ID   JF833417; SV 1; linear; genomic RNA; STD; VRL; 1102 BP.
XX
AC   JF833417;
XX
DT   14-NOV-2011 (Rel. 110, Created)
DT   14-NOV-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Cowpea aphid-borne mosaic virus isolate GSR1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Cowpea aphid-borne mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1102
RA   Nicolini C., Rabelo Filho F.A.C., Resende R.O., Andrade G.P.,
RA   Kitajima E.W., Pio-Ribeiro G., Nagata T.;
RT   "Possible host adaptation as an evolution factor of Cowpea aphid-borne
RT   mosaic virus deduced by coat protein gene analysis";
RL   Unpublished.
XX
RN   [2]
RP   1-1102
RA   Nicolini C., Rabelo Filho F.A.C., Resende R.O., Andrade G.P.,
RA   Kitajima E.W., Pio-Ribeiro G., Nagata T.;
RT   ;
RL   Submitted (25-APR-2011) to the INSDC.
RL   Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Av.
RL   Dom Manoel de Medeiros, s/n, Dois Irmaos, Recife, Pernambuco 52171-030,
RL   Brazil
XX
DR   MD5; 1741468cc3741ba14d6233828f8b1ff5.
DR   EuropePMC; PMC3875471; 24386278.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1102
FT                   /organism="Cowpea aphid-borne mosaic virus"
FT                   /host="Vigna unguiculata"
FT                   /isolate="GSR1"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /collection_date="2009"
FT                   /note="acronym: CABMV"
FT                   /db_xref="taxon:12199"
FT   CDS             <1..1026
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:G8EFL4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:G8EFL4"
FT                   /protein_id="AET21568.1"
FT                   /translation="XXFYLWLLQRDEFKELASLGKAPYIAETALKKLYTDEQASEKELQ
FT                   RYLRDILSFYDDCESEDVVLQSDERQKELDAGKDKDKDKGTKEQSTQQKQTKNKGAKET
FT                   ERDVATSSSGQLVPRLQKISKKMNLPMIAGKIILNLDHLIDYKPAQIDLYNTRASKTQL
FT                   SKWFEAIKEEYELDDDKMGVVMNGFMVWCIENGTSPDINGVWTMMDGEEQVEFPLKPIV
FT                   ENAKPTLRQIMHHFSDAAEAYIEMRNSEGFYMPRYGLLRNLRDKSLARYAFDFYEVTSK
FT                   TSERAREAIAQMKAAALANVNTRMFGLDGNVATTSENTERHTATDVNQNMHSLLGMKHG
FT                   Q"
FT   mat_peptide     199..1023
FT                   /product="coat protein"
XX
SQ   Sequence 1102 BP; 367 A; 212 C; 268 G; 253 T; 2 other;
     agnangttct atctctggtt attgcaaagg gatgaattta aggagctggc tagtcttgga        60
     aaagctcctt acattgcaga aactgctctc aaaaagctct atactgatga gcaggcctca       120
     gaaaaggaat tgcagaggta tcttcgagat attctttcct tttatgacga ctgcgaatca       180
     gaagatgttg tgctccaatc tgatgaaaga caaaaagaat tggatgcagg aaaggacaaa       240
     gacaaggata aaggaaccaa agagcagtcc acacaacaga agcaaacgaa gaacaaaggg       300
     gccaaggaaa cggagaggga cgttgcaact agctcttcag ggcaattggt tccacgtttg       360
     caaaagatta gcaaaaagat gaatctcccc atgattgctg gcaaaattat tcttaatttg       420
     gaccatctga tagactacaa gccagcacaa attgacctgt acaacaccag ggcatcaaag       480
     acacagctca gtaaatggtt tgaagccatc aaggaagaat acgagctgga tgatgacaaa       540
     atgggtgttg taatgaatgg attcatggtt tggtgcattg aaaatggaac ctcacctgat       600
     attaatggag tgtggactat gatggatgga gaagaacaag tggaatttcc gcttaaaccc       660
     attgtagaaa atgcaaaacc cacactcaga caaattatgc accatttctc agacgcagct       720
     gaagcgtaca ttgagatgag aaattctgag gggttctaca tgcccaggta tggactactg       780
     aggaatttaa gggacaagag cttagcaagg tatgctttcg atttctatga agtcacatct       840
     aagacttccg aaagagcaag ggaagcaata gcacaaatga aggctgcagc tctcgccaac       900
     gttaacacca ggatgtttgg cctggatggg aacgtggcaa caactagtga gaacactgag       960
     aggcacactg ccactgatgt gaatcagaac atgcactccc tcttgggaat gaagcatggg      1020
     cagtaaaggc ttgggttccg ccctcgccac agttatcgtc tcatgacctt agctaatggt      1080
     tggttttagt aaatagtacg ca                                               1102
//