ID JF909077; SV 1; circular; genomic DNA; STD; VRL; 2765 BP. XX AC JF909077; XX DT 21-JUN-2012 (Rel. 113, Created) DT 05-DEC-2012 (Rel. 115, Last updated, Version 3) XX DE East African cassava mosaic virus-Kenya isolate DE Comoros:Anjouan:AJ32BT2:2009 segment DNA-A, complete sequence. XX KW . XX OS East African cassava mosaic virus-Kenya OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2765 RX DOI; 10.1186/1471-2148-12-228. RX PUBMED; 23186303. RA De Bruyn A., Villemot J., Lefeuvre P., Villar E., Hoareau M., RA Harimalala M., Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B., RA Harkins G.W., Varsani A., Martin D.P., Lett J.M.; RT "East African cassava mosaic-like viruses from Africa to Indian ocean RT islands: molecular diversity, evolutionary history and geographical RT dissemination of a bipartite begomovirus"; RL BMC Evol. Biol. 12(1):228-228(2012). XX RN [2] RP 1-2765 RA Villemot J., Lefeuvre P., Villar E., Hoareau M., Harimalala M., RA Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B., Varsani A., Martin D.P., RA Lett J.-M.; RT ; RL Submitted (24-MAR-2011) to the INSDC. RL UMR PVBMT, CIRAD, 7, chemin de l'IRAT, Saint-Pierre, Reunion 97410, France XX DR MD5; 35ebcccb8ab7fddd94953ad218a4218a. XX FH Key Location/Qualifiers FH FT source 1..2765 FT /organism="East African cassava mosaic virus-Kenya" FT /segment="DNA-A" FT /host="Manihot esculenta (cassava)" FT /isolate="Comoros:Anjouan:AJ32BT2:2009" FT /mol_type="genomic DNA" FT /country="Comoros:Anjouan" FT /lat_lon="12.2 S 44.51 E" FT /collection_date="2009" FT /db_xref="taxon:1229189" FT gene 138..494 FT /gene="AV2" FT CDS 138..494 FT /codon_start=1 FT /gene="AV2" FT /product="movement protein" FT /db_xref="GOA:I6LZ01" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:I6LZ01" FT /protein_id="AEG89796.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAEAVQNVSKPRCP" FT gene 298..1071 FT /gene="AV1" FT CDS 298..1071 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:I6LZ78" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:I6LZ78" FT /protein_id="AEG89795.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKLYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHIGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT gene complement(1068..1472) FT /gene="AC3" FT CDS complement(1068..1472) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:I6LX92" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:I6LX92" FT /protein_id="AEG89799.1" FT /translation="MDSRTGELITAPQAKNGVFTWEITNPLYFEITNHDKRPGNMNHDI FT ITLQIRFNHNLRKALAIHKCFLNFKVWTTLRPPTGLFLRVFRSQVLKYLDMIGVISINT FT VIRAVDHVLYAVLLNTLQVTEQHAIKFNLY" FT gene complement(1213..1620) FT /gene="AC2" FT CDS complement(1213..1620) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:I6LX91" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:I6LX91" FT /protein_id="AEG89798.1" FT /translation="MPPSSPSTSHCSQVPIKVQHRTAKNRALRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGNNKSPLFRNHQPRQEAWEHEPRHHHTPDTFQPQ FT PPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT gene complement(1529..2608) FT /gene="AC1" FT CDS complement(1529..2608) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:I6LX90" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I6LX90" FT /protein_id="AEG89797.1" FT /translation="MPRAGRFQINAKNYFITYPRCSLTKEEALSQLQALSYPTNIKFIR FT VCRELYQDGVPHLHVLIQFEGKFQCTNQRFFDLISPSGSTHFHPNIQGAKSSSDVKAYI FT AKGGEFLDDGVFQVDARSARGEGQHLAQVYADALNASSKSEALQIIKEHDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTHVPEDIEVWVSENICSPAARPWRPISIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREFLAEEKNQSLKDWALKNATFVTLHEPL FT FSSAHQSPTPHSEEQGPQT" FT gene complement(2218..2451) FT /gene="AC4" FT CDS complement(2218..2451) FT /codon_start=1 FT /gene="AC4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:I6LX93" FT /protein_id="AEG89800.1" FT /translation="MGCLISMFSSNSKASSNVQTRGSSISFPRPDQHISIQTFRELNHR FT PMSRLTLQREGNFLTMEFSKSMPEVQGGRASI" XX SQ Sequence 2765 BP; 722 A; 551 C; 712 G; 780 T; 0 other; accggatggc cgcgcccgtg aaagatagtg gtccccgcgc acgcgttttg gtcggccaat 60 catatgtacg cgtgaaagtc tagatattcg ttgtttgtct ttatagactt cgtcgcgaag 120 tagtgaagcg cgtcaacatg tgggatccat tgttgaacga tttcccagaa accgtacacg 180 gtttccgttc tatgcttgcg gttaaatacc tgttacatct ggaacaggaa tacgatcgcg 240 gtactgtcgg ggctgagtac atacgggatc taataggggt tctacggtgt aagagttatg 300 tcgaagcgac caggagatat aataatctca acacccgtat ccaaggtgcg gaggaggctg 360 aacttcgaca gcccatacac gaaccgtgtt gttgccccca ctgtccgcgt caccagaagc 420 aaaatatggg ccaacaggcc catgtatcgg aagccgaagc tgtacagaat gtatcgaagc 480 ccagatgtcc ctaagggctg tgaaggccca tgtaaggttc agtcgtatga acagagggat 540 gatgttaagc acattggtat ggtccgatgt gtcagcgatg ttactcgtgg gtcaggcatt 600 acccatagag tcgggaagag attttgtgtg aagtccatat atatattggg caagatctgg 660 atggatgaga atatcaagaa gcaaaatcat acgaaccatg ttatgttctt cctcgttcga 720 gacagaaggc cttatggtcc gagcccgcaa gattttggac aagtgttcaa catgtttgat 780 aatgaaccta ctactgcaac tgtgaagaat gatctgaggg atcggtatca ggtgttacgt 840 aaattctatg cgactgttgt tggtggaccc tccgggatga aggaacaggc gctggttaag 900 aggtttttta ggatcaataa tcatgtagtg tataatcatc aggaacaggc caagtatgag 960 aatcatactg agaatgcgtt gttattgtat atggcatgta cacatgcctc aaatcctgtg 1020 tacgcaactt tgaaaatacg catctatttc tatgatgcag tgacaaatta ataaaggttg 1080 aattttattg catgttgctc cgtaacttgg agtgtgttta gtaatacagc gtacagaaca 1140 tgatcaacag ctctaattac agtgttaatg gaaataacgc ctatcatatc taaatacttg 1200 agcacttgag atctaaatac tcttaagaaa agaccagtcg gaggccgtaa ggtcgtccag 1260 accttgaagt tgagaaaaca cttgtgaatc gccaatgcct tccggaggtt gtggttgaaa 1320 cgtatctgga gtgtgatgat gtcgtggttc atgttcccag gcctcttgtc gtggttggtg 1380 atttcgaaat agaggggatt tgttatttcc caggtaaaaa cgccattctt tgcttgaggc 1440 gcagtgatga gttcccctgt gcgagaatcc atggttgatg cagtcgatat ggagatagaa 1500 cgagcagcca cattcgaggt ctacccgcct acgtctgagg gccctgttct tcgctgtgcg 1560 gtgttggact ttgatgggca cttgagaaca atggctcgtg gagggtgacg aaggtggcat 1620 tctttaaagc ccagtcttta agggactgat tcttttcctc ggccagaaac tctctatatg 1680 atgatgttgg tcctggattg cagaggaaga tagtgggaat gccgccttta atttgtattg 1740 gcttcccgta ctttgtattg ctttgccagt cccgctgggc ccccatgaat tctttgaagt 1800 gctttagata atgcgggtcg acgtcgtcaa tgacgttgta ccatgcgtcg tttgaatata 1860 cttttggaga cagatccagg tgtccacata gataattatg gggtcccagt gaacgagccc 1920 acatggtttt tccggttcgg ctatcacctt cgagaacaat actgatcggt ctccatggcc 1980 gcgcagcggg actgcatata ttttctgata cccatacctc tatgtcttcg gggacgtgtg 2040 taaatgatga tgataagaac ggactaacgt atgtttgtgg cggagcctgg aagattctat 2100 ctgcgttagc agatatgtta tggaactgta aaaaaaagga cttgggatcg tgttctttaa 2160 taatttgaag agcttctgat ttagaagaag cattcaacgc gtctgcatat acctgagcta 2220 aatgctggcc ctcccccctt gcacttctgg catcgacttg gaaaactcca tcgtcaagaa 2280 attcccctcc ctttgcaatg taagccttga catcggacga tgatttagct ccctgaatgt 2340 ttggatggaa atgtgttgat ccggacgggg aaatgagatc gaagaacctc tggtttgtac 2400 attggaactt gccttcgaat tggatgagaa catggagatg aggcacccca tcctgatata 2460 gttctcggca aaccctaatg aatttgatat tcgtcgggta agaaagggct tgtaattggg 2520 aaagggcctc ttccttggtt aatgagcatc ggggataggt gatgaaataa tttttggcat 2580 ttatttgaaa acgaccggct cttggcatat ttgctgtcgt tttggatcgg tggacactca 2640 aaactccagg ggaatggtgg aacggtgggc aatatatatg atgtccccca atggcatatg 2700 tgtaaatagg tcaacctcca ttcaaatttt gaattgcgaa tattggcggc catccgatta 2760 atatt 2765 //