ID JF909065; SV 1; circular; genomic DNA; STD; VRL; 2801 BP. XX AC JF909065; XX DT 21-JUN-2012 (Rel. 113, Created) DT 05-DEC-2012 (Rel. 115, Last updated, Version 3) XX DE East African cassava mosaic virus-Kenya isolate DE Comoros:Anjouan:AJ02B37:2004 segment DNA-A, complete sequence. XX KW . XX OS East African cassava mosaic virus-Kenya OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2801 RX DOI; 10.1186/1471-2148-12-228. RX PUBMED; 23186303. RA De Bruyn A., Villemot J., Lefeuvre P., Villar E., Hoareau M., RA Harimalala M., Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B., RA Harkins G.W., Varsani A., Martin D.P., Lett J.M.; RT "East African cassava mosaic-like viruses from Africa to Indian ocean RT islands: molecular diversity, evolutionary history and geographical RT dissemination of a bipartite begomovirus"; RL BMC Evol. Biol. 12(1):228-228(2012). XX RN [2] RP 1-2801 RA Villemot J., Lefeuvre P., Villar E., Hoareau M., Harimalala M., RA Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B., Varsani A., Martin D.P., RA Lett J.-M.; RT ; RL Submitted (24-MAR-2011) to the INSDC. RL UMR PVBMT, CIRAD, 7, chemin de l'IRAT, Saint-Pierre, Reunion 97410, France XX DR MD5; dd024d66ce92aa021ccb77e958e7f397. XX FH Key Location/Qualifiers FH FT source 1..2801 FT /organism="East African cassava mosaic virus-Kenya" FT /segment="DNA-A" FT /host="Manihot esculenta (cassava)" FT /isolate="Comoros:Anjouan:AJ02B37:2004" FT /mol_type="genomic DNA" FT /country="Comoros:Anjouan" FT /lat_lon="12.13 S 44.42 E" FT /collection_date="2004" FT /db_xref="taxon:1229189" FT gene 174..530 FT /gene="AV2" FT CDS 174..530 FT /codon_start=1 FT /gene="AV2" FT /product="movement protein" FT /db_xref="GOA:I6LZ01" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:I6LZ01" FT /protein_id="AEG89724.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAEAVQNVSKPRCP" FT gene 334..1107 FT /gene="AV1" FT CDS 334..1107 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:I6LZ78" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:I6LZ78" FT /protein_id="AEG89723.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKLYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHIGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT gene complement(1104..1508) FT /gene="AC3" FT CDS complement(1104..1508) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:I6LX26" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:I6LX26" FT /protein_id="AEG89727.1" FT /translation="MDSRTGELITAPQAKNGVFTWAITNPLYFEITNHDKRPGNMNHDI FT ITLQIRFNHNLRKALAIHKCFLNFKVWTTLRPQTGLFLKVFRYQVLKYLDMIGVISINT FT VIRAVDHVLYAVLLNTLQVTEHHAIKFNLY" FT gene complement(1249..1656) FT /gene="AC2" FT CDS complement(1249..1656) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:I6LX25" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:I6LX25" FT /protein_id="AEG89726.1" FT /translation="MPPSSPSTSHCSQVPIKVQHRTAKNRALRRRRVDLACGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGNNKSPLFRNHQPRQEAREHEPRHHHTPDTFQPQ FT PPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT gene complement(1565..2644) FT /gene="AC1" FT CDS complement(1565..2644) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:I6LX18" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I6LX18" FT /protein_id="AEG89725.1" FT /translation="MPRAGRFQVNAKNYFITYPRCSLSKEEALSQLKALSYPTNIKFIR FT VCRELHQDGVPHLHVLIQFEGKFQCTNPRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI FT EKGGEFLDDGIFQVDARSARGEGQHLAQVYADALNASSKSEALQIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTHVPEDIEVWVSENICSPAARPWRPISIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLEEDKNQSLKAWALKNATFVTLHEPL FT FSSTHQSPTPHSEEQGPQT" FT gene complement(2254..2487) FT /gene="AC4" FT CDS complement(2254..2487) FT /codon_start=1 FT /gene="AC4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:I6LX21" FT /protein_id="AEG89728.1" FT /translation="MGCLISMFSSNSKASSNVQTRDSSISFPRPDQHISIQTFRELNHR FT PMSKLTLKREGNFLTMAFSRSMPEVQGERASI" XX SQ Sequence 2801 BP; 734 A; 556 C; 719 G; 792 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gaccccacca gatggctacg cccgtgaaag 60 atagtggtcc ccgcgcactc gtttcggtcg gccagtcata tttacgcgtg aaagtctaga 120 tatttgttgt ttgtctttat agacttcgtc gcgaagtagt taagcgcgtc aacatgtggg 180 atccattgtt gaacgatttc ccagaaaccg tgcacggttt ccgttctatg cttgctgtta 240 aatacctgtt acatctggaa caggaatacg atcgcggtac tgtcggggct gagtacatac 300 gggatctaat aggggttcta cggtgtaaga gttatgtcga agcgaccagg agatataata 360 atctcaacac ccgtatccaa ggtgcggagg aggctgaact tcgacagccc atacacgaac 420 cgtgttgttg cccccactgt ccgcgtcacc agaagcaaaa tatgggccaa caggcccatg 480 tatcggaagc cgaagctgta cagaatgtat cgaagcccag atgtccctaa gggctgtgaa 540 ggcccatgta aggttcagtc gtatgaacag agggatgatg ttaagcacat tggtatggtc 600 cgatgtgtca gtgatgttac tcgtgggtca ggcattaccc atagagtcgg gaagaggttt 660 tgtgtgaagt ccatatatat attgggcaag atctggatgg atgagaatat taagaagcaa 720 aatcatacga accatgttat gttcttcctc gttcgagaca gaaggcctta tgggccgagc 780 ccgcaagatt ttggacaagt gttcaacatg tttgataatg aacctactac tgcaactgtg 840 aagaatgatc tgagggaccg gtatcaggtg ttacgtaaat tctatgcgac tgttgttggt 900 ggaccctccg ggatgaagga acaagcgctg gttaagaggt tttttaggat caataatcat 960 gtagtgtata atcatcagga acaggccaag tatgagaatc atactgagaa tgcgttgtta 1020 ttgtatatgg catgtacaca tgcctcaaat cctgtgtacg ctacgttgaa aatacgcatc 1080 tatttctatg atgcagtaac aaattaataa aggttgaatt ttattgcatg gtgctccgta 1140 acttggagtg tgtttagtaa tacagcgtac agaacatgat caacagctct aattacagtg 1200 ttaatggaaa taacgcctat catatctaaa tacttgagca cttgatatct aaatactttt 1260 aagaaaagac cagtctgagg ccgtaaggtc gtccagacct tgaagttgag aaaacacttg 1320 tgaatcgcca atgccttccg gaggttgtgg ttgaaacgta tctggagtgt gatgatgtcg 1380 tggttcatgt tccctggcct cttgtcgtgg ttggtgattt cgaaatagag gggatttgtt 1440 attgcccagg taaaaacgcc attctttgct tgaggcgcag tgatgagttc ccctgtgcga 1500 gaatccatgg ttgatgcagt cgatatggag atagaacgag cagccacatg cgaggtctac 1560 ccgcctacgt ctgagggccc tgttcttcgc tgtgcggtgt tggactttga tgggtacttg 1620 agaacaatgg ctcgtggagg gtgacgaagg tggcattctt taaagcccag gctttaaggg 1680 actgattctt gtcctcctcc agaaactctt tatatgatga tgttggtcct ggattgcaga 1740 ggaagatagt gggaatgccg cctttaattt gaattggctt cccgtacttt gtattgcttt 1800 gccagtccct ttgggccccc atgaattctt tgaagtgctt tagataatgc gggtctacgt 1860 cgtcaatgac gttgtaccat gcgtcgtttg aatatacctt tggagacaga tccaggtgtc 1920 cacatagata attatggggt cccagtgaac gagcccacat ggtttttccg gttcggctat 1980 caccttcgag aacaatactg atcggtctcc atggccgcgc agcgggactg catatatttt 2040 ctgataccca tacctctatg tcttcgggga cgtgtgtaaa tgatgatgat aagaacggac 2100 taacgtaagt ttgtggcgga gcctggaaga ttctatctgc gttagcagat atgttatgga 2160 actgtaaaaa aaatgacttg ggatcttttt ctttaataat ttgaagagct tcggatttag 2220 aagaagcatt caacgcgtct gcatatacct gagctaaatg ctggccctct ccccttgcac 2280 ttctggcatc gacctggaaa atgccatcgt caagaaattc ccctcccttt tcaatgtaag 2340 ctttgacatc ggacgatgat ttagctccct gaatgtttgg atggaaatgt gttgatctgg 2400 acggggaaat gagatcgaag aatcgcgggt ttgtacattg gaacttgcct tcgaattgga 2460 tgagaacatg gagatgaggc accccatcct gatgaagttc tctgcaaacc ctaatgaatt 2520 tgatatttgt cgggtaagaa agggctttta attgggaaag ggcctcttcc ttggataatg 2580 agcatcgggg ataggtgatg aaataatttt tggcatttac ttgaaaacga ccggctcttg 2640 gcatatttgc tgtcgttttg gatcggtgga cactcaaaac tccaggggaa tggtggaacg 2700 gtgggcatta tatatgatgt cccccaatgg caaatgtgta aataggtcaa cctccattca 2760 aaatttgaat tgcgaatatt ggcggccatc cgattaatat t 2801 //