ID   JF825865; SV 1; linear; genomic DNA; STD; VRL; 771 BP.
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AC   JF825865;
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DT   02-OCT-2011 (Rel. 110, Created)
DT   02-OCT-2011 (Rel. 110, Last updated, Version 1)
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DE   Tomato leaf curl New Delhi virus isolate RAI-1 coat protein (AV1) gene,
DE   complete cds.
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KW   .
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OS   Tomato leaf curl New Delhi virus
OC   Viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-771
RA   Saha A., Saha B., Saha D.;
RT   "Geminiviruses infecting cultivated tomato plants of sub-Himalayan plains
RT   of northeast India: occurrence, detection, host range and diversity
RT   analysis";
RL   Unpublished.
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RN   [2]
RP   1-771
RA   Saha A., Saha B., Saha D.;
RT   ;
RL   Submitted (20-APR-2011) to the INSDC.
RL   Dept. of Botany, University of North Bengal, Rajarammohanpur, Siliguri,
RL   West Bengal 734013, India
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DR   MD5; 7d7844d059743008fe9a2fd7bfedebdf.
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FH   Key             Location/Qualifiers
FH
FT   source          1..771
FT                   /organism="Tomato leaf curl New Delhi virus"
FT                   /segment="DNA-A"
FT                   /host="Lycopersicon esculentum L."
FT                   /isolate="RAI-1"
FT                   /mol_type="genomic DNA"
FT                   /country="India:West Bengal"
FT                   /collected_by="Bikram Saha"
FT                   /collection_date="Jan-2010"
FT                   /db_xref="taxon:223347"
FT   gene            1..771
FT                   /gene="AV1"
FT   CDS             1..771
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /note="Structural protein; structural protein"
FT                   /db_xref="GOA:G4XKM6"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:G4XKM6"
FT                   /protein_id="AEP25610.1"
FT                   /translation="MVKRPADIIFSTPASKVRRRLNFDSPYGARAVVPIARVTKAKAWT
FT                   NRPMNRKPRIYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGSGLTHR
FT                   VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP
FT                   STATVKNMHRDRYQVLLKWHASVTGGTYASKEQALVSKFVRVNNYVVYNQQEAGKYENH
FT                   TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
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SQ   Sequence 771 BP; 228 A; 157 C; 183 G; 203 T; 0 other;
     atggtgaagc gaccagcaga tatcatcttt tcaacgcccg catcgaaagt acgccgacgt        60
     ctcaacttcg acagccccta tggagctcgt gcagttgtcc ccattgcccg cgtcacaaaa       120
     gcaaaggcct ggaccaacag gccgatgaac agaaaaccca gaatatacag aatgtataga       180
     agtcccgacg tgccaagggg atgtgaaggc ccttgtaagg tgcagtcctt tgaatctagg       240
     cacgatgtct ctcatattgg caaagtcatg tgtgttagtg atgttacccg aggatctgga       300
     ctcacccatc gcgtagggaa gcgattttgt gtgaaatctg tctatgtgct ggggaagata       360
     tggatggatg aaaacatcaa gacaaaaaac catactaaca gtgtcatgtt ttttttggtc       420
     cgtgaccgtc gtcctacagg atctccacaa gattttgggg aagtttttaa catgtttgac       480
     aatgaaccga gcacagcaac ggtgaaaaac atgcatcgtg atcgttatca agtcttattg       540
     aagtggcatg cttctgtgac gggagggaca tatgcatcta aggagcaagc attagttagc       600
     aagtttgtta gggttaataa ttatgttgtg tataaccaac aagaagccgg caagtatgag       660
     aatcatactg aaaacgcatt aatgttgtat atggcctgta ctcatgcatc aaatcctgtg       720
     tatgctactt tgaaaatccg gatctatttc tatgattcgg taacaaatta a                771
//