ID   JF804794; SV 1; linear; genomic RNA; STD; VRL; 1532 BP.
XX
AC   JF804794;
XX
DT   26-SEP-2011 (Rel. 110, Created)
DT   26-SEP-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Potato virus Y isolate 08-11b polyprotein gene, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1532
RA   Golnik K., Szyndel M.S.;
RT   "Estimation of diversification among strains of Potato virus Y";
RL   Unpublished.
XX
RN   [2]
RP   1-1532
RA   Golnik K., Szyndel M.S.;
RT   ;
RL   Submitted (13-APR-2011) to the INSDC.
RL   Department of Plant Pathology, Warsaw University of Life Sciences,
RL   Nowoursynowska 159, Warsaw 02-787, Poland
XX
DR   MD5; 5be725aca7ca9c40988850acdb8a3438.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1532
FT                   /organism="Potato virus Y"
FT                   /host="Capsicum annuum"
FT                   /lab_host="tobacco"
FT                   /strain="NTN"
FT                   /isolate="08-11b"
FT                   /serotype="N"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /collected_by="Golnik"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..>1532
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains genome-linked protein (VPg)"
FT                   /db_xref="GOA:G3GAQ3"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="InterPro:IPR013648"
FT                   /db_xref="UniProtKB/TrEMBL:G3GAQ3"
FT                   /protein_id="AEO98490.1"
FT                   /translation="LRDCMTPLCDQSIPYRASSTWLSVSEYERLGVALEIPKQVKIAFH
FT                   IKEIPPKLHEMLWETVVKYKDVCLFPSIRASSISKIAYTLRTDLFAIPRTLILVERLLE
FT                   EERVKQSQFRSLIDEGCSSMFSIVNLTNTLRARYAKDYTAENIQKLEKVRSQLKEFSNL
FT                   DGSACEENLIKRYESLQFVHHQAATSLAKDLRLKGTWKKSLVAKDLIIAGAVAIGGIGL
FT                   IYSWFTQSVETVSHQGKNKSKRIQALKFRHARDKRAGFEIDNNDDTIEEFFGSAYRKKG
FT                   KGKGTTVGMGKSSRRFVNMYGFDPTEYSFIQFVDPLTGAQIEENVYADIRDIQERFSDV
FT                   RKKMVEDDEIELQALGSNTTIHAYFRKDWSDKALKIDLMPHNPLKICDKSNGIAKFPER
FT                   ELELRQTGPAIEVDVKDIPKQEVEHEAKSLMRGLRDFNPIAQTVCRVKVSVEYGTSEMY
FT                   GFGFGAYIIVNHHLFKSFNGSMEVRSMHGTFRVKNLHSLSVLPIKGRDIIII"
XX
SQ   Sequence 1532 BP; 504 A; 281 C; 356 G; 391 T; 0 other;
     cttcgagatt gtatgacacc tttgtgcgat cagtctatac catacagggc atcgagcact        60
     tggctatcgg ttagtgaata tgagcgactt ggagtggcct tagaaattcc aaagcaagtc       120
     aaaattgcat tccatatcaa agagatccct cctaagctcc acgaaatgct ttgggaaacg       180
     gttgtcaagt acaaagacgt ttgcttattt ccaagcattc gagcatcgtc catcagcaaa       240
     atcgcataca cattgcgtac agacctcttc gccatcccaa gaactctaat attggtggag       300
     agactgcttg aagaggagcg agtgaagcag agccaattca gaagtctcat cgacgaagga       360
     tgctcaagca tgttttcaat tgtcaacttg acaaacactc tcagagctag atatgcaaaa       420
     gattacaccg cagagaatat acaaaaactt gagaaagtga gaagtcaatt gaaagaattc       480
     tcaaatttgg atggttctgc atgtgaggaa aatttaataa agaggtatga gtctttgcag       540
     ttcgttcatc accaagctgc gacgtcactt gcaaaggatc tcaggttgaa ggggacttgg       600
     aagaagtcat tagtggccaa agacttgatc atagcaggcg ctgttgcaat tggtggaata       660
     ggactcatat atagttggtt cacacaatca gttgagactg tgtctcacca agggaaaaat       720
     aaatccaaaa gaattcaagc cttgaagttt cgccatgctc gtgacaaaag ggctggcttt       780
     gaaattgaca acaatgatga cacaatagag gaattctttg gatctgcata caggaagaag       840
     ggaaaaggta aaggcaccac tgttggtatg ggcaagtcaa gcaggaggtt tgttaatatg       900
     tatggatttg acccaacaga atattcattc atccagttcg ttgatccgct cactggagct       960
     caaattgaag agaacgtcta tgctgatatt agagacatcc aagagcgctt tagtgatgtc      1020
     cgcaagaaaa tggtagagga tgatgaaatt gaattgcaag cattgggcag caacacaacc      1080
     attcatgctt acttcaggaa agattggtct gacaaggctc taaaaattga tttgatgcca      1140
     cacaacccac tcaaaatctg tgataaatcg aatggcattg ctaagtttcc tgaaagagaa      1200
     ctcgagttga ggcaaactgg gccagcaata gaggttgatg tgaaagacat tccaaaacag      1260
     gaagtggagc atgaagccaa atcactcatg agaggtttaa gggatttcaa tccaattgct      1320
     caaacagttt gcagagtaaa agtgtctgtt gaatatggaa cgtctgaaat gtatgggttc      1380
     ggttttggtg cgtatattat agtaaaccac catctattca agagtttcaa tggatccatg      1440
     gaagtgcgat caatgcatgg aacattcaga gtgaagaatt tgcatagctt gagcgtttta      1500
     ccgatcaaag gcagagacat tatcatcata aa                                    1532
//