ID JF807914; SV 1; linear; genomic RNA; STD; VRL; 6674 BP. XX AC JF807914; XX DT 21-JUN-2011 (Rel. 109, Created) DT 27-MAR-2012 (Rel. 112, Last updated, Version 3) XX DE Passion fruit mosaic virus-TGP isolate 05TGP00580 putative RNA replicase DE gene, partial cds; and putative cysteine-rich protein, putative movement DE protein, and putative coat protein genes, complete cds. XX KW . XX OS Passion fruit mosaic virus-TGP OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6674 RX DOI; 10.1099/vir.0.034280-0. RX PUBMED; 22049092. RA Stobbe A.H., Melcher U., Palmer M.W., Roossinck M.J., Shen G.; RT "Co-divergence and host-switching in the evolution of tobamoviruses"; RL J. Gen. Virol. 93(Pt 2):408-418(2012). XX RN [2] RP 1-6674 RG Plant Virus Biodiversity and Ecology Consortium RA Stobbe A.H., Melcher U., Palmer M.W., Roossinck M.J., Shen G.; RT ; RL Submitted (13-APR-2011) to the INSDC. RL Biochemistry & Molecular Biology, Oklahoma State University, 246 NRC, RL Stillwater, OK 74074, USA XX DR MD5; 7f740045d058c8bff5c7e517d0317ecb. DR RFAM; RF01072; TMV_UPD-PK3. XX FH Key Location/Qualifiers FH FT source 1..6674 FT /organism="Passion fruit mosaic virus-TGP" FT /host="Passiflora incarnata" FT /isolate="05TGP00580" FT /mol_type="genomic RNA" FT /country="USA" FT /lat_lon="36.85 N 96.42 W" FT /isolation_source="upper leaves" FT /collection_date="24-Jul-2005" FT /db_xref="taxon:1167305" FT CDS <1..4805 FT /codon_start=3 FT /transl_except=(pos:3270..3272,aa:OTHER) FT /product="putative RNA replicase" FT /db_xref="GOA:F8UKG1" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:F8UKG1" FT /protein_id="AEI29173.1" FT /translation="KERLVSDVRGPIQDLASRRVYDDAVNSLRVLDRRPKINFNKLIPA FT DACKLITESYPEFTITFTGTVCSSHGLAGGLRTLETEYLMMSVPYGLPTYDIGGNFSLH FT MMKGRAYVHCCNPCMDLRDVARNESYRDNIQAYLSKFQRREPISWTTRQFKGKPARALP FT EFQLDAFKRYDEEPNAVSCSSTFQHCSYSPPEGMDTYAVSVHSLYDIPVAELGPALLRK FT RVKTLYACMHFSEALLLGSETGTLQKIGASFVVSGTKVTFGFFDESTLLYVHDLSNVKE FT MMIRTWFVADTRFVYMKEFQARRVDTVFCKFQRVDTFRLNRTVFKNNADALPDMIDDAW FT VRKRSTAMMSTEPIFKDAVSFNVWFPESKGKVLVPIFKGIFESGKVQKSTAVVDEDFVY FT TILNHIRTYPAKQLTYENVLSFVESIRSRVIVNGCNVRSEWDVEKKILPDVAMTFLLIT FT KLRQLQDQVVLERFDFKKTTIWGRIREVFHEYFSDVSGCLFETMRSYGWIQVVDDKLRI FT TTPEYYKTFTEELSLLYNRETKAEEVDVSDSLKMSNEILDVVDQLSETFDFMTFDTEKL FT NEFVKKFNVRPSVLKDVITALYNGECGVAFKDTSTPCLQGMTVETKHAGVLKSDEASTS FT HVTVEEVKKTDDQFFSFAKFNGMNVKDVLASIDSSTAKTYEGEIEVRQMENYLDYLRAS FT LSGSLSNLDKILRDYWSQSSETYKTYGVWDTRKKQWILDPPDRKHGWGLVLIGNESFVQ FT CLQYDGDNAPVCAANWERVAVSNETKLFSNVQILNELMCVEKRVPDGDLVLVEGVPGCG FT KTKEILERCNFKTDLILTPGKEAAAMIRRRANNGLGAEHATTYNVRTFDSFLINKVPVR FT FDTVWVDEGLMVHTGVIQFCRLKTDCKRMYVYGDTKQIPFINRVMTFDYPESLRNLKLN FT SVETRSVTKRCPADITVFLNSQYQCHVLTENHTQRSVEATLLKGAAVLQPRQTTLNGKI FT VVFTQADKALLKKNGYIGVNTVHEVQGDTFEEISLVRATPTPVGIIAKDSPHVLVALSR FT HTSRLHYYTVVPDYVVSKIAELKTVSNFLLDMHSFSGPSVLXQLQCKDVYIHNTKVFVP FT TPKTGSIYDLQEWYDNILPGNSTVLNDYDGTVIRLFDNELNVQQCRLTLSKADPVPEII FT RKNSKQFLRPVLRTGCEMPRTSGMIENLLAMIKRNFNSPELTGDVDIDVLSSSVVDRFF FT DVYVSVDLRTKFNSYSTLGCVDNLYISSHENFSDWLCKQQPDVVGQLANYDFIGIPPVD FT EYKHMIKKQPKLKGDCSIQSEYPALQTIVYHSKKINAIFGPIFKELTRRLIECFDSQRF FT MLYTRKTPADIEEFFSSVNGKNEMDILELDVSKYDKSQDDFHFTLEMKIWERLGLDDYI FT KVLWQNGHKRTILSDYTAGIKTVLYYQRKSGDVTTFIGNTVIIAACVCNILPIEKCIKA FT SFCGDDSLVLMPKGLDYSEVQQKANLVWNFEAKLFMKKRHAYFCGKYVVFHDNGAVVFP FT DPLKLIGKLGSKNIQSWDHCEDFRRSLCDVATNFGNCAYFSLLDEAVQENYKSAGSGCY FT AYRALWRFLTNPHLFQTLYFN" FT CDS 4809..5402 FT /codon_start=1 FT /product="putative cysteine-rich protein" FT /db_xref="UniProtKB/TrEMBL:F8UKG2" FT /protein_id="AEI29174.1" FT /translation="MSLVGKFAQSLGFCDLLLIDANVHRLTGEEKVIQKTSEYLQFFNS FT IIIRCCAVKTSGCVSFVQVRVCCNSCRRNSFCTFRCPGVKVAVSQQLVYPGEYVLRPWK FT APIPYTYKPVVYLNCTNFEHVATCTECAGCGPAARLSEPEQFCENTVAGSGKAGSGEVT FT EEDVRFDGDGCSEDIPEGKNGIPVTSHGENQGSG" FT CDS 5179..6111 FT /codon_start=1 FT /product="putative movement protein" FT /db_xref="GOA:F8UKG3" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:F8UKG3" FT /protein_id="AEI29175.1" FT /translation="MSLRAQNAQDVVPPLDYLNPSNFVKTQLLGLERLGLVKSPKKMCA FT LMETDVVKISPRERTVFPLRLTEKIKDLGNYKYVMFLACVVSGRWHVPTTVKGEVFLSL FT MDRRLTNERESVILTANAKPSVSEFQIRIHPRYSMVSSDAMQEPLELFVHVKGLQMAEG FT FSPLSLEIAFCVVCCDVVIVKSLKMKILQNTDKFGNAEGEVGSEGLDDLLSGSNMPSIR FT TSAFNSRRSVNANPKRVFKGKKGNVWSEAKDFAGVRRKKGVVESDMLTSNAESTVSNYS FT TDQSDALSTGFSTDTSMAVGQLGRLQDTS" FT CDS 5993..6526 FT /codon_start=1 FT /product="putative coat protein" FT /db_xref="GOA:F8UKG4" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:F8UKG4" FT /protein_id="AEI29176.1" FT /translation="MRSQLFRIIQLTNLMPYQPVSLQTLPWLSANWADYKTLLSVLRAT FT SATSFQTQAGRDSIRSQLAGCVSELVQVNVRFPERYLVYVNDPSISDVWGALLKATDTK FT NRIIEVDNERNPSNNEIESVTRRVDDASVAIRINIERLLKLLDGVHGVYDRALFEQVSG FT LRWADDSAPASTSK" XX SQ Sequence 6674 BP; 1812 A; 1312 C; 1708 G; 1842 T; 0 other; caaaagagag actcgtctct gatgtcagag gtcctataca ggatcttgca tcgagaagag 60 tctacgatga cgcggtcaat tcactgcgcg tgcttgaccg ccgtccaaaa atcaacttca 120 acaagttgat tccagcagat gcgtgtaagc tcataacgga gtcttacccc gagttcacaa 180 ttactttcac aggcactgtt tgctcctcgc acgggttggc ggggggttta cgcactttag 240 agactgaata tcttatgatg tcagtcccgt acggtcttcc cacttacgat attggtggaa 300 atttttcact tcatatgatg aagggaaggg cgtacgttca ttgctgcaac ccatgcatgg 360 acttaagaga tgtcgctcga aatgagtcat atcgcgacaa cattcaggcc tacttatcaa 420 agttccaacg ccgagaaccc atatcatgga ctactcggca gttcaaaggt aagcctgcca 480 gagctctacc tgagttccag ttagatgctt tcaaaaggta cgacgaagaa cctaatgctg 540 tttcgtgttc atcaacgttt cagcattgtt cttactcacc acccgaaggc atggatactt 600 atgctgtttc tgtccactcg ctgtacgaca taccggttgc cgagctcggg ccagcattgt 660 taaggaaaag ggttaaaacg ctctacgcgt gcatgcactt ttctgaggca ctgttgctag 720 gttcggaaac tggcacgctt caaaagattg gtgcttcgtt tgtggtcagt gggaccaaag 780 tcacattcgg gttttttgat gagtctactt tgttgtacgt tcacgatctc tcgaacgtaa 840 aggagatgat gatcaggacg tggttcgtgg cggatacacg gtttgtttac atgaaggagt 900 tccaagctcg acgtgtggac actgtgtttt gcaagttcca acgtgttgac actttcaggc 960 tcaacaggac agtctttaaa aataacgctg acgctctccc cgatatgatt gatgacgcat 1020 gggtgcgcaa gcgttctacg gcgatgatgt cgactgagcc gatttttaaa gacgcggtgt 1080 ccttcaacgt gtggtttcca gagagcaaag ggaaggtact cgttccaatt tttaagggta 1140 tcttcgagtc agggaaggtt cagaagtcga ccgctgtggt cgacgaggat ttcgtctaca 1200 cgatactcaa tcatatcagg acataccccg cgaaacaatt aacttacgag aatgtactat 1260 cctttgtgga gagtattcgt tcgagagtta tcgtcaacgg gtgtaacgtc agatcagaat 1320 gggatgtgga gaagaaaatt ttgccagacg tggccatgac attcttgttg ataacaaaat 1380 tacggcagct tcaagatcag gtcgtactcg aaaggtttga tttcaagaag actacaatat 1440 ggggcagaat tcgtgaagtg tttcatgagt atttcagtga tgtgtccggt tgtctattcg 1500 agacaatgag atcctacggt tggatccagg tcgtcgatga caaattacgg ataaccactc 1560 ctgagtacta caaaacattc acggaagagc tatccctact gtacaatcga gaaacgaaag 1620 ccgaagaggt tgacgtatct gattccttga agatgtcgaa tgagatcctt gatgtcgtgg 1680 accagctgag cgaaacgttc gacttcatga cgttcgacac ggagaagcta aacgagttcg 1740 tgaagaagtt caatgtaaga ccttctgtgc ttaaagatgt gatcactgcc ctgtacaacg 1800 gggagtgcgg tgtggccttc aaggacacat ctactccttg cttacaaggc atgactgtgg 1860 aaacaaaaca cgctggagtc ttgaaatctg acgaagctag tacgtctcac gtgaccgtgg 1920 aagaggtgaa gaagactgac gatcagtttt tctccttcgc caaattcaac gggatgaacg 1980 ttaaagacgt cctagcctca atcgacagct ccaccgcgaa gacttacgag ggagaaattg 2040 aggtgcgaca aatggagaat tatctggatt acttgagggc ttcactttcg ggttccttga 2100 gtaacctcga taagatattg cgtgactact ggtcacaatc gagcgaaacg tacaagactt 2160 acggtgtttg ggacacacgt aagaaacagt ggattcttga cccacccgac aggaagcatg 2220 ggtggggttt agtgctgatt gggaacgaga gctttgtgca atgcttacaa tacgacggtg 2280 acaacgctcc agtttgcgct gcgaactggg aacgcgtagc cgttagcaac gaaaccaaac 2340 ttttctccaa cgtacagata cttaatgagt tgatgtgcgt ggaaaaaagg gttccggatg 2400 gggacttggt gctggtggaa ggagtgcctg gttgtggaaa aacaaaggag atccttgaga 2460 ggtgtaattt taaaactgat ttaatcttaa cacccggaaa ggaggcagct gcgatgattc 2520 gtcggagggc gaacaatggt ttgggtgctg agcatgcgac gacttacaac gtcaggacgt 2580 tcgattcgtt cctcatcaac aaagtaccag tacggtttga taccgtttgg gttgatgagg 2640 ggttaatggt tcatactggt gttatacagt tctgccgttt gaaaacagat tgcaaaagaa 2700 tgtatgttta cggtgacaca aagcaaattc cgtttatcaa cagagtgatg acttttgatt 2760 atcctgaatc actcaggaat ctaaagttaa attctgtcga gacacggagc gtgacgaaaa 2820 ggtgtcccgc tgacattaca gtctttctca actcgcagta ccagtgccac gtgcttacag 2880 agaatcacac acaacggtcc gtggaagcga ctttactgaa aggtgcagcg gtgttacaac 2940 cgcggcaaac aacgcttaat ggtaagatcg ttgtgttcac acaagctgac aaggctctgc 3000 tgaagaagaa cggttacatt ggtgtcaata ctgtacatga ggtacaaggt gacacatttg 3060 aagagatttc gctggttcgc gcaacaccga cacctgtcgg tattatcgcg aaagactcac 3120 ctcacgtctt agtggcccta tcgaggcaca caagtcggtt acactattat acagtagtgc 3180 ccgactatgt tgtgtcaaag attgcggagc tcaagactgt gagcaacttt ctgttagata 3240 tgcatagttt tagtggtcct agtgtgttat agcaattaca gtgtaaggat gtttatattc 3300 ataatactaa agtttttgtt cctacaccga agacaggttc catttacgat ttgcaagaat 3360 ggtacgataa catactaccg ggtaattcga ctgtgcttaa cgattatgat ggcactgtga 3420 tacgtttatt cgataacgaa ttaaacgttc aacagtgccg attaacgttg agtaaagcgg 3480 atcccgttcc tgagataatc aggaaaaatt cgaagcaatt tctacgacca gttttaagaa 3540 caggttgcga aatgcctcga acgagtggta tgattgagaa ccttcttgca atgattaaaa 3600 ggaactttaa ttcaccggaa ctgacaggtg atgtggatat agatgttctg tcgtctagtg 3660 tcgtagatag gttttttgat gtctatgtta gtgtggattt acgtactaag tttaatagtt 3720 attctacttt agggtgtgta gataatctgt acatatcgtc ccacgaaaat tttagcgact 3780 ggttatgcaa acaacaacct gatgtggtcg gtcagctggc aaattacgat tttatcggaa 3840 ttccgccagt tgatgaatat aagcacatga tcaaaaagca accgaaactt aagggcgact 3900 gttctataca gtctgagtat ccggcgttgc aaacgatcgt gtaccattcg aagaagataa 3960 acgctatctt tggtccaatc ttcaaggaac tcacacgaag actcattgag tgctttgact 4020 cgcagagatt catgctgtac actcggaaga ctccggccga tattgaagaa ttcttcagtt 4080 cggtcaacgg gaaaaacgag atggatatct tggaactcga tgtgagcaag tacgataaga 4140 gtcaggacga tttccatttc accttggaga tgaagatatg ggagcgtttg ggtttagacg 4200 attacatcaa ggttttgtgg cagaatgggc acaaaaggac tatactgagt gactacacag 4260 caggaattaa aacagtgtta tactatcagc ggaagagcgg agacgtgact acgtttatag 4320 gtaacactgt gataattgcg gcttgtgttt gtaatatttt accaatcgag aagtgcatca 4380 aggcatcttt ctgcggtgac gacagtcttg ttctaatgcc caagggctta gactattctg 4440 aagttcaaca gaaagccaat ctggtgtgga atttcgaggc aaagttgttt atgaaaaagc 4500 ggcacgctta cttctgtggt aagtacgtcg tttttcatga taacggtgca gtcgtttttc 4560 ccgacccgtt gaaactcatc gggaagctcg gtagtaaaaa tatacaatca tgggaccact 4620 gtgaggattt caggcgtagt ctttgtgatg tcgctacaaa ttttggtaac tgtgcgtatt 4680 tttctttatt ggatgaggct gtccaggaga actataagtc tgcgggaagc ggttgttatg 4740 cttatcgtgc gctttggcga ttcttgacca accctcatct tttccaaact ttgtatttta 4800 attgattgat gtctctggtc ggaaagtttg ctcaatcctt ggggttttgc gatttactgt 4860 tgattgacgc taacgtgcat cgtttaaccg gtgaggagaa agtgatccag aagaccagtg 4920 agtatctgca gttctttaat agtataatta ttaggtgttg tgctgtaaag accagtgggt 4980 gtgtttcatt tgtccaagtt cgtgtgtgct gtaattcgtg taggcgtaat agtttctgta 5040 cttttcgctg tccaggtgtt aaggttgctg tttcacaaca acttgtttac ccaggtgaat 5100 acgtgctgcg tccgtggaag gctccaattc cgtacaccta taaaccagtg gtttatctga 5160 attgtacgaa tttcgaacat gtcgctacgt gcacagaatg cgcaggatgt ggtcccgccg 5220 ctagactatc tgaacccgag caattttgtg aaaacacagt tgctgggtct ggaaaggctg 5280 ggtctggtga agtcaccgaa gaagatgtgc gctttgatgg agacggatgt agtgaagata 5340 tccccgaggg aaagaacggt attcccgtta cgtctcacgg agaaaatcaa ggatctgggt 5400 aactacaagt atgttatgtt cttggcttgt gtggtcagtg gtagatggca tgtgcctaca 5460 actgttaaag gagaagtctt tctgagtctt atggacagga ggttgacaaa cgagcgtgag 5520 agtgttattc tcactgccaa tgccaaacca agtgtcagtg agtttcagat aagaattcat 5580 ccacggtatt cgatggtctc atcggatgcg atgcaggaac ctttagagtt gttcgtacat 5640 gtcaagggtt tgcagatggc ggagggtttc agtcctttat cactagagat agctttttgt 5700 gtcgtttgtt gtgatgttgt gattgtaaaa agtttaaaaa tgaaaatatt gcagaacact 5760 gacaaattcg ggaatgcgga gggagaagtt ggtagcgaag gcttggacga cctattatca 5820 ggtagtaaca tgcccagcat acggacttct gctttcaatt cgcgaaggag cgtgaatgca 5880 aacccaaaaa gagtttttaa gggaaagaaa gggaatgtgt ggagtgaggc aaaggatttt 5940 gctggtgtaa ggagaaagaa aggtgtggtt gaatcggata tgttgacttc taatgcggag 6000 tcaactgttt cgaattattc aactgaccaa tctgatgcct tatcaaccgg tttctctaca 6060 gacacttcca tggctgtcgg ccaactgggc cgactacaag acacttctta gtgtcttaag 6120 ggcgacttcg gcaacgtctt ttcagacgca ggccggacgc gattctatac gttcacaact 6180 ggctggatgt gtcagcgaac tagttcaagt caacgtgagg tttcccgaac gttacttggt 6240 ctatgtcaat gacccatcta tcagtgatgt gtggggtgca cttttgaagg cgacggatac 6300 caaaaatcgt ataattgagg tggataacga gaggaacccg tcgaacaacg aaattgaatc 6360 tgtcacacga cgtgtagatg atgcttctgt ggccattcgc attaatatcg aacggttgct 6420 gaagttgctt gatggggtgc acggtgtcta cgaccgtgcc ttgtttgaac aagttagtgg 6480 attgcggtgg gctgatgact cagctcccgc gtctacttcg aagtagcgtg gcgcatacga 6540 gaatgcgtag tgtttatccc gttccactga aatcgaaacg ggtgatctgc ataattgcag 6600 ttgcttggct ggatcaacgt accgtgagga gagaaatcat acggtatgcc gagcgttaaa 6660 aggttgaggg ccca 6674 //