" FT /protein_id="AEG90126.1" FT /translation="MWDPLLNDFPETLHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCS" FT gene 335..1108 FT /gene="AV1" FT CDS 335..1108 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:I6LYC2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:I6LYC2" FT /protein_id="AEG90125.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGTVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGQSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT gene complement(1105..1509) FT /gene="AC3" FT CDS complement(1105..1509) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:I6LY72" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:I6LY72" FT /protein_id="AEG90129.1" FT /translation="MDSRTGELITAPQAKNGVFTWEITNPLYFDITTHDRRPGNMNHDI FT ITFQIRFNHNIRKALGIHKCFLNFKVWTTLRPPTGLFLKVFRYQVLKYLDMIGVISINT FT VIQAVDHVLYNVLLNTLQVTEHHAIKFNLY" FT gene complement(1250..1657) FT /gene="AC2" FT CDS complement(1250..1657) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:I6LY71" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:I6LY71" FT /protein_id="AEG90128.1" FT /translation="MPPSSPSTSHCSQVPIKVQHRTAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGNNKSPLFRHHHPRQETREHEPRHHHIPDTVQPQ FT HPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT gene complement(1581..2645) FT /gene="AC1" FT CDS complement(1581..2645) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:I6LY70" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I6LY70" FT /protein_id="AEG90127.1" FT /translation="MPRAGRFSIKAKNYFLTYPKCSLSKEEALNQLRQLQTPTNKLFIK FT ICRELHENGEPHLHALIQFEGKYNCTNQRFFDLISPSRSAHFHPNIQGAKSSSDVNSYL FT DKDGDTVQWGEFQIDGRSARGGQQSANDAYAKALNSANKSEALNVIRELAPKDFVLQFH FT NLNSNLERIFQEPLSPYISPFLSSSFTNVPDELEAWVSENVMGSAARPWRPSSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNQSLKAWALKNATFITLHEPL FT FSSAHQSPTPHSED" FT gene complement(2198..2494) FT /gene="AC4" FT CDS complement(2198..2494) FT /codon_start=1 FT /gene="AC4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:I6LY73" FT /protein_id="AEG90130.1" FT /translation="MKMGNLICMPSFSSKASTIVPTNDSSTSYPLPGQPISTQIFRALN FT QAPTSIPIWIRTETPSNGASFRSTDDLLEADNNPPMTLTPRLLTQQISQRLLM" XX SQ Sequence 2799 BP; 726 A; 560 C; 727 G; 786 T; 0 other; accggatggc cgcgcccgaa aaatgcaggt ggaccccaca agatggccgc gcccgttaaa 60 gaaagtggtc cccgcgcact tgtgctggtc ggccagtcat attcacgcgt gaaagtctag 120 atatttgttg tttgtcttta tagacttcgt cgcgaagtag atgagcgcgt caacatgtgg 180 gatccattgt tgaacgattt tcccgaaacc cttcacggtt tccgttctat gcttgctgtt 240 aaatacctgt tacatctgga acaggaatac gatcgcggta ctgtcggggc ggagtatata 300 cgtgatttaa taggggtgct acggtgtaag agttatgtcg aagcgaccag gagatataat 360 aatctcaaca cccgtatcca aggtgcggag gaggctgaac ttcgacagcc catacacgaa 420 ccgtgttgtt gcccccactg tccgcgtcac cagaagcaaa atatgggcca acaggcccat 480 gtatcggaag cccaagatgt acagaatgta tcgaagccca gatgttccta agggctgtga 540 aggcccatgt aaggttcagt cctatgaaca gagggatgat gtgaagcaca ctggtacggt 600 ccgatgtgtc agtgatgtta ctcgtggatc aggcattacc catagagtcg ggaagaggtt 660 ttgtgtgaag tccatatata tattgggcaa gatttggatg gatgagaata tcaagaagca 720 aaatcatacg aaccatgtga tgttcttcct tgttcgagat agaaggccgt atggtcagag 780 tcctcaagat tttggacaag tgttcaacat gttcgataat gaacctacta cggcaactgt 840 gaagaatgat cttagggacc gatatcaggt gttacgtaaa ttctatgcga ctgttgttgg 900 tggaccctct gggatgaagg aacaagctct ggttaagagg ttttttagga tcaataatca 960 tgtagtgtat aatcatcagg aacaggccaa gtatgagaat catactgaga atgcgttgtt 1020 attgtatatg gcatgtacac atgcctcgaa tcctgtgtac gctacgctga aaatacgcat 1080 ctatttctat gatgcagtga caaattaata aaggttgaat tttattgcat ggtgctccgt 1140 aacttggagt gtgtttagta atacattgta cagaacatga tcaacagctt gaattacagt 1200 gttaatggaa ataacgccta tcatatctaa atacttgagc acttgatatc taaatacttt 1260 taagaaaaga ccagtcggag gccgtaaggt cgtccagacc ttgaagttga gaaaacactt 1320 gtgaatcccc aatgccttcc ggatgttgtg gttgaaccgt atctggaatg tgatgatgtc 1380 gtggttcatg ttccctggtc tcctgtcgtg ggtggtgatg tcgaaataga ggggatttgt 1440 tatttcccag gtaaaaacgc cattctttgc ttgaggcgca gtgatgagtt cccctgtgcg 1500 agaatccatg attgatgcag tcgatatgga gatagaacga gcagccgcat tcgaggtcta 1560 cccgcctacg tctgacggcc ctagtcttcg ctgtgcggtg ttggactttg atgggcactt 1620 gagaacaatg gctcgtggag ggtgatgaag gtggcattct ttaaagccca ggctttaagg 1680 gactggttct tttcctcgtc cagaaactct ttatatgatg atgttggtcc tggattgcat 1740 aggaagatag tgggaatgcc gcctttaatt tgaattggct tcccgtattt tgtattgctt 1800 tgccagtccc tttgggcccc catgaattct ttgaaatgct tgaggtagtg ggggtcgacg 1860 tcatcaatga cgttgtacca tgcgtcgttg ctgtatacct ttggactgag atccaggtgt 1920 ccacataagt agttatgtgg tcccaaagag cgagcccaca ttgtcttccc tgtcctacta 1980 tctccctcga ttacgatact actaggtctc catggccgcg cagcggaacc catcacgttc 2040 tcggaaaccc aggcttcaag ttcatcagga acgttagtga aagaagaaga aagaaaggga 2100 gaaatataag gactgagagg ctcttgaaaa atcctctcta aattgctatt taaattatga 2160 aactgtaaaa caaaatcttt tggggctagt tcccgtatta cattaagagc ctctgactta 2220 tttgctgagt taagagcctt ggcgtaagcg tcattggcgg attgttgtcc gcctcgagca 2280 gatcgtccgt cgatctgaaa ctcgccccat tggacggtgt ctccgtcctt atccagatag 2340 gaattgacgt cggagcttga tttagcgccc tgaatatttg ggtggaaatg ggctgaccgg 2400 gaaggggata tgaggtcgaa gaatcgttgg ttggtacaat tgtacttgcc ttcgaactga 2460 atgagggcat gcagatgagg ttccccattt tcatggagct ctctgcagat cttgatgaac 2520 aatttattgg ttggggtttg gagttgtcgg agctgattca aggcctcttc tttcgataga 2580 gaacatttgg gatatgtgag gaaatagttt ttggctttga tgctaaaacg accagccctt 2640 ggcatttgcg ctgtcgtata gcaatcgggg ggcactcaaa gtctgtagca atcgggggaa 2700 tgggggggca atttatatga tgccccccaa atggcattta tgtaatatcc tcatgaaatt 2760 ggaatttcaa acgcgtaaag cggccatccg tataatatt 2799 //