ID   JF781587; SV 1; linear; genomic RNA; STD; VRL; 883 BP.
XX
AC   JF781587;
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DT   01-APR-2012 (Rel. 112, Created)
DT   01-APR-2012 (Rel. 112, Last updated, Version 1)
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DE   Strawberry necrotic shock virus isolate CVIC21 coat protein gene, complete
DE   cds.
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KW   .
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OS   Strawberry necrotic shock virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
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RN   [1]
RP   1-883
RA   Sharman M., Constable F., Perera R., Thomas J.E.;
RT   "First report of Strawberry necrotic shock virus infecting strawberry
RT   (Fragaria vesca) from Australia";
RL   Australas. Plant Dis. Notes 6(1):54-56(2011).
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RN   [2]
RP   1-883
RA   Constable F., Perera R.;
RT   ;
RL   Submitted (06-APR-2011) to the INSDC.
RL   Department of Employment, Economic Development and Innovation, Queensland
RL   Government, Department of Employment, Economic Development and Innovation,
RL   Ecosciences Precinct, GPO Box 46, Brisbane, Queensland 4001, Australia
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DR   MD5; 8f4b31a1094b169c1b390e1b523b4999.
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FH   Key             Location/Qualifiers
FH
FT   source          1..883
FT                   /organism="Strawberry necrotic shock virus"
FT                   /host="Fragaria vesca"
FT                   /isolate="CVIC21"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /PCR_primers="fwd_name: SNSV CPbeg F, fwd_seq:
FT                   gagtatttctgtagtgaattcttgga, rev_name: TSVcpR4, rev_seq:
FT                   cggatgcgyggyarctatgcat"
FT                   /db_xref="taxon:243563"
FT   CDS             82..750
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H9TN32"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:H9TN32"
FT                   /protein_id="AFG22600.1"
FT                   /translation="MSVNRGKNVLNNNSNGCPTCFDKLDAAASNCARCTRNGGVTNRQR
FT                   RNARRAANFRNQRPVPVVPVSAPTTSKSLKLPGNQVWVTRKPSDWAAKTVDTNDAITLK
FT                   TIFNGIPEINDDTKIFRVLIGFVAVSDGTFGLVDEVVGDSILDPPIIGRLGFKKNTYRS
FT                   RDFRFDGKLTTQVANKAIVWCLDANRRDAKRVRLADFWVAISRPNPLMPPDEFLSGDSD
FT                   "
XX
SQ   Sequence 883 BP; 228 A; 190 C; 212 G; 253 T; 0 other;
     attatagata agctacttct tgagcctacc tgagatgtat gattactttg accaagaatc        60
     cagaccaaac catccaacgc catgtctgtt aacaggggga agaatgtttt gaataacaac       120
     tccaatggtt gcccaacttg ttttgacaag ttggatgccg ctgcgtctaa ctgcgcgagg       180
     tgtacgcgca acggtggtgt tactaaccgc cagcgtcgta atgccaggag ggccgctaac       240
     tttcgtaatc agaggcccgt gcctgttgtt ccagtttcag ctcctaccac ttcaaaatct       300
     ttgaagttac ctggtaacca ggtatgggtc actcggaaac cgagtgattg ggctgcaaaa       360
     actgttgata ccaacgatgc gatcacgttg aagaccattt ttaatggtat tcccgaaatc       420
     aatgatgaca cgaagatttt ccgtgtctta attggtttcg ttgccgtgtc cgatgggaca       480
     tttggtttgg tcgacgaagt cgttggagat tcgatccttg atccaccaat tataggtcgg       540
     ttgggattta aaaagaatac ttatcgtagc cgcgacttcc gttttgacgg gaaacttaca       600
     acacaagttg ctaataaagc aattgtgtgg tgcctcgatg ctaatcgtcg agatgctaag       660
     cgggtcagat tggcagactt ttgggtcgcc atatcacgac ctaatccgct gatgcctcca       720
     gatgagtttc tgtctgggga tagtgattga ctatctccaa tcctcgagag taatctcgag       780
     ttgcctcaca ttaaaggtaa ttcttgtgtg agatgcggat atcaccctat gtatgttgta       840
     gatcaacata tatggacgtg tgacgtatgt cgtcaacgac aat                         883
//