ID   JF833420; SV 1; linear; genomic RNA; STD; VRL; 1188 BP.
XX
AC   JF833420;
XX
DT   14-NOV-2011 (Rel. 110, Created)
DT   14-NOV-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Cowpea aphid-borne mosaic virus isolate LMN4 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Cowpea aphid-borne mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1188
RA   Nicolini C., Rabelo Filho F.A.C., Resende R.O., Andrade G.P.,
RA   Kitajima E.W., Pio-Ribeiro G., Nagata T.;
RT   "Possible host adaptation as an evolution factor of Cowpea aphid-borne
RT   mosaic virus deduced by coat protein gene analysis";
RL   Unpublished.
XX
RN   [2]
RP   1-1188
RA   Nicolini C., Rabelo Filho F.A.C., Resende R.O., Andrade G.P.,
RA   Kitajima E.W., Pio-Ribeiro G., Nagata T.;
RT   ;
RL   Submitted (25-APR-2011) to the INSDC.
RL   Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Av.
RL   Dom Manoel de Medeiros, s/n, Dois Irmaos, Recife, Pernambuco 52171-030,
RL   Brazil
XX
DR   MD5; 1340206ab62152ce6a67de19d9c3d2fe.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1188
FT                   /organism="Cowpea aphid-borne mosaic virus"
FT                   /host="Cassia hoffmannseggii"
FT                   /isolate="LMN4"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /collection_date="2009"
FT                   /note="acronym: CABMV"
FT                   /db_xref="taxon:12199"
FT   CDS             <1..1113
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:G8EFL7"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:G8EFL7"
FT                   /protein_id="AET21571.1"
FT                   /translation="RSKEMLHRTEAVCAAMIEAWGYPELLQEIRRYYLWLLQRDEFKEL
FT                   VNLGKAPYIAETALKKLYTDEQASEKELQRYLQDIHSFYDDCELEDVVLQSDERQKEMD
FT                   AGKEKDKAKEAREQSMQQKQARSKEVKETERDVSTSSSGQLVPRLQKISKKMNMPMVAG
FT                   RVLLNLDHLIEYKPAQIDLYNTRASKTQLSKWFEAIKEEYELDDDKMGVIMNGFMVWCI
FT                   ENGTSPDVNGVWTMMDGDEQVEFPLKPIVENAKPTLRQIMHHFSDAAEAYIEMRNSEGF
FT                   YMPRYGLLRNLRDKSLARYAFDFYEVTSKTSERAREAIAQMKAAALANVNTRMFGLDGN
FT                   VATTSENTERHTATDVNQNMHSLLGMTHGQ"
FT   mat_peptide     286..1110
FT                   /product="coat protein"
XX
SQ   Sequence 1188 BP; 389 A; 218 C; 304 G; 277 T; 0 other;
     cgcagcaagg aaatgctgca cagaacagaa gctgtgtgtg cagcaatgat cgaggcatgg        60
     ggttaccccg aactgttgca agagattagg agatactacc tctggttgtt acaaagagat       120
     gaattcaaag agttggttaa tcttggaaag gccccgtata tcgcggaaac tgctctcaag       180
     aagttatata ctgacgaaca ggcctcagaa aaggaattgc agaggtatct tcaagatatc       240
     cattctttct atgatgactg cgagttggaa gatgttgtgc ttcagtccga tgaaaggcaa       300
     aaggaaatgg atgcaggcaa ggaaaaggat aaggctaaag aagccagaga gcagtcaatg       360
     cagcaaaagc aagcgaggag caaagaagtc aaggaaacag agagggacgt ttcaactagc       420
     tcttcaggac agctagttcc acgtctacag aagattagca aaaagatgaa tatgcccatg       480
     gttgctggta gagtacttct caatttggac catttgatag aatacaagcc agcacaaatt       540
     gatttatata acaccagagc atcaaagaca cagcttagta aatggtttga ggctatcaaa       600
     gaagaatacg agctggatga tgacaagatg ggtgttatca tgaatgggtt catggtctgg       660
     tgcattgaaa atggaacttc acctgatgta aatggagtgt ggactatgat ggatggggat       720
     gagcaagtgg aatttccact caaacccatt gtggaaaatg caaaacccac actcagacaa       780
     attatgcacc acttctcaga cgcagctgaa gcgtatattg agatgagaaa ttctgaaggg       840
     ttctacatgc ccaggtacgg actgctgagg aatttaagag ataagagctt agcaaggtat       900
     gctttcgatt tctatgaagt tacatctaag acttctgaaa gagcaaggga agcaatagca       960
     caaatgaagg ctgcagctct cgccaacgtt aacaccagga tgtttggcct ggatgggaac      1020
     gtggcaacaa ctagtgagaa cactgagagg cacactgcca ctgatgttaa tcagaacatg      1080
     cattccctct tagggatgac gcatgggcag taaaggcttg ggttctgccc tcgccacagt      1140
     tatcgtttca caatcttagc taatggttgg ttttagtaaa tagtacgc                   1188
//