ID JF804777; SV 1; linear; genomic RNA; STD; VRL; 3072 BP. XX AC JF804777; XX DT 26-SEP-2011 (Rel. 110, Created) DT 26-SEP-2011 (Rel. 110, Last updated, Version 1) XX DE Potato virus Y isolate 08-44a polyprotein gene, partial cds. XX KW . XX OS Potato virus Y OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-3072 RA Golnik K., Szyndel M.S.; RT "Estimation of diversification among strains of Potato virus Y"; RL Unpublished. XX RN [2] RP 1-3072 RA Golnik K., Szyndel M.S.; RT ; RL Submitted (13-APR-2011) to the INSDC. RL Department of Plant Pathology, Warsaw University of Life Sciences, RL Nowoursynowska 159, Warsaw 02-787, Poland XX DR MD5; 1b1c8788ab6132c1fd62b85b090695a6. XX FH Key Location/Qualifiers FH FT source 1..3072 FT /organism="Potato virus Y" FT /host="tomato" FT /lab_host="tobacco" FT /strain="N-Wi" FT /isolate="08-44a" FT /serotype="O" FT /mol_type="genomic RNA" FT /country="Poland" FT /collected_by="Golnik" FT /collection_date="2008" FT /db_xref="taxon:12216" FT CDS 138..>3072 FT /codon_start=1 FT /product="polyprotein" FT /note="contains P1 protein and HC protease" FT /db_xref="GOA:G3GAN6" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR002540" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR039560" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:G3GAN6" FT /protein_id="AEO98473.1" FT /translation="MATYMSTICFGSFECKLPYSPASCGHIVKEREVLASVDPFADLET FT QLSARLLKQEYATVRVLKNGTLTYRYKTDAQITRIQKKLERKDREEYHFQMAAPSIVSK FT ITIAGGDPPSKSEPQAPRGIIHTTPRVRKVKTRPIIKLTEGQMNHLIKQVKQIMSEKRG FT SVHLISKKSTHVHYKEVLGSHRAVVCTAHMRGLRKRVDFRCDKWTVVRLQHLARTDKWN FT NQVRATDLRKGDSGVILSNTNLKGNFGRSSEGLFIVRGSHEGKIYDARSKVTQGVMDSM FT VQFSSAESFWKGLDGNWAQMRYPTDHTCVAGLPVEDCGRVAAIVTHSILPCYKITCPTC FT AQQYANLPASDLLKILHKHASDGLNRLGADKDRFVHVKKFLTILEHLTEPVDLSLEIFN FT EVFKSIGEKQQSPFKNLNILNNFFLKGKENTAREWQVAQLSLLELARFQKNRTDNIKKG FT DISFFRNKLSGKANWNLYLSCDNQLDKNANFLWGQREYHAKRFFSNYFEEIDPAKGYSA FT YENRLHPNGTRKLAIGNLIVPLDLAEFRRKMKGDYKRQPGVSKKCTSSKDGNYVYPCCC FT TTLDDGSAVESTFYPPTKKHLVIGNSGDQKYVDLPKGNSEMLYIARQGFCYINIFLAML FT INISEEDAKDFTKKVRDMCVPKLGTWPTMMDLATTCAQMKIFYPDVHDAELPRILVDHE FT TQTCHVVDSFGSQTTGYHILKASSVSQLILFANDELESDIKHYRVGGVPNACPELGSTI FT SPFREGGVIMSESAALKLLLKGIFRPKVMRQLLLDEPYLLILSILSPGILMAMYNNGIF FT ELAVRLWINEKQSIAMIASLLSALALRVSAAETLVAQRIIIDTAATDLLDATCDGFNLH FT LTYPTALMVLQVVKNRNECDDTLFKAGFPSYNTSVVQIMEKNYLNLLNDAWKDLTWREK FT LSATWYSYRAKRSITRYIKPTGRADLKGLYNISPQAFLGRGAQVVKGT" XX SQ Sequence 3072 BP; 951 A; 605 C; 703 G; 813 T; 0 other; cataaacgct tattctcact caagcaactt gctaagtttc agttcaaatc atttccttgc 60 aattctctta aacgatattg gaaaccattt caactcaaca agtaatttca tcacttccaa 120 ccaattttag atcctcaatg gcaacttaca tgtcaacaat ctgtttcggt tcgtttgaat 180 gcaagctacc atactcaccc gcctcttgcg ggcatattgt gaaggaacga gaagtgctgg 240 cttccgttga tcctttcgca gatctggaaa cacaacttag tgcacgattg ctcaagcaag 300 aatatgctac tgttcgtgtg ctcaagaacg gtactcttac gtaccgatac aagactgatg 360 cccagataac gcgcatccag aagaaactgg aaaggaagga tagggaagaa tatcacttcc 420 agatggcagc tcctagtatt gtgtcaaaaa ttactatagc tggtggggat cctccatcaa 480 agtctgagcc acaagcacca agaggtatca ttcatacaac tccaagggtg cgtaaagtca 540 agacacgccc cataataaag ttgacggaag gccagatgaa tcatctcatt aagcaggtga 600 agcagattat gtcggagaag agagggtctg ttcacttaat tagcaagaaa agtacccatg 660 ttcactataa agaagttttg ggatcacatc gcgcagttgt ttgcactgca catatgagag 720 gtttacgaaa gagagtggac tttcggtgtg ataaatggac cgttgtgcgt ctacagcatc 780 tcgccaggac ggacaagtgg aataaccaag ttcgtgctac tgatctacgc aagggcgata 840 gtggagttat attgagtaat actaatctca aaggaaactt tgggagaagc tcggagggcc 900 tattcatagt gcgtgggtcg cacgaaggaa aaatctatga tgcacgttcc aaggttactc 960 aaggggttat ggattcaatg gttcagttct caagcgctga aagcttttgg aagggattgg 1020 acggcaattg ggcacaaatg agatatccta cagatcatac atgtgtggca ggcttaccag 1080 ttgaagactg cggcagagtt gcagcgatag tgacacacag tattttaccg tgctataaga 1140 taacctgccc tacctgtgcc caacaatatg ccaacttgcc agccagtgac ttacttaaga 1200 tattacacaa gcacgcaagt gatggtttaa atcgattggg ggcagacaaa gatcgctttg 1260 tgcatgtcaa aaagttcttg acaatcttag agcacttaac tgaaccggtt gatctgagtc 1320 tagaaatttt caatgaagta ttcaagtcta taggggagaa gcaacaatca cctttcaaaa 1380 acctgaatat tctgaataat ttctttttga aaggaaagga aaatacagct cgtgaatggc 1440 aggtggctca attaagctta cttgaattgg caagattcca aaagaacaga acggataata 1500 tcaagaaagg agacatctcg ttctttagga ataaactatc tggcaaagca aattggaact 1560 tgtatctgtc atgtgataac cagctggata agaatgcaaa cttcctgtgg ggacagaggg 1620 aatatcatgc taagcgattt ttctcgaact atttcgagga aattgatcca gcgaagggct 1680 attcagcata cgaaaatcgt ttgcatccga atgggacaag aaaacttgca attggaaacc 1740 taattgtacc acttgatctg gctgagttta ggcggaagat gaaaggtgat tataaaagac 1800 agccaggggt gagtaagaag tgcacgagct cgaaggatgg aaactacgtg tatccctgtt 1860 gttgcactac actcgatgat ggctcagctg ttgaatcaac attttacccg ccaactaaga 1920 agcacctcgt aataggtaat agtggcgacc aaaagtatgt tgacttacca aaagggaatt 1980 ctgagatgtt atatattgcc aggcaaggct tctgttacat taacattttc ctcgcgatgt 2040 tgattaacat tagtgaggaa gatgcaaagg atttcactaa gaaggttcgt gacatgtgtg 2100 tgccaaagct tggaacctgg ccaaccatga tggatctggc tacaacttgt gctcaaatga 2160 aaatattcta ccctgatgtt catgatgcag aactgcctag aatactagtc gatcacgaaa 2220 cgcagacatg ccatgtggtt gactcgtttg gctcacaaac aactgggtat catattttga 2280 aagcatctag cgtgtcccaa cttattttgt ttgctaatga tgagttggag tctgacatta 2340 aacattatag agttggtggt gttcctaatg catgccctga acttgggtcc acaatatcac 2400 ctttcagaga aggaggagtt ataatgtctg agtcggcagc gctgaaactg cttttgaagg 2460 gaatttttag acctaaggtg atgagacagt tgctgttaga tgagccttac ctgttgattc 2520 tatcaatatt atcccctggc atactgatgg ctatgtacaa taatgggatt tttgaacttg 2580 cggtaaggtt gtggattaat gagaaacaat ccatagctat gatagcatcg ctactatcag 2640 ctttagccct acgagtgtca gcggcagaaa cactcgtcgc acagaggatt ataattgata 2700 ctgcagctac agatctcctt gatgctacgt gcgatgggtt caacctacat ctaacgtacc 2760 ctactgcgtt gatggtgttg caagttgtta agaatagaaa tgaatgtgat gataccctat 2820 tcaaggcggg ttttccaagt tacaacacga gcgtcgtaca gatcatggaa aaaaattatc 2880 taaatctctt gaacgatgct tggaaagatt taacttggcg ggaaaaatta tccgcaacat 2940 ggtactcata cagagcaaaa cgctctatca ctcgatacat aaaacccaca ggaagggcag 3000 atttgaaagg gttatacaac atatcaccac aagcattctt gggccgaggc gcccaggtgg 3060 tcaaaggcac tg 3072 //