ID   JF833431; SV 1; linear; genomic RNA; STD; VRL; 1360 BP.
XX
AC   JF833431;
XX
DT   14-NOV-2011 (Rel. 110, Created)
DT   14-NOV-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Cowpea aphid-borne mosaic virus isolate LMN2 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Cowpea aphid-borne mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1360
RA   Nicolini C., Rabelo Filho F.A.C., Resende R.O., Andrade G.P.,
RA   Kitajima E.W., Pio-Ribeiro G., Nagata T.;
RT   "Possible host adaptation as an evolution factor of Cowpea aphid-borne
RT   mosaic virus deduced by coat protein gene analysis";
RL   Unpublished.
XX
RN   [2]
RP   1-1360
RA   Nicolini C., Rabelo Filho F.A.C., Resende R.O., Andrade G.P.,
RA   Kitajima E.W., Pio-Ribeiro G., Nagata T.;
RT   ;
RL   Submitted (25-APR-2011) to the INSDC.
RL   Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Av.
RL   Dom Manoel de Medeiros, s/n, Dois Irmaos, Recife, Pernambuco 52171-030,
RL   Brazil
XX
DR   MD5; 0234f8e99eb866aaffe6dda38d48af86.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1360
FT                   /organism="Cowpea aphid-borne mosaic virus"
FT                   /host="Cassia hoffmannseggii"
FT                   /isolate="LMN2"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /collection_date="2009"
FT                   /note="acronym: CABMV"
FT                   /db_xref="taxon:12199"
FT   CDS             <1..1284
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:G8EFM8"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:G8EFM8"
FT                   /protein_id="AET21582.1"
FT                   /translation="LDTFTKSFKELGLNYDFSERTRKREELWFMSHQAKLVGDLYIPKL
FT                   EQERIVSILEWDRSKEMLHRTEAVCAAMIEAWGYPELLQEIRRYYLWLLQRDEFKELVN
FT                   LGKAPYIAETALKKLYTDEQASEKELQRYLQDILSXYDDCELEDVVLQSDERQKEMDAG
FT                   KDKDKAKEAREQSMQQKQARSKEVKETERDVSTSSSGQLVPRLQKISKKMNMPMVAGRV
FT                   LLNLDHLIEYKPAQIDLYNTRASKTQLSKWFEAIKEEYELDDDKMGVIMNGFMVWCIEN
FT                   GTSPDVNGVWTMMDGDEQVEFPLKPIVENAKPTLRQIMHHFSDAAEAYIEMRNSEGFYM
FT                   PRYGLLRNLRDKSLARYAFDFYEVTSKTSERAREAIAQMKAAALANVNTRMFGLDGNVA
FT                   TTSENTERHTATDVNQNMHSLLGMTHGQ"
FT   mat_peptide     457..1281
FT                   /product="coat protein"
XX
SQ   Sequence 1360 BP; 447 A; 244 C; 345 G; 323 T; 1 other;
     ctcgacacat tcacaaagtc cttcaaagaa ttgggtttga actatgattt ttcagaaagg        60
     acaaggaaga gagaagagtt atggttcatg tcccatcaag ctaagttagt gggtgatttg       120
     tacataccaa agctggagca agaaagaatc gtgtcaattc tggagtggga tcgcagcaag       180
     gaaatgctgc acagaacaga agctgtgtgt gcagcaatga tcgaagcatg gggttacccc       240
     gaactgttgc aagagattag gagatactat ctctggttgt tacaaagaga tgaattcaaa       300
     gagttggtta atcttggaaa ggccccgtat atcgcagaaa ctgctctcaa gaagttatat       360
     actgacgaac aggcctcaga aaaggaattg cagaggtatc ttcaagatat cctttctntc       420
     tatgatgact gcgagttgga agatgttgtg cttcagtccg atgaaaggca aaaggaaatg       480
     gatgcaggca aggacaagga taaggctaaa gaagccagag agcagtcaat gcagcaaaag       540
     caagcgagga gcaaagaagt caaggaaaca gagagggacg tttcaactag ctcttcagga       600
     cagctagttc cacgtctaca gaagattagt aaaaagatga atatgcccat ggttgctggt       660
     agagtacttc tcaatttgga ccatttgata gaatacaagc cagcacaaat tgatctatat       720
     aacaccagag catcaaagac acagcttagt aaatggtttg aggctatcaa agaagaatac       780
     gagctggatg atgataagat gggtgttatc atgaatgggt tcatggtctg gtgcattgaa       840
     aatggaactt cacctgatgt aaatggagtg tggactatga tggatgggga tgagcaagtg       900
     gaatttccac tcaaacccat tgtggaaaat gcaaaaccca cactcagaca aattatgcac       960
     cacttctcag acgcagctga agcgtatatt gagatgagaa attctgaagg gttctacatg      1020
     cccaggtacg gactgctgag gaatttaaga gacaagagct tagcaaggta tgctttcgat      1080
     ttctatgaag ttacatctaa gacttctgaa agagcaaggg aagcaatagc acaaatgaag      1140
     gctgcagctc tcgccaacgt taacaccagg atgtttggcc tggatgggaa cgtggcaaca      1200
     actagtgaga acactgagag gcacactgcc actgatgtta atcagaacat gcattccctc      1260
     ttagggatga cgcatgggca gtaaaggctt gggttctgcc ctcgccacag ttatcgtttc      1320
     acaatcttag ctaatggttg gttttagtaa atagtacgca                            1360
//