ID   JF804795; SV 1; linear; genomic RNA; STD; VRL; 1517 BP.
XX
AC   JF804795;
XX
DT   26-SEP-2011 (Rel. 110, Created)
DT   26-SEP-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Potato virus Y isolate 08-rol polyprotein gene, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1517
RA   Golnik K., Szyndel M.S.;
RT   "Estimation of diversification among strains of Potato virus Y";
RL   Unpublished.
XX
RN   [2]
RP   1-1517
RA   Golnik K., Szyndel M.S.;
RT   ;
RL   Submitted (13-APR-2011) to the INSDC.
RL   Department of Plant Pathology, Warsaw University of Life Sciences,
RL   Nowoursynowska 159, Warsaw 02-787, Poland
XX
DR   MD5; 8f4ce90aba1d614045f3cb1501d49b57.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1517
FT                   /organism="Potato virus Y"
FT                   /host="tomato"
FT                   /lab_host="tobacco"
FT                   /strain="N-Wi"
FT                   /isolate="08-rol"
FT                   /serotype="O"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /collected_by="Golnik"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..>1517
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /note="contains genome-linked protein (VPg)"
FT                   /db_xref="GOA:G3GAQ4"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="InterPro:IPR013648"
FT                   /db_xref="UniProtKB/TrEMBL:G3GAQ4"
FT                   /protein_id="AEO98491.1"
FT                   /translation="LRDCMTPLCDQSIPYRASSTWLSVSEYERLGVALEIPKQVKIAFH
FT                   IKEIPPKLHEMLWETVVKYKDVCLFPSIRASSISKIAYTLRTDLFAIPRTLILVERLLE
FT                   EERVKQSQFRSLIDEGCSSMFSIVNLTNTLRARYAKDYTAENIQKLEKVRSQLKEFSNL
FT                   DGSACEENLIKRYESLQFVHHQAATSLAKDLKLKGTWKKSLVAKDLIIAGAVAIGGIGL
FT                   IYSWFTQSVETVSHQGKNKSKRIQALKFRHARDKRAGFEIDNNDDTIEEFFGSAYRKKG
FT                   KGKGTTVGMGKSSRRFINMYGFDPTEYSFIQFVDPLTGAQIEENVYADIRDIQERFSEV
FT                   RKKMVENDDIEMQALGSNTTIHAYFRKDWSDKALKIDLMPHNPLKVCDKTNGIAKFPER
FT                   ELELRQTGPAVEVDVKDIPAQEVEHEAKSLMRGLRDFNPIAQTVCRLKVSVEYGTSEMY
FT                   GFGFGAYIIANHHLFRSYNGSMEVRSMHGTFRVKNLHSLSVLPIKGR"
XX
SQ   Sequence 1517 BP; 498 A; 284 C; 363 G; 372 T; 0 other;
     aacttcgaga ttgtatgaca cctttgtgcg atcagtctat accatacagg gcatcgagca        60
     cttggttatc ggttagtgaa tatgagcgac ttggagtggc cttagaaatt ccaaagcaag       120
     tcaaaattgc attccatatc aaagagatcc ctcctaagct ccacgaaatg ctttgggaaa       180
     cggttgtcaa gtacaaagac gtttgcttat ttccaagcat tcgagcatcg tccatcagca       240
     aaatcgcata cacattgcgt acagacctct tcgccatccc aagaactcta atattggtgg       300
     agagactgct tgaagaggag cgagtgaagc aaagccaatt cagaagtctc atcgatgaag       360
     gatgctcaag catgttttca attgtcaacc tgacaaacac tctcagagct agatatgcaa       420
     aagactacac cgcagagaac atacaaaaac ttgagaaagt gagaagtcaa ttgaaagagt       480
     tctcaaattt ggatggttct gcatgtgagg aaaatttaat aaagaggtat gagtctttgc       540
     agttcgttca tcaccaagct gcgacgtcac ttgcaaagga tctcaagttg aaggggactt       600
     ggaagaagtc attagtggcc aaagacttga tcatagcagg cgctgttgca attggtggaa       660
     taggactcat atatagttgg ttcacacaat cagttgagac tgtgtctcac caaggtaaaa       720
     ataaatccaa aagaattcaa gccttgaagt ttcgccatgc tcgtgacaaa agggctggct       780
     ttgaaattga caacaatgat gacacaatag aggaattctt tggatctgca tacaggaaaa       840
     agggaaaagg taaaggtacc acagttggta tgggcaagtc aagcaggagg ttcatcaaca       900
     tgtatgggtt tgatccaaca gagtactcat tcatccaatt cgttgatcca ctcactgggg       960
     cgcaaataga agagaatgtc tatgctgaca ttagagatat tcaagagaga tttagtgaag      1020
     tgcgaaagaa aatggttgag aatgatgaca ttgaaatgca agccttgggc agtaacacga      1080
     ccatacatgc atacttcagg aaagattggt ctgacaaagc tttgaagatt gatttaatgc      1140
     cacataatcc actcaaagtt tgtgacaaga caaatggcat tgccaaattt cctgagagag      1200
     agctcgaact aaggcagact gggccagctg tagaagtcga cgtgaaggac ataccagcac      1260
     aggaggtgga gcatgaagct aaatcgctca tgagaggctt gagagacttc aacccaattg      1320
     cccaaacagt ttgtaggctg aaagtatctg ttgaatatgg gacatcagag atgtacggtt      1380
     ttggatttgg agcatacata atagcgaacc accatttgtt caggagttac aatggttcca      1440
     tggaggtgcg atccatgcac ggtacattca gggtgaagaa tctacacagt ttgagcgttc      1500
     tgccaattaa aggaagg                                                     1517
//