ID   JF833432; SV 1; linear; genomic RNA; STD; VRL; 1342 BP.
XX
AC   JF833432;
XX
DT   14-NOV-2011 (Rel. 110, Created)
DT   14-NOV-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Cowpea aphid-borne mosaic virus isolate TC1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Cowpea aphid-borne mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1342
RA   Nicolini C., Rabelo Filho F.A.C., Resende R.O., Andrade G.P.,
RA   Kitajima E.W., Pio-Ribeiro G., Nagata T.;
RT   "Possible host adaptation as an evolution factor of Cowpea aphid-borne
RT   mosaic virus deduced by coat protein gene analysis";
RL   Unpublished.
XX
RN   [2]
RP   1-1342
RA   Nicolini C., Rabelo Filho F.A.C., Resende R.O., Andrade G.P.,
RA   Kitajima E.W., Pio-Ribeiro G., Nagata T.;
RT   ;
RL   Submitted (25-APR-2011) to the INSDC.
RL   Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Av.
RL   Dom Manoel de Medeiros, s/n, Dois Irmaos, Recife, Pernambuco 52171-030,
RL   Brazil
XX
DR   MD5; d52c9e80ec537745c739d5df8ba3e81a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1342
FT                   /organism="Cowpea aphid-borne mosaic virus"
FT                   /host="Cassia hoffmannseggii"
FT                   /isolate="TC1"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /collection_date="2010"
FT                   /note="acronym: CABMV"
FT                   /db_xref="taxon:12199"
FT   CDS             <1..1266
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:G8EFM9"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:G8EFM9"
FT                   /protein_id="AET21583.1"
FT                   /translation="SFKELGLNYDFSERTRKREELWFMSHQAKLVGDLYIPKLEQERIV
FT                   SILEWDRSKEMLHRTEAVCAAMIEAWGYPELLQEIRKYYLWLLQRDEFKELVNLGKAPY
FT                   IAETALKKLYTDERASEKELQRYLQDILSFYDDCELEDVVLQSDERQKEMDAGKDKDKA
FT                   KEARELSMQQKQVRSKEAKETERDVSTSSSGQLVPRLQKISKKMNMPMVAGRVLLNLDH
FT                   LIEYKPAQIDLYNTRASKTQLSKWFEAIKEEYELDDDKMGVIMNGFMVWCIENGTSPDV
FT                   NGVWTMMDGDEQVEFPLKPIVENAKPTLRQIMHHFSDAAEAYIEMRNSEGFYMPRYGLL
FT                   RNLRDKSLARYAFDFYEVTSKTSERAREAIAQMKAAALANVNTRMFGLDGNVATTSENT
FT                   ERHTATDVNQNMHSLLGMTHGQ"
FT   mat_peptide     439..1263
FT                   /product="coat protein"
XX
SQ   Sequence 1342 BP; 452 A; 239 C; 331 G; 320 T; 0 other;
     tccttcaaag aattgggttt gaactatgac ttttcagaga ggacaagaaa aagagaagag        60
     ttatggttca tgtcccatca agctaagcta gtgggtgatc tgtacatacc aaagctagag       120
     caagaaagaa tcgtgtcaat tctagagtgg gatcgcagca aggaaatgct gcacagaaca       180
     gaagctgtat gtgcagcaat gattgaggca tggggttacc ccgaactgtt gcaagaaatt       240
     aggaaatact atctctggtt gttacaaaga gatgaattca aagagttggt taatcttgga       300
     aaggccccat atatcgcaga aactgctctc aagaagttat atactgacga acgggcctca       360
     gaaaaggaat tgcagagata tcttcaagat atcctttcct tctatgatga ctgcgaattg       420
     gaagatgttg tgctccagtc cgatgaaagg caaaaagaaa tggatgcagg caaggacaaa       480
     gataaggcta aagaagccag agagctgtca atgcaacaaa agcaagtgag gagcaaagaa       540
     gcaaaggaaa cagagaggga cgtttcaact agttcttcag gacaactagt tccacgtcta       600
     caaaagatta gcaaaaagat gaatatgccc atggttgctg gtagagtact tctcaatttg       660
     gaccatttga tagaatacaa gccagcacag attgatctat ataacaccag agcatcaaag       720
     acacagctta gtaaatggtt tgaggctatc aaagaagaat acgagctgga tgatgacaag       780
     atgggtgtta tcatgaatgg gttcatggtc tggtgcattg aaaatggaac ttcacctgat       840
     gtaaatggag tgtggactat gatggatggg gatgagcaag tggaatttcc actcaaaccc       900
     attgtggaaa atgcaaaacc cacactcaga caaattatgc accatttctc agacgcagct       960
     gaagcgtata ttgagatgag aaattctgaa gggttctaca tgcccaggta cggactgctg      1020
     aggaatttaa gagacaagag cttagcaagg tatgctttcg atttttatga agttacatct      1080
     aagacttctg aaagagcaag ggaagcaata gcacaaatga aggctgcagc tctcgccaac      1140
     gttaacacca ggatgtttgg cctggatgga aatgtggcaa caactagtga aaacactgag      1200
     aggcacactg ccactgatgt taatcagaac atgcattccc tcttagggat gacgcatggg      1260
     cagtaaaggc ttgggttctg ccctcgccac agttatcgtt tcacagtctt agctaatggt      1320
     tggttttagt aaatagtacg ca                                               1342
//