ID   JF833429; SV 1; linear; genomic RNA; STD; VRL; 1139 BP.
XX
AC   JF833429;
XX
DT   14-NOV-2011 (Rel. 110, Created)
DT   14-NOV-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Cowpea aphid-borne mosaic virus isolate LP1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Cowpea aphid-borne mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1139
RA   Nicolini C., Rabelo Filho F.A.C., Resende R.O., Andrade G.P.,
RA   Kitajima E.W., Pio-Ribeiro G., Nagata T.;
RT   "Possible host adaptation as an evolution factor of Cowpea aphid-borne
RT   mosaic virus deduced by coat protein gene analysis";
RL   Unpublished.
XX
RN   [2]
RP   1-1139
RA   Nicolini C., Rabelo Filho F.A.C., Resende R.O., Andrade G.P.,
RA   Kitajima E.W., Pio-Ribeiro G., Nagata T.;
RT   ;
RL   Submitted (25-APR-2011) to the INSDC.
RL   Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Av.
RL   Dom Manoel de Medeiros, s/n, Dois Irmaos, Recife, Pernambuco 52171-030,
RL   Brazil
XX
DR   MD5; a165bc8dd5b5df13758a56237d531283.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1139
FT                   /organism="Cowpea aphid-borne mosaic virus"
FT                   /host="Cassia hoffmannseggii"
FT                   /isolate="LP1"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /collection_date="2009"
FT                   /note="acronym: CABMV"
FT                   /db_xref="taxon:12199"
FT   CDS             <1..1067
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:G8EFM6"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:G8EFM6"
FT                   /protein_id="AET21580.1"
FT                   /translation="IEAWGYPELLQEIRKYYLWLLQRDEFKELVNLGKAPYIAETALKK
FT                   LYTDEQASEKELQRYLQDILSFYDDCELEDVVLQSDERQKEMDAGKDKDRAKEARELSM
FT                   QQKQVRSKEAKETERDVSTSSSGQLVPRLQKISKKMNMPMVAGRVLLNLDHLIEYKPAQ
FT                   IDLYNTRASKTQLSKWFEAIKEEYELDDDKMGVIMNGFMVWCIENGTSPDVNGVWTMMD
FT                   GDEQVEFPLKPIVENAKPTLRQIMHHFSDAAEAYIEMRNSEGFYMPRYGLLRNLRDKSL
FT                   ARYAFDFYEVTSKTSERAREAIAQMKAAALANVNTRMFGLDGNVATTSENTERHTATDV
FT                   NQNMHSLLGMTHGQ"
FT   mat_peptide     240..1064
FT                   /product="coat protein"
XX
SQ   Sequence 1139 BP; 378 A; 202 C; 282 G; 277 T; 0 other;
     tgattgaggc atggggttac cccgaactgt tgcaagaaat taggaaatac tatctctggt        60
     tgttacaaag agatgaattc aaagagttgg ttaatcttgg aaaggcccca tatatcgcag       120
     aaactgctct caagaagttg tacactgacg aacaggcctc agaaaaggaa ttgcagagat       180
     atcttcaaga tatcctttcc ttctatgatg actgcgaatt ggaagatgtt gtgctccagt       240
     ccgatgaaag gcaaaaggaa atggatgcag gcaaggacaa agatagggct aaagaagcca       300
     gagagctgtc aatgcaacaa aagcaagtga ggagcaaaga agcaaaggaa acagagaggg       360
     acgtttcaac tagttcttca ggacaactag ttccacgtct acaaaagatt agcaaaaaga       420
     tgaatatgcc catggttgct ggtagagtac ttctcaattt ggaccatttg atagagtaca       480
     agccagcaca gattgattta tataacacca gagcatcaaa gacacagctt agtaaatggt       540
     ttgaggctat taaagaagaa tacgagctgg atgatgacaa gatgggtgtt atcatgaatg       600
     ggttcatggt ctggtgcatt gaaaatggaa cttcacctga tgtgaatgga gtgtggacta       660
     tgatggatgg ggatgagcaa gtggaatttc cactcaaacc cattgtggaa aatgcaaaac       720
     ccacactcag acaaattatg catcatttct cagacgcagc tgaagcgtat attgagatga       780
     gaaattctga agggttctac atgcccaggt acggactgct gaggaattta agagacaaga       840
     gcttagcaag gtatgctttc gatttttatg aagttacatc taagacttct gaaagagcaa       900
     gggaagcaat agcacaaatg aaggctgcag ctctcgccaa cgttaacacc aggatgtttg       960
     gcctggatgg aaatgtggca acaactagtg aaaacactga gaggcacact gccactgatg      1020
     ttaatcagaa catgcattcc ctcttaggga tgacgcatgg gcagtaaagg cttgggttct      1080
     gccctcgcca cagttatcgt ttcacaatct tagctaatgg ttggttttag taaatagta       1139
//