ID JF803254; SV 1; circular; genomic DNA; STD; VRL; 2564 BP. XX AC JF803254; XX DT 10-OCT-2011 (Rel. 110, Created) DT 05-APR-2012 (Rel. 112, Last updated, Version 3) XX DE Tomato golden vein virus isolate DF[BR:Ita1220:03] segment DNA-A, complete DE sequence. XX KW . XX OS Tomato golden vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2564 RX DOI; 10.1007/s00705-011-1213-7. RX PUBMED; 22218964. RA Albuquerque L.C., Varsani A., Fernandes F.R., Pinheiro B., Martin D.P., RA de Tarso Oliveira Ferreira P., Lemos T.O., Inoue-Nagata A.K.; RT "Further characterization of tomato-infecting begomoviruses in Brazil"; RL Arch. Virol. 157(4):747-752(2012). XX RN [2] RP 1-2564 RA Albuquerque L.C., Varsani A., Pinheiro B., Fernandes F.R., Martins D.P., RA Ferreira P.T.O., Lemos T.O., Inoue-Nagata A.K.; RT ; RL Submitted (13-APR-2011) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; 27d006c96477660d2fb3ff423424f232. XX FH Key Location/Qualifiers FH FT source 1..2564 FT /organism="Tomato golden vein virus" FT /segment="DNA-A" FT /host="Solanum lycopersicum" FT /isolate="DF[BR:Ita1220:03]" FT /mol_type="genomic DNA" FT /country="Brazil:Goias" FT /collection_date="2003" FT /clone="1220" FT /note="acronym: TGVV" FT /db_xref="taxon:296190" FT CDS 156..902 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:G4XFT4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:G4XFT4" FT /protein_id="AEP82981.1" FT /translation="MPKRDAPWRIVAGTTKVSRSSNYSPRGGIPKRDAWVNRPMYRKPR FT IYRTLRGPDVPKGCEGPCKVQSYEQRHDISHLGKVMCISDVTRGNGITHRVGKRFCVKS FT VYILGKIWMDENIKLKNHTNSVIFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDL FT RDRYQVIHRFNAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEASEVRESIPENALLLY FT MACTHASNPVYATLKIRIYFYDSISN" FT CDS complement(899..1297) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:G4XFT5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:G4XFT5" FT /protein_id="AEP82982.1" FT /translation="MDSRTAEPITVPQAENGVFIWEITNPLYFKITNVEDPYYTTTRIY FT HVQIRFNHNLRKALGLHKAFLNFQVWTTSLRASGMTYLTRFRYFVLLYLNQLGIISINN FT VIRAVRFATDKSYVNYVLENHSIKFKLY" FT CDS complement(1044..1433) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:G4XFT6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:G4XFT6" FT /protein_id="AEP82983.1" FT /translation="MLNSSSSTPPSIKPRHRAAKQKTTRRKRIDLNCGCSIYIHINCRN FT NGFTHRGTHHCASSREWRLYLGDYKSPLFQDNQRRGPLLYNDQDIPCADTFQPQPAESV FT GSPQGISKFPSLDDIPESFWDDIFN" FT CDS complement(1354..2430) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:G4XFT7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:G4XFT7" FT /protein_id="AEP82984.1" FT /translation="MPPPKRFTVNAKNFFLTYPHCSLTKEETLSQLQTLKTPTNKKFIR FT VTREFHEDGEPHLHVLIQFEGKFKCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKTYM FT EKDGDFIDFGNFQIDGRSARGGCQTANDTYAKVLNAENLSKALNILKEEQPRDYVLHLD FT KIQSHVQKIFAKAPAPWVPIFELSSFTHVPDEMQQWADEYFGRGAAARPERPISIIIEG FT DSRTGKTMWARALGPHNYLSGHLDFNSKVYSNEVEYNVIDDVTPHYLKMKHWKELIGSQ FT RDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKHENASLRAWTLHNAKFIFLN FT SPLYQATAQSRQTENNQA" FT CDS complement(2016..2273) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:G4XFT8" FT /protein_id="AEP82985.1" FT /translation="MGNLISMCLFNSKANSNARINGSSTWYPQQDQHISIQTFRELKAR FT PTSRPTWKKTETSLILEISRSMEDQQEEAAKLPMTLMRRF" XX SQ Sequence 2564 BP; 688 A; 473 C; 590 G; 813 T; 0 other; accggatggc cgcgcgattt tttaaagtgg tcccactgtg agtgaccaat cagattgtgt 60 cttggacggt tatttatttc gaaatactta ggcgctaagt tgttaaagtt gtataaatta 120 gacattcata agtggtcgac atattttaat tcaaaatgcc aaagcgagat gccccatggc 180 gtatagtggc agggaccacg aaagtatccc gctcttctaa ttattcacct cggggaggta 240 tacccaagcg ggatgcttgg gtaaacaggc ccatgtacag gaagcccagg atatatcgta 300 cgttgagagg gcctgatgtt cctaaagggt gtgaaggccc atgtaaagtt caatcctatg 360 agcaacgtca tgacatttct catcttggca aggtgatgtg tatctctgat gtgacacgtg 420 gtaatggtat tacacaccgt gttggtaagc gtttttgcgt taagtctgtg tacatattgg 480 gtaagatatg gatggacgaa aatattaaac tgaagaacca taccaacagt gttatttttt 540 ggttagtgag ggatcgtaga ccctatggga cacctatgga ttttggtcag gtgtttaaca 600 tgtttgataa tgagcctagt actgctacgg tgaagaacga tcttcgtgat cgttatcaag 660 tcattcatcg attcaatgct aaggttacgg gtggacagta tgctagcaac gagcaagctc 720 ttgttcggcg tttctggaag gtcaataatc atgtagttta taatcatcag gaagccagcg 780 aagtacgaga atccataccg gagaatgctc tgttattgta tatggcatgt acacatgcct 840 ctaatcccgt gtatgctact ttgaaaattc ggatctattt ttatgattcg atttcaaatt 900 aataaagttt aaattttatt gaatgatttt cgagtacata atttacataa gatttgtctg 960 ttgcgaaacg aacagctctg attacattgt taatggaaat aatacctaat tggttcagat 1020 acaataaaac gaaatatcta aatctagtta aatatgtcat cccagaagct ctcagggatg 1080 tcgtccagac ttggaaattt agaaatgcct tgtggagacc caacgctttc cgcaggttgt 1140 ggttgaaacg tatctgcaca tggtatatcc tggtcgttgt ataatagggg tcctcgacgt 1200 tggttatctt gaaatagagg ggatttgtaa tctcccaaat aaagacgcca ttctctgctt 1260 gaggcacagt gatgggttcc gcggtgcgtg aatccattat ttctacagtt gatgtggatg 1320 tatatggagc agccgcagtt taggtctatg cgtttacgcc tggttgtttt ctgtttggcg 1380 gctctgtgcc gtggcttgat agagggggga gttgaggaag atgaatttag cattatgcag 1440 tgtccaagct cttagagatg cattttcatg tttgtcaagg aagtctttat aactagcccc 1500 ctctcctgga ttgcaaagca cgattgatgg gatccctcct ttaatttgaa ccggctttcc 1560 gtacttgcaa ttgctttgcc agtcacgctg ggacccaatt agttctttcc agtgcttcat 1620 ttttagataa tgcggagtga catcatcaat gacgttatac tccacttcat ttgaataaac 1680 tttagaatta aaatccaagt gtccacttaa ataattatgt ggtcctagtg cacgagccca 1740 catagtcttc cccgtcctag aatcaccctc aatgatgata ctaataggtc tttccggccg 1800 cgcagcggca ccccttccga aatactcatc agcccattgc tgcatctcat caggaacgtg 1860 agtaaaggaa gataattcaa atatagggac ccatggggct ggagcctttg caaatatttt 1920 ttggacatgt gattgtattt tgtccaaatg aagaacataa tctctaggtt gttcttcttt 1980 taatatattt aaggccttgg atagattttc tgcgtttaga accttcgcat aagtgtcatt 2040 ggcagtttgg cagcctcctc ttgctgatct tccatcgatc tggaaatttc caaaatcaat 2100 gaagtctccg tctttttcca tgtaggtctt gacgtcggac gagcttttag ctccctgaat 2160 gtttggatgg aaatgtgctg atcttgttgg ggataccaag tcgaagaacc gttgattctg 2220 gcatttgaat ttgccttcga attgaataag cacatggaga tgaggttccc catcttcgtg 2280 aaattctctg gttacacgaa taaatttctt gtttgttggt gttttaagtg tctgtaattg 2340 ggaaagtgtt tcctctttgg ttaatgaaca atgagggtat gtaaggaaga aattttttgc 2400 atttacagtg aaacgctttg gtggtggcat tgtagtaaat aagaagatga gacccgatag 2460 ctctccttca aacttggcga aatgaattgg ggaatgggtc tcaatatata gtagagtcca 2520 ttatagaata taattgccac gtggcggcca tccgatataa tatt 2564 //