ID JF716350; SV 1; linear; genomic RNA; STD; VRL; 6215 BP. XX AC JF716350; XX DT 01-JUN-2012 (Rel. 113, Created) DT 03-JUN-2012 (Rel. 113, Last updated, Version 2) XX DE Botrytis porri RNA virus 1 strain GarlicBc-72 segment 1, complete sequence. XX KW . XX OS Botrytis porri botybirnavirus 1 OC Viruses; Riboviria; Botybirnavirus. XX RN [1] RP 1-6215 RX DOI; 10.1128/JVI.00292-12. RX PUBMED; 22496220. RA Wu M., Jin F., Zhang J., Yang L., Jiang D., Li G.; RT "Characterization of a Novel Bipartite Double-Stranded RNA Mycovirus RT Conferring Hypovirulence in the Phytopathogenic Fungus Botrytis porri"; RL J. Virol. 86(12):6605-6619(2012). XX RN [2] RP 1-6215 RA Wu M.; RT ; RL Submitted (21-MAR-2011) to the INSDC. RL Plant Protection, Huazhong Agricultural University, Lion Mountain Street, RL Hongshan District, Wuhan, Hubei 430070, China XX DR MD5; 83ce49f015d9e4cd6c43a356c43108d2. DR EuropePMC; PMC3393542; 22496220. XX FH Key Location/Qualifiers FH FT source 1..6215 FT /organism="Botrytis porri botybirnavirus 1" FT /segment="1" FT /host="Botrytis porri" FT /strain="GarlicBc-72" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="2008" FT /identified_by="Mingde Wu" FT /db_xref="taxon:1918014" FT CDS 404..6112 FT /codon_start=1 FT /product="cap-pol fusion protein" FT /note="contains an RdRp_4 superfamily domain and a capsid FT protein" FT /db_xref="GOA:I3PN87" FT /db_xref="InterPro:IPR001795" FT /db_xref="UniProtKB/TrEMBL:I3PN87" FT /protein_id="AFD04798.1" FT /translation="MKFKMPYNTQTASSAQEDNRVENVAKSAPQNINLPAELWALVSSS FT LQSYDCAVVSKCVGVSSHPLVVAMMSRAADEYKYPCPAARRVYAVPCGCKAFMRSTVGH FT LVVKKDEVGSFICCAYNGTRSCRCKSGSMSWVTTQDREEALRQDLLATYARQTKGRYGP FT NPTESEMEEKDREDRDLADWRDYLRYCAEKVVLEEDLCLKALFFSRELTVLGPKGADEP FT GSDPVPPPPSGPVLDRETVGDDTVPDQVTGPDLPVAAPTPVNPGDEAAAEQENSGNKYE FT NVLSNERSGQPVEEPEHAGWLSWLNDEDDTMFDRYAGTIMRSARHKAWEPALQGHWNNV FT FTIGGDIMRDVKAHHKTVAMSLSPHVTWGYGEGTPDATITKAGYIDSYEVVQCTTDRRT FT VMIPFARDTIAYNVPFGMSVYNRAQPFNSTASVTPLSDILSAVEDKALTSAYNSLILTS FT SSKGNNHIALGCTMYMRLMALEMLAEQGAATYIDLTAEGFNRFLLPVEDGDDAPIRKVA FT RSVVAHQPYNMITLPDQSADSDAILMYYLAGNSRITTYVTAGPGAPDLAVHSTIDLYVP FT EQRFTLCPLNGSELIEERDSDDDGAFKVDAYRARSLVSRYLTAHNLWQQFPVMRAFAWA FT LLAHPATSVNIQYPAPMHTADLQLNLFPNPASIEHRGVILGERDHQTSLHASVVTAARM FT AEEVLTDSIVSTVVEAGIEYTNPAYTGTVEQELGRHLYHGYAHLIMPIVEKLLGDTFPE FT LTQYLADSVLALEHCTTGRDLDRKKFRASSYLCMEETPEGEGWQVVFSESRRKQILQQE FT YCTEREQLTCLWLTQKVAQENVGAVTYYQHEILPSESVSDTPVVRGWLGKNRLDYLRGA FT PILWGTSTTAVAYKHSPQRVKEFQLESNELGPPTGLFAQLYEKRMQVNSEAMIREDEEA FT LGTASHREEKGWAPKLEPKREEKKEEVVRVRPTATKKTKPVRQQVPVLAVKAVPSPDKE FT GFLPVKGGARPTSVQVTRMTTMPMGKSPMKVANSTPKVRRTLSGGYKKPTPWYLRASSR FT EEEEAALKKGAEARKSFESRPLSLGRLRILLEKEQTSAEDRKEIDRYYDRGMDAALKRA FT PYTAGVMWSKRQIIAKNKTRIAHLKTAMLNGAYGKNAWMVTLGLWIMTNTMTDNCFEDL FT IKEGILKTEYSDWNSKWASYNDIIRNKWAKGEFQHTPDDLVQCLYIANMVGRPHRECDW FT DDEVKKRTRNVGEIKIARNGKMVPADESQLEEEILQMLLKEGSIRVKKPKTFEQFYSSR FT GNWMIKGSASGERMLISEYKEIVGQVKGLGVELRERATKTDVAEYVSAQAVLALLDDMA FT IHLAKAHTKGNEHGKVRAIYGSLYAHYVLGSFWSTYLEDTVTLASASMNKDNSRLIAET FT MQRAISCRSGRWIVCLDYADFNAQHSGMAQRSVIRTLYKWAKMMGFQPTEEFNRISEWY FT ADSFTNQWFQRPDNKQWVRAVSGMFSGVRQTTLINTILNLTYHHIAMKNCYNLGQKVEC FT LQTYVLGDDGWVEFSTKEEAEMYVVAARMGGMEINAIKQLIGQGKGEYLRLIYDVDGRV FT RGCPVRSLASFVHGNVENKQASVGQQRITEMYSQACMLVRRGLDPARWQKVFEDLAIYE FT IGYTTQVSRGQCLKYLYGSKRSGGLGLMPLNTATDRVAKLPVEAEEAAEEVDVAQILAD FT SLVEGRVANKFKASSDYVGTLEREYGVVWKHNGKIKATAQVAASNLVEGITNVGAEHEV FT LKMRVLGAQLEKAKWLEAMNWDRWNNGPLIGPENIEKQYRKIRVSEDKLLSTVTKVAKL FT AHLMSAESVEAVQMKIAADLDVSVTAVKHSFKSASVLRGEQIDYIPKPVMAPELEGIYT FT QWLTVNNNDSQQMSIPRWIADYTAVLRY" XX SQ Sequence 6215 BP; 1831 A; 1363 C; 1782 G; 1239 T; 0 other; gcaaataaaa gagctgcctt ttgaagcctt ttatttgtaa ggaaaattta tattgatcgt 60 cattcaacga tccccgctcg ggttagaaag caccacaagc gcagtgacga tcgcttgtga 120 gtagtagtca cactagatgg taaattctat ttggaacctc ggacactctc aaaccgcctt 180 gtcaggatat cagcggatgt gaatagacgt gtggaacaca acgtgcccac cacatcttca 240 actgctcctg ttagtgtata aatcagaagg ataggtaaac cgagatctct agagaagagg 300 ctacctggca ctgctgacgg gccgtagtat actacgatat cgggaggaat tgaagccttc 360 tgtaatcccc cagtacccag gctctctagg gtaaagtgag agaatgaaat tcaaaatgcc 420 ttacaacaca caaaccgcct cctcggcgca agaggacaac agagtggaga atgttgctaa 480 atcagctcca caaaacataa acttgcctgc agaattgtgg gccttggtgt cgagcagttt 540 gcagtcgtac gactgtgctg tggtgtcgaa gtgcgtcgga gtgagctccc accccttggt 600 ggttgccatg atgtcgagag cagctgacga gtacaagtac ccgtgtcctg ctgctcgaag 660 agtgtacgca gtgccctgtg gttgcaaggc attcatgagg tcgacggtag gacacctcgt 720 agtaaagaag gatgaggttg ggagcttcat ctgctgtgcc tacaacggca cgagatcgtg 780 tcgctgcaag agcggctcca tgtcgtgggt cacaacccaa gacagagaag aagcgttaag 840 gcaggatttg ttggccactt atgctcggca gacgaagggc aggtacggac caaacccaac 900 tgagtcagag atggaggaga aagacagaga agatagggat ctagccgact ggagagatta 960 cctgagatac tgcgctgaga aggtggtatt agaagaagat ctctgcctta aggcgctctt 1020 tttctcaaga gagctgaccg tgttaggacc taagggtgct gacgagccag gctctgaccc 1080 tgtaccacca cctccttcag gaccggtgct ggacagggag actgtgggag acgacactgt 1140 cccagaccaa gttactgggc cggatctccc agtagctgcc cccaccccag ttaaccccgg 1200 tgatgaggct gcggctgaac aagaaaactc tgggaataag tacgagaatg tgcttagtaa 1260 cgagagatct gggcagcctg tcgaagaacc ggagcatgct gggtggttgt cgtggttaaa 1320 cgacgaagac gacactatgt ttgacaggta cgcaggtact atcatgcgta gtgctagaca 1380 caaagcgtgg gaaccagcgc tacaagggca ctggaacaac gttttcacga taggtggtga 1440 tataatgaga gatgttaaag cacaccacaa aacagtggct atgagcttgt ctccacacgt 1500 gacctggggt tacggtgagg gcacacccga cgccactatc acaaaagctg ggtatatcga 1560 tagttacgag gtcgtgcagt gcaccaccga caggagaact gtcatgatcc cgtttgcgcg 1620 cgacaccatc gcgtacaacg tgccttttgg catgagcgtg tacaaccgcg ctcaaccttt 1680 caattctaca gccagcgtaa caccgctgtc tgacattttg tcagctgtag aagataaggc 1740 gcttacgtcg gcatacaaca gcttgatact gacctcatca agcaaaggaa acaatcacat 1800 cgcgcttgga tgcacgatgt acatgaggtt gatggcattg gagatgctag ctgaacaagg 1860 agcagcgaca tacattgact tgacagcaga aggattcaac cgattcctcc tacctgtcga 1920 ggatggagat gacgcaccaa tccgcaaagt ggcgagatca gttgtggcac accaacctta 1980 caacatgatc acgctacctg accaatcagc agacagcgat gcgatattga tgtactatct 2040 cgctggtaat tctaggatta ctacttatgt cacagctggc cctggagcgc cagatttggc 2100 cgtgcactcg acaattgatt tgtacgtacc agagcagcgt ttcacattgt gcccgctgaa 2160 cggcagtgag cttatagaag agcgagatag cgatgacgac ggtgctttca aggtagatgc 2220 atacagagcg agatcgctgg tgagcaggta cctgaccgcg cacaatttgt ggcagcagtt 2280 cccagttatg cgagcattcg cgtgggcatt gctagctcac cctgcgacat ctgttaacat 2340 tcagtaccca gcaccgatgc acacagctga tttgcagctg aatttgttcc caaatccagc 2400 ttcaattgag cacagggggg tgatacttgg agaacgagac caccaaactt ccctccacgc 2460 gtctgtggta acagcagcgc ggatggcaga ggaagtgcta acggattcca tcgtgtctac 2520 cgttgtagag gcaggtattg agtacactaa tccagcgtac actggtactg tagaacaaga 2580 gctgggcagg cacttgtacc atgggtacgc tcatctgata atgccgattg tcgaaaagct 2640 gctcggagat accttccccg agctcacaca atacttggct gactcggtac tagcacttga 2700 gcactgcaca actggccgcg atctagaccg taaaaagttt cgagctagca gttacttgtg 2760 tatggaagaa acaccggaag gtgagggatg gcaagttgtt ttttcagaga gcaggaggaa 2820 gcaaatcctc cagcaagagt actgcactga gcgtgaacag ttgacctgtc tctggctgac 2880 gcagaaagta gcgcaggaga acgtaggggc agtgacttac taccagcacg aaatactacc 2940 ctccgaatcc gtctcagaca ctcctgttgt gagagggtgg ttgggcaaga acaggttaga 3000 ttacctacgc ggagccccaa tcttgtgggg aacgtccaca acagcagtgg cctacaaaca 3060 ctcgccgcag cgagtgaagg aattccagct cgaaagcaat gagctaggtc caccaacagg 3120 gctgtttgca cagttgtacg aaaagaggat gcaggtgaat agcgaggcga tgatccgaga 3180 ggatgaagaa gcacttggca ccgcatcaca tagagaagag aaaggctggg cacctaagct 3240 cgagcctaaa agagaagaga agaaggagga ggtggtcaga gtcagaccta ctgctacgaa 3300 gaagacgaag cctgtaagac aacaggtgcc agtcctagcc gtaaaggcag taccaagtcc 3360 tgacaaagaa gggttcctac cggtaaaagg tggagcccgt ccaacgtcag tgcaagtgac 3420 gaggatgacg accatgccaa tgggcaaatc accaatgaaa gttgcgaaca gcacaccaaa 3480 agtgaggcgc acgttgagcg gaggctataa gaagccaact ccgtggtatc ttagagcctc 3540 gagtcgcgaa gaagaggaag ctgcgcttaa aaaaggcgca gaagcaagga agagtttcga 3600 gtccaggcca ttaagcttag gacggctcag aatcttgctg gagaaagagc agacctcggc 3660 tgaagacagg aaagagatcg atcgctacta cgacagaggt atggacgcgg cactcaaacg 3720 cgccccctac acagcaggag ttatgtggtc gaaaaggcag atcattgcaa agaacaaaac 3780 acgcatcgca caccttaaga cagcgatgct gaacggcgca tacgggaaga acgcttggat 3840 ggtgaccctt ggattgtgga ttatgacgaa caccatgacc gacaactgtt ttgaagatct 3900 gatcaaagaa gggatcttga agaccgaata ctcagattgg aacagcaagt gggcatcgta 3960 caacgacatt atccgcaaca agtgggcgaa aggtgagttt caacacacac ccgatgacct 4020 ggtacaatgc ctgtacatcg caaacatggt agggagaccg catcgagagt gtgattggga 4080 tgatgaggtc aagaagagaa cgagaaacgt aggagagatc aaaatagcaa gaaacgggaa 4140 gatggtgccg gcagacgaga gtcagctgga ggaggagata cttcagatgc tgctcaaaga 4200 gggaagtatc agagtcaaaa aaccgaagac gtttgagcag ttctacagca gcagagggaa 4260 ctggatgatc aagggttcag catcaggtga gaggatgctg atatcagaat acaaggagat 4320 cgtcggccaa gtcaaaggac taggtgtaga gctgagagag cgagcgacaa aaacagatgt 4380 tgctgagtac gtgtcagccc aagcagtgtt agcactgcta gacgacatgg ccatacactt 4440 ggccaaagcg cacacaaaag gtaacgagca cgggaaagtg agagctatct acggttcgtt 4500 atacgcgcat tacgtactcg gcagtttctg gagcacgtac ttggaagata cggtgacatt 4560 agcaagcgct agcatgaaca aggacaacag taggctgata gccgaaacaa tgcaaagagc 4620 gatatcgtgt cggtcgggtc ggtggatcgt ctgtctagat tacgccgatt tcaatgcaca 4680 gcactcaggt atggcacagc gcagcgtgat acgcacgctg tacaagtggg cgaagatgat 4740 gggctttcag cctaccgagg agttcaaccg gatatccgag tggtatgctg acagttttac 4800 caaccagtgg ttccaacgcc ccgacaacaa acaatgggtg cgagcagtat ccggtatgtt 4860 ttcgggagtg cgacagacga cgctaatcaa cacaattcta aacctcacgt accaccacat 4920 agcaatgaag aattgctaca acctcggaca gaaggtcgag tgcttgcaga cgtacgtact 4980 gggtgacgac ggatgggtag agttcagcac gaaggaagaa gcagaaatgt acgtagtagc 5040 agccagaatg ggagggatgg aaatcaacgc catcaaacag cttattggac aagggaaagg 5100 tgagtacctt agattgattt acgacgtgga tggcagagtg agagggtgtc ctgtgcgatc 5160 gctagcgagt tttgtccatg gtaacgtgga gaataaacaa gcctcagtag gtcagcagag 5220 gataactgaa atgtactcgc aagcttgtat gctggtgagg agaggattgg atccagcgag 5280 atggcagaaa gtgttcgaag atcttgcgat atacgagata gggtacacaa cccaggtgtc 5340 tcgaggacaa tgcctgaagt acctgtatgg aagcaaaaga agcggtggct taggtttgat 5400 gcctttaaac accgctaccg atagagtagc gaagctgcct gtggaagcgg aagaagcagc 5460 tgaggaggtg gatgtagcac agatactagc ggacagcttg gtggaaggga gagtggctaa 5520 caagttcaaa gcctccagcg actacgtcgg cacgttagag agagaatacg gtgtggtttg 5580 gaagcacaac gggaagatca aggctacggc gcaagtcgca gcatctaacc tggtggaagg 5640 gataacgaac gtcggagcgg agcacgaggt gcttaaaatg cgagtgctgg gagcacagtt 5700 ggagaaagcg aagtggttag aagcgatgaa ctgggacagg tggaacaatg gtccactgat 5760 agggcctgag aacatcgaga aacagtacag gaagataaga gtcagcgagg ataagttgct 5820 aagtacagtg acgaaagtgg caaagctggc acacctgatg agcgcggaga gtgtagaagc 5880 agtccagatg aagatagcgg ctgatctaga tgtgagtgtg acagcagtga agcactcgtt 5940 taagtccgca agcgtgctaa gaggagagca gatagattat ataccaaaac cggtgatggc 6000 accggagttg gagggtatat acacacagtg gttgactgtg aacaacaacg atagtcagca 6060 gatgtccatc cctagatgga tagcagacta cacagcagta ttacggtact aggtgtggaa 6120 aacgttgtgt gaaagagctt acaacatgca gttggtaagt atatagggtg attagggtta 6180 accccataat ttacagggag aagtgaatag atagc 6215 //