ID JF727878; SV 1; circular; genomic DNA; STD; VRL; 2782 BP. XX AC JF727878; XX DT 03-APR-2011 (Rel. 108, Created) DT 03-APR-2011 (Rel. 108, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate SJZ1, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2782 RA Song J., Tian P.; RT "Molecular characterization and pathogenicity of tomato yellow leaf"; RL Unpublished. XX RN [2] RP 1-2782 RA Song J., Tian P.; RT ; RL Submitted (25-MAR-2011) to the INSDC. RL School of Biology, Hebei University of Science and Technology, 70 Yuhua RL Street, Shijiazhuang, Hebei 0311, China XX DR MD5; d9f02a9f8bc3494c2ad15995ac39b2db. XX FH Key Location/Qualifiers FH FT source 1..2782 FT /organism="Tomato yellow leaf curl virus" FT /host="tomato" FT /isolate="SJZ1" FT /mol_type="genomic DNA" FT /country="China:Shijiazhuang, Hebei province" FT /isolation_source="leaf" FT /collection_date="01-Aug-2010" FT /PCR_primers="fwd_name: TJ-F, fwd_seq: FT ggaacatcagggcttcgata, rev_name: TJ-R, rev_seq: FT ccctctggaatgaaggaaca" FT /PCR_primers="fwd_name: tp-newf, fwd_seq: FT taatcatttccacgcccg, rev_name: tp-newr, rev_seq: FT tctcatacttggctgcctcc" FT /db_xref="taxon:10832" FT gene 149..499 FT /gene="AV2" FT CDS 149..499 FT /codon_start=1 FT /gene="AV2" FT /product="AV2" FT /db_xref="GOA:Q2EI17" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2EI17" FT /protein_id="AEA29711.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PEAQNIQNVSKP" FT gene 309..1085 FT /gene="AV1" FT CDS 309..1085 FT /codon_start=1 FT /gene="AV1" FT /product="AV1" FT /db_xref="GOA:F2YZM6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:F2YZM6" FT /protein_id="AEA29712.1" FT /translation="MSKRPGDIIISTPASXVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDGTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1082..1486) FT /gene="AC3" FT CDS complement(1082..1486) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /db_xref="GOA:C0KYD1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C0KYD1" FT /protein_id="AEA29713.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNNDI FT ISIQIRFNHNIRKALGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLYSLGVISINN FT VIRAVDHVLYDVLENTINVTATHDIKYKFY" FT gene complement(1227..1634) FT /gene="AC2" FT CDS complement(1227..1634) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /db_xref="GOA:A6H4V7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A6H4V7" FT /protein_id="AEA29714.1" FT /translation="MQSSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHI FT NCNNHGFTHRGTHHCSSSREWRFYLGDKQSPLFQDNRTQPEAISNEQRHHFHSDKIQPQ FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1543..2616) FT /gene="AC1" FT CDS complement(1543..2616) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /db_xref="GOA:F2YZM9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:F2YZM9" FT /protein_id="AEA29715.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNIKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDSRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDMIFNPPLEVYISPFLSSSFNQVPDELDEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDVWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNAIFVTLYEPLFA FT SINQGPTQDSQEETNKA" FT gene complement(2172..2465) FT /gene="AC4" FT CDS complement(2172..2465) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="GOA:Q17UU4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q17UU4" FT /protein_id="AEA29716.1" FT /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQTGQHISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSIADQLEEVSNLPTTHMPRHSIQAVNPRPSIY" XX SQ Sequence 2782 BP; 760 A; 532 C; 611 G; 878 T; 1 other; accggatggc cgcgcctttc tctttttatg tggtccccac gagggttcca catacgtcac 60 tgtcaaccaa tcaaatagca tcctcaaacg ttagataagt gttcatttgt ctttatatac 120 ttggtcccca agtagtctgt cttgcaatat gtgggatcca cttctaaatg aatttcccga 180 atctgttcac ggatttcgtt gtatgttagc tattaaatat ttgcagtccg ttgaggaaac 240 ttacgagccc aatacattgg gccacgattt aattagggat cttatatctg ttgtaagggc 300 ccgtgactat gtcgaagcga ccaggcgata taatcatttc cacgcccgcc tcgarggttc 360 gccgaaggct gaacttcgac agcccataca gcagccgtgc tgctgtcccc attgtccaag 420 gcacaaacaa gcgacgatca tggacgtaca ggcccatgta ccggaagccc agaatataca 480 gaatgtatcg aagccctgat gttcctcgtg gatgtgaagg cccatgtaaa gtccagtctt 540 atgagcaacg ggatgatatt aagcatactg gtattgttcg ttgtgttagt gatggtactc 600 gtggatctgg aattactcac agagtgggta agaggttctg tgttaaatcg atatattttt 660 taggtaaagt ctggatggat gaaaatatca agaagcagaa tcacactaat caggtcatgt 720 tcttcttggt tcgtgataga aggccctatg gaaacagccc aatggatttt ggacaggttt 780 ttaatatgtt cgataatgag cccagtaccg caactgtgaa gaatgatttg cgggataggt 840 ttcaagtgat gaggaaattt catgctacag ttatcggtgg gccctctgga atgaaggaac 900 aggcattagt taagagattt tttagaatta acagtcatgt aacttataat catcaggagg 960 cagccaagta tgagaaccat actgaaaacg ccttgttatt gtatatggca tgtacgcatg 1020 cctctaatcc agtgtatgca actatgaaaa tacgcatcta tttctatgat tcaatatcaa 1080 attaataaaa tttatatttt atatcatgag ttgctgttac atttattgtg ttttcaagta 1140 catcatacaa tacatgatca actgctctga ttacattgtt aattgaaatt acaccaagac 1200 tatataaata cttaagaact tgatatctaa atactcttaa gaaacgacca gtctgaggct 1260 gtaatgtcgt ccaaattcgg aagttgagaa aacatttgtg aatccccaat gccttcctga 1320 tgttgtggtt gaatcttatc tgaatggaaa tgatgtcgtt gttcattaga aatggcctct 1380 ggctgtgttc tgttatcttg aaatagaggg gattgtttat ctcccagata aaaacgccat 1440 tctctgcttg aggagcagtg atgagttccc ctgtgcgtga atccatgatt gttgcagttg 1500 atgtggaggt agtatgagca gccacagtct aggtctacac gcttacgcct tattggtttc 1560 ttcttggcta tcttgtgttg gaccttgatt gatacttgcg aacagtggct cgtagagggt 1620 gacgaagatt gcattcttga gagcccaatt tttcaaggat atgttttttt cttcgtctag 1680 atattcccta tatgaggagg taggtcctgg attgcagagg aagatagtgg gaattccccc 1740 tttaatttga atgggcttcc cgtactttgt gttgctttgc cagtccctct gggcccccat 1800 gaattccttg aagtgcttta aataatgcgg gtctacgtca tcaatgacgt tgtaccacac 1860 atcattactg tacacctttg ggcttaggtc tagatgtcca cataaataat tatgtgggcc 1920 tagagacctg gcccacattg ttttgcctgt tctgctatca ccctcaatga caatacttat 1980 gggtctccat ggccgcgcag cggaagatac gacgttctcg gcgacccact cgtcaagttc 2040 atctggaact tgattaaaag aagaagaaag aaatggagaa atataaactt ctaaaggagg 2100 attaaaaatc atatctaaat ttgaacttaa attatgaaat tgtaaaatat agtcctttgg 2160 ggccttctct tttaatatat tgagggcctc ggatttactg cctgaattga gtgcctcggc 2220 atatgcgtcg ttggcagatt gctgacctcc tctagctgat ctgctatcga tttggaaaac 2280 tccaaaatca atgaagtctc cgtctttctc cacgtaggtc ttgacatctg ttgagctctt 2340 agctgcctga atgttcggat ggaaatgtgc tgacctgttt ggggatacca ggtcgaagaa 2400 ccgttggttc ttacattggt atttgccttc gaattggata agcacatgga gatgtggttc 2460 cccattctcg tggagttctc tgcaaacttt gatgtatttt atatttgtcg gggtttctag 2520 gttttttaat tgggaaagtg cttcctcttt agagagagaa caattgggat atgttaggaa 2580 ataatttttg gcatatattt taaataaacg aggcatgttg aaatgaattg gtgtccctca 2640 aagctctatg gcaatcggtg tatcggtgtc ttacttatac ctggacacct aatggctatt 2700 tggtaatttt gtaaaagtac attgcaattc aacattcaaa attcaaaaat caaatcaata 2760 aagcggccat ccgtataata tt 2782 //