ID   JF833423; SV 1; linear; genomic RNA; STD; VRL; 1228 BP.
XX
AC   JF833423;
XX
DT   14-NOV-2011 (Rel. 110, Created)
DT   14-NOV-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Cowpea aphid-borne mosaic virus isolate PPL1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Cowpea aphid-borne mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1228
RA   Nicolini C., Rabelo Filho F.A.C., Resende R.O., Andrade G.P.,
RA   Kitajima E.W., Pio-Ribeiro G., Nagata T.;
RT   "Possible host adaptation as an evolution factor of Cowpea aphid-borne
RT   mosaic virus deduced by coat protein gene analysis";
RL   Unpublished.
XX
RN   [2]
RP   1-1228
RA   Nicolini C., Rabelo Filho F.A.C., Resende R.O., Andrade G.P.,
RA   Kitajima E.W., Pio-Ribeiro G., Nagata T.;
RT   ;
RL   Submitted (25-APR-2011) to the INSDC.
RL   Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Av.
RL   Dom Manoel de Medeiros, s/n, Dois Irmaos, Recife, Pernambuco 52171-030,
RL   Brazil
XX
DR   MD5; 8a9f0dbea5bb13b422b577f2a7a076b7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1228
FT                   /organism="Cowpea aphid-borne mosaic virus"
FT                   /host="Cassia hoffmannseggii"
FT                   /isolate="PPL1"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /collection_date="2009"
FT                   /note="acronym: CABMV"
FT                   /db_xref="taxon:12199"
FT   CDS             <1..1153
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:G8EFM0"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:G8EFM0"
FT                   /protein_id="AET21574.1"
FT                   /translation="LEQERIVSILEWDRSKEMLHRTEAVCAAMIEAWGYPELLQEIRKY
FT                   YLWLLQRDEFKELVNLGKAPYIAETALKKLYTDEQASEKELQRYLQDILSFYDDCELED
FT                   VVLQSDERQKEMDAGKDRDKAKEAREQSMQQRQVRSKEAKETERDVSTSSSGQLVPRLQ
FT                   KISKKMNMPMVAGRVLLNLDHLIEYKPAQIDLYNTRASKTQLSKWFEAIKEEYELDDDK
FT                   MGVIMNGFMVWCIENGTSPDVNGVWTMMDGDEQVEFPLKPIVENAKPTLRQIMHHFSDA
FT                   AEAYIEMRNSEGFYMPRYGLLRNLRDKSLARYAFDFYEVTSKTSERAREAIAQMKAAAL
FT                   ANVNTRMFGLDGNVATTSENTERHTATDVNQNMHSLLGMTHGQ"
FT   mat_peptide     326..1150
FT                   /product="coat protein"
XX
SQ   Sequence 1228 BP; 406 A; 226 C; 311 G; 285 T; 0 other;
     gctagagcaa gaaagaatcg tgtcaattct agagtgggat cgcagcaagg aaatgctgca        60
     cagaacagaa gccgtatgtg cagcaatgat tgaggcatgg ggttaccccg aactgttgca       120
     agaaattagg aaatactatc tctggttgtt acaaagagat gagttcaaag agttggttaa       180
     tcttggaaag gccccgtata tcgcggaaac tgctctcaag aagctatata ctgatgaaca       240
     ggcctcagaa aaggaattgc agagatatct tcaagatatc ctttccttct atgatgactg       300
     tgaattagaa gatgttgtgc tccagtccga tgaaaggcaa aaagaaatgg atgcaggcaa       360
     ggacagagat aaggctaaag aagccagaga gcagtcaatg caacaaaggc aagtgaggag       420
     caaagaagcc aaggaaacag agagggacgt ttcaactagt tcctcaggac aactagttcc       480
     acgtctacaa aagattagca aaaagatgaa tatgcccatg gttgctggta gagtacttct       540
     caatttggac catctgatag aatacaagcc agcacagatt gatctatata acaccagagc       600
     atcaaagaca cagcttagta aatggtttga ggctattaaa gaagaatacg agctggatga       660
     tgacaagatg ggtgttatca tgaatgggtt catggtctgg tgcattgaaa atggaacttc       720
     acctgatgta aatggagtgt ggactatgat ggatggggat gagcaagtgg aatttccgct       780
     caaacccatt gtggaaaatg caaaacccac actcagacaa attatgcacc acttctcaga       840
     cgcagctgaa gcgtatattg agatgagaaa ttctgaaggg ttctacatgc ccaggtacgg       900
     actgctgagg aatttaagag acaagagctt agcaaggtat gcttttgact tctatgaagt       960
     tacatctaag acttctgaaa gagcaaggga agcaatagca caaatgaagg ctgcagctct      1020
     cgccaacgtt aacaccagga tgtttggcct ggatgggaac gtggcaacaa ctagtgagaa      1080
     cactgagagg cacactgcca ctgatgttaa tcagaacatg cattccctct tagggatgac      1140
     gcatgggcag taaaggcttg ggttctgccc tcgccacagt tatcgtttca cagtcttagc      1200
     taatggttgg ttttagtaaa tagtacgc                                         1228
//