ID   JF804776; SV 1; linear; genomic RNA; STD; VRL; 1646 BP.
XX
AC   JF804776;
XX
DT   26-SEP-2011 (Rel. 110, Created)
DT   26-SEP-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Potato virus Y isolate 09-3c polyprotein gene, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1646
RA   Golnik K., Szyndel M.S.;
RT   "Estimation of diversification among strains of Potato virus Y";
RL   Unpublished.
XX
RN   [2]
RP   1-1646
RA   Golnik K., Szyndel M.S.;
RT   ;
RL   Submitted (13-APR-2011) to the INSDC.
RL   Department of Plant Pathology, Warsaw University of Life Sciences,
RL   Nowoursynowska 159, Warsaw 02-787, Poland
XX
DR   MD5; 02fc18b0dd8488d47a95aee264c7b5f1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1646
FT                   /organism="Potato virus Y"
FT                   /host="potato"
FT                   /strain="N-Wi"
FT                   /isolate="09-3c"
FT                   /serotype="O"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /collected_by="Golnik"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..>1646
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /note="contains HC protease"
FT                   /db_xref="GOA:G3GAN5"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:G3GAN5"
FT                   /protein_id="AEO98472.1"
FT                   /translation="SSEGLFIVRGSHEGKIYDARSKVTQGVMDSMVQFSSAESFWKGLD
FT                   GNWAQMRYPTDHTCVAGLPIEDCGRVAAIMTHSILPCYKITCPTCAQQYANLPASDLLK
FT                   ILHKHASDGLNRLGADKDRFVHVKKFLTILEHLTEPVDLSLEIFNEVFKSIGEKQQSPF
FT                   KNLNILNNFFLKGKENTAREWQVAQLSLLELARFQKNRTDNIKKGDISFFRNKLSAKAN
FT                   WNLYLSCDNQLDKNANFLWGQREYHAKRFFSNYFEEIDPAKGYSAYENRLHPNGTRKLA
FT                   IGNLIVPLDLAEFRRKMKGDYKRQPGVSKKCTSSKDGNYVYPCCCTTLDDGSAVESTFY
FT                   PPTKKHLVIGNSGDQKYVDLPKRNSEMLYIARQGFCYINIFLAMLINISEEDAKDFTKK
FT                   VRDMCVPKLGTWPTMMDLATTCAQMKIFYPDVHDAELPRILVDHETQTCHVVDSFGSQT
FT                   TGYHILKASSVSQLILFANDELESDIKHYRVGGVPNACPELGSTISPFREGGVIMSESA
FT                   ALKLLLKGIFRPKVMRQLLLDEPYLLILSIL"
XX
SQ   Sequence 1646 BP; 511 A; 301 C; 384 G; 450 T; 0 other;
     agagctcgga gggcctattc atagtgcgtg ggtcgcacga aggaaaaatc tatgatgcac        60
     gttccaaggt tactcaaggg gttatggatt caatggttca gttctcaagc gctgaaagct       120
     tttggaaggg attggacggc aattgggcac aaatgagata tcctacagat catacatgtg       180
     tggcaggctt accaattgaa gactgcggca gagttgcagc gataatgaca cacagtattt       240
     taccgtgcta taagataacc tgccctacct gtgcccaaca atatgccaac ttgccagcca       300
     gtgacttact taagatatta cacaagcacg caagtgatgg tttaaatcga ttgggggcag       360
     acaaagatcg ctttgtgcat gtcaaaaagt tcttgacaat cttagagcac ttaactgaac       420
     cggttgatct gagtctagaa attttcaatg aagtattcaa gtctataggg gagaagcaac       480
     aatcaccttt caaaaacctg aatattctga ataatttctt tttgaaagga aaggaaaata       540
     cagctcgtga atggcaggtg gctcaattaa gcttacttga attggcaaga ttccaaaaga       600
     acagaacgga taatatcaag aaaggagaca tctcgttctt taggaataaa ctatctgcca       660
     aagcaaattg gaacttgtat ctgtcatgtg ataaccagct ggataagaat gcaaacttcc       720
     tgtggggaca gagggaatat catgctaagc gatttttctc gaactatttc gaggaaattg       780
     atccagcgaa gggctattca gcatatgaaa atcgtttgca tccgaatggg acaagaaaac       840
     ttgcaattgg aaacctaatt gtaccacttg atctggctga gtttaggcgg aagatgaaag       900
     gtgattataa aagacagcca ggggtgagta agaagtgcac gagctcgaag gatggaaact       960
     acgtgtatcc ctgttgttgc actacacttg atgatggctc agctgttgaa tcaacatttt      1020
     acccgccaac taagaagcac cttgtaatag gtaatagtgg cgaccaaaag tatgttgact      1080
     taccaaaaag gaattctgag atgttatata ttgccaggca aggcttctgt tacattaaca      1140
     ttttcctcgc gatgttgatt aacattagtg aggaagatgc aaaggatttc actaagaagg      1200
     ttcgtgacat gtgtgtgcca aagcttggaa cctggccaac catgatggat ctggctacaa      1260
     cttgtgctca aatgaaaata ttctaccctg atgttcatga tgcagaactg cctagaatac      1320
     tagtcgatca cgaaacgcag acatgccatg tggttgactc gtttggctca caaacaactg      1380
     ggtatcatat tttgaaagca tctagcgtgt cccaacttat tttgtttgct aatgatgagt      1440
     tggagtctga cattaaacat tatagagttg gtggtgttcc taatgcatgc cctgaacttg      1500
     ggtccacaat atcacctttc agagaaggag gagttataat gtctgagtcg gcagcgctga      1560
     aactgctttt gaagggaatt tttagaccta aggtgatgag acagttgctg ttagatgagc      1620
     cttacctgtt gattctatca atatta                                           1646
//