ID   JF833415; SV 1; linear; genomic RNA; STD; VRL; 1188 BP.
XX
AC   JF833415;
XX
DT   14-NOV-2011 (Rel. 110, Created)
DT   14-NOV-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Cowpea aphid-borne mosaic virus isolate LMN1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Cowpea aphid-borne mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1188
RA   Nicolini C., Rabelo Filho F.A.C., Resende R.O., Andrade G.P.,
RA   Kitajima E.W., Pio-Ribeiro G., Nagata T.;
RT   "Possible host adaptation as an evolution factor of Cowpea aphid-borne
RT   mosaic virus deduced by coat protein gene analysis";
RL   Unpublished.
XX
RN   [2]
RP   1-1188
RA   Nicolini C., Rabelo Filho F.A.C., Resende R.O., Andrade G.P.,
RA   Kitajima E.W., Pio-Ribeiro G., Nagata T.;
RT   ;
RL   Submitted (25-APR-2011) to the INSDC.
RL   Departamento de Agronomia, Universidade Federal Rural de Pernambuco, Av.
RL   Dom Manoel de Medeiros, s/n, Dois Irmaos, Recife, Pernambuco 52171-030,
RL   Brazil
XX
DR   MD5; 2d293116f1c97767ea9119c66d477814.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1188
FT                   /organism="Cowpea aphid-borne mosaic virus"
FT                   /host="Cassia hoffmannseggii"
FT                   /isolate="LMN1"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /collection_date="2009"
FT                   /note="acronym: CABMV"
FT                   /db_xref="taxon:12199"
FT   CDS             <1..1113
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:G8EFL2"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:G8EFL2"
FT                   /protein_id="AET21566.1"
FT                   /translation="RSKEMLHRTEAVCAAMIEAWGYPELLQEIRRYYLWLLQRDEFKEL
FT                   VNLGKAPYIAETALKKLYTDEQASEKELQRYLQDILSFYDDCELEDVVLQSDERQKEMD
FT                   AGKDKDKAKEAREQSMQQKQVRSKEVKETERDVSTSSSGQLVPRLQKISKKMNMPMVAG
FT                   RVLLNLDHLIGYKPAQIDLYNTRASKTQLSKWFEAIKEEYELDDDKMGVIMNGFMVWCI
FT                   ENGTSPDVNGVWTMMDGDEQVEFPLKPIVENAKPTLRQIMHHFSDAAEAYIEMRNSEGF
FT                   YMPRYGLLRNLRDKSLARYAFDFYEVTSKTSERAREAIAQMKAAALANVNTRMFGLDGN
FT                   VATTSENTERHTATDVNQNMHSLLGMTHGQ"
FT   mat_peptide     286..1110
FT                   /product="coat protein"
XX
SQ   Sequence 1188 BP; 392 A; 218 C; 299 G; 279 T; 0 other;
     cgcagcaaag aaatgctgca cagaacagaa gctgtgtgtg cagctatgat cgaggcatgg        60
     gggtatcctg aactgttgca agaaattagg agatactacc tctggttgtt acaaagagat       120
     gaattcaaag agttggtcaa tcttggaaag gccccgtaca tcgcggaaac tgctctcaag       180
     aagctataca ctgatgaaca ggcctcagaa aaggaattgc agaggtatct tcaagatatc       240
     ctttctttct atgatgactg cgaattagaa gatgttgtgc ttcaatccga tgaaaggcaa       300
     aaagaaatgg atgcaggcaa ggacaaagat aaggctaaag aggccagaga gcagtcaatg       360
     caacaaaagc aagtgaggag caaagaagtc aaggaaacag agagggacgt ttcaactagt       420
     tcttcaggac aactagttcc acgtctacaa aagattagca aaaagatgaa tatgcccatg       480
     gttgctggta gagtacttct caatttggac catttgatag gatacaagcc agcacaaatt       540
     gatctatata acaccagagc atcaaagaca cagcttagta aatggtttga ggctatcaaa       600
     gaagaatacg agctggatga tgataagatg ggtgttatca tgaatgggtt catggtttgg       660
     tgcattgaaa atggaacttc acctgatgta aatggagtgt ggactatgat ggatggggat       720
     gagcaagtgg aatttccact caaacccatt gtggaaaatg caaaacccac actcagacaa       780
     attatgcacc acttttcaga cgcagctgaa gcgtatattg agatgagaaa ttctgaaggg       840
     ttctacatgc ccaggtacgg actgctgagg aatttaagag acaagagctt agcgaggtat       900
     gctttcgatt tctatgaagt tacatctaag acttctgaaa gagcaaggga agcaatagca       960
     caaatgaagg ctgcagctct cgccaacgtt aacaccagga tgtttggcct ggatgggaac      1020
     gtggcaacaa ctagtgagaa cactgagagg cacactgcca ctgatgttaa tcagaacatg      1080
     cattccctct tagggatgac gcatgggcag taaaggcttg ggttccgccc tcgccacagt      1140
     tatcgtttca cagtcttagc taatggttgg ttttagtaaa tagtacgc                   1188
//