ID JF803246; SV 1; circular; genomic DNA; STD; VRL; 2631 BP. XX AC JF803246; XX DT 10-OCT-2011 (Rel. 110, Created) DT 05-APR-2012 (Rel. 112, Last updated, Version 3) XX DE Tomato mottle leaf curl virus isolate DF[BR:PADFM:04] segment DNA-A, DE complete sequence. XX KW . XX OS Tomato mottle leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2631 RX DOI; 10.1007/s00705-011-1213-7. RX PUBMED; 22218964. RA Albuquerque L.C., Varsani A., Fernandes F.R., Pinheiro B., Martin D.P., RA de Tarso Oliveira Ferreira P., Lemos T.O., Inoue-Nagata A.K.; RT "Further characterization of tomato-infecting begomoviruses in Brazil"; RL Arch. Virol. 157(4):747-752(2012). XX RN [2] RP 1-2631 RA Albuquerque L.C., Varsani A., Pinheiro B., Fernandes F.R., Martins D.P., RA Ferreira P.T.O., Lemos T.O., Inoue-Nagata A.K.; RT ; RL Submitted (13-APR-2011) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; d55c5d42128c2823a2e80ab905e930e5. XX FH Key Location/Qualifiers FH FT source 1..2631 FT /organism="Tomato mottle leaf curl virus" FT /segment="DNA-A" FT /host="Solanum lycopersicum" FT /isolate="DF[BR:PADFM:04]" FT /mol_type="genomic DNA" FT /country="Brazil:Distrito Federal" FT /collection_date="2004" FT /clone="DFM" FT /note="acronym: TMoLCV" FT /db_xref="taxon:172394" FT CDS 207..962 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:Q8QPR1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q8QPR1" FT /protein_id="AEP82941.1" FT /translation="MPKRDAPWRSMAGTSKVSRSANFSPRGGIGSKSEKAQAWVNRPMY FT RKPRIYRMYRTPDVPKGCEGPCKVQSFEQRHDVSHTGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKVWMDDNIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVLHRFYAKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT CDS complement(959..1357) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:G4XFQ5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:G4XFQ5" FT /protein_id="AEP82942.1" FT /translation="MDSRTGEVITAHQAQNGAFIWEVPNPLYFKITNVENPIYTNTRIY FT HIQIRFNHNLRRALDLQKCFLNFQVGTTSTTASGTTYLNRFRDLVNIYLYRLGVISINN FT VIRAVRFATDKPYVNYVLEDHSIKFKVY" FT CDS complement(1104..1493) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:G4XFP6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:G4XFP6" FT /protein_id="AEP82943.1" FT /translation="MQNSSSSTPPSIKPQHRIAKKRVIRRKRIDLNCGCTIYQHIDCVG FT NGFTHRGSHHCTSGTEWRVYLGGPKSPLFQDNKRRESNIHEHKDLPHPDTVQPQPQESI FT GSPKVLPELPSRDDVNDSFWDDLFK" FT CDS complement(1435..2490) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:G4XFP4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:G4XFP4" FT /protein_id="AEP82944.1" FT /translation="MPPPKPFRVNARNYFLTYPQCSLSKEEALSQLLALNTPTNKLFIR FT VSRELHEDGQPHLHVLIQFEGKYNCKNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKTYV FT EKDGDFIDHGVFQIDGRSARGGQQSANDTYAKVLNSGSIMEALNILREEQPKDFVLQHH FT NIRSNLERIFQNAPEPWVPPFPLSSFTEVPEEMQEWADDYFGGDPAARPERPISIIIEG FT DSRTGKTMWARALGPHNYLSGHLDFNSRVCSNEAEYNVIDDVTPQYLKMKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKEFLERQENTALRNWTLHNAKFIFLN FT TPLYKTTAQDS" FT CDS complement(2040..2333) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:G4XFQ8" FT /protein_id="AEP82945.1" FT /translation="MGNLISMCSSNSRVNTTARTTDSSTSYPQPDQHISIRTFRELRAL FT QMSKPTWRKTETSLIMEFSKSTADQLEEVSNLQMTRMPRSSIQDPSWRPSIY" XX SQ Sequence 2631 BP; 662 A; 547 C; 624 G; 798 T; 0 other; accggatggc cgcgcggggt ttttttgacc cgctccgtga tgtttttttt gtcttttact 60 atgtggtcca gtcaataaat gacaaatatg accgtccaat cagaaatggt tttcaaagtc 120 taattattta aaaatacttg gtctctaagt ttggtaaagt ttataaatgg tccttcctcg 180 taatgttata ccaactttaa ttcataatgc ctaagcgtga tgccccatgg cgctcaatgg 240 cggggacctc aaaggttagc cgctctgcaa atttctctcc tcgtggagga attgggtcga 300 aatcagaaaa ggcccaggcc tgggttaaca ggcccatgta taggaagccc aggatatatc 360 ggatgtatag aactcccgat gtaccaaagg gctgtgaagg cccatgtaag gtccaatcct 420 tcgagcagcg tcatgatgtc tctcatactg ggaaggtgat gtgtatttcc gatgtcactc 480 gtggtaacgg tattacccac cgtgtgggta aacgtttttg tgtcaagtca gtgtatatat 540 taggcaaggt ctggatggat gacaacatca agttgaagaa ccacacgaat agtgtgatgt 600 tctggttagt tagggatagg agaccgtatg gcacgcccat ggattttggc caggtgttca 660 acatgtttga caacgagccc agtactgcca ccgtgaagaa cgatctccgc gatcgttacc 720 aggtcctgca caggttctat gccaaggtta caggtggaca atacgccagc aacgagcagg 780 ctattgtcaa gaggttctgg aaggtcaaca accatgtggt gtacaaccat caggaggcag 840 ggaaatacga gaaccatacg gagaacgctc tattattgta tatggcatgt actcatgcct 900 ctaatcctgt atatgctact ttaaaaattc ggatctattt ttatgattcg ataacaaatt 960 aataaacttt aaattttatt gaatgatctt ctaatacata gtttacatat ggtttatctg 1020 ttgcgaatcg aacagctcta attacattgt taattgaaat aactcctaat cgatacaaat 1080 aaatattaac taaatcccta aacctattta aataagtcgt cccagaagct gtcgttgacg 1140 tcgtcccgac ttggaagttc aggaagcact tttggagatc caatgctctc ctgaggttgt 1200 ggttgaaccg tatctggatg tggtagatcc ttgtgttcgt gtatattgga ttctctacgt 1260 ttgttatctt gaaatagagg ggatttggga cctcccagat aaacgcgcca ttctgtgcct 1320 gatgtgcagt gatgacttcc ccggtgcgtg aatccattgc cgacgcagtc gatgtgttgg 1380 tatatggtgc agccacagtt taggtctatg cgcttgcgtc gaatgaccct ctttttagct 1440 atcctgtgct gtggttttat agaggggggt gttgaggaag atgaattttg cattgtgcag 1500 tgtccagttt ctgagggctg tgttttcttg tctttcgaga aactctttat agctggcccc 1560 ctctcctgga ttacagagca cgattgaggg tatccctcct ttaatttgaa ctggctttcc 1620 gtatttgcag tttgattgcc agtccttttg ggcccctatg agctctttcc aatgcttcat 1680 ctttagatat tgcggagtga cgtcatcaat gacgttgtac tcagcttcgt ttgagcaaac 1740 cctagaattg aaatccaagt gtccactcaa atagttatgt gggcctagtg cacgagccca 1800 catcgtcttc cccgtcctcg aatcaccctc gatgattata ctaataggtc tctctggccg 1860 cgcagcggga tccccaccaa aataatcatc cgcccactct tgcatctcct ccggaacctc 1920 agtaaaggag gagaggggaa acggaggaac ccatggttcc ggagcattct gaaatatacg 1980 ttctaaatta gaacgtatgt tgtgatgttg taggacgaag tccttcggtt gctcctccct 2040 caatatattg agggcctcca tgatggatcc tgaattgagg accttggcat acgtgtcatt 2100 tgcagattgc tgacctcctc tagctgatct gccgtcgatt tggaaaactc catgatcaat 2160 gaagtctccg tctttctcca cgtaggtttt gacatctgaa gagctcttag ctccctgaat 2220 gttcggatgg aaatgtgctg atcgggttgg ggatacgagg tcgaagaatc ggttgttctt 2280 gcagttgtat ttaccctcga attggatgag cacatggaga tgaggttgcc catcttcgtg 2340 tagttctctt gagacacgaa tgaataattt attggttggg gtgtttaggg ctaataattg 2400 ggaaagtgct tcttctttgg atagagagca ctgtggataa gtgaggaaat aatttctagc 2460 atttactcta aatggcttag gcggtggcat atttgtaata atagttgggc accgattggt 2520 gtcttctcaa acttactaaa gcaattgggg actggggtct tatatatact agaaccctct 2580 atagaacttt caatctcgtt cacacacgtg gcggccatcc gatataatat t 2631 //