ID   JF699626; SV 1; linear; genomic RNA; STD; VRL; 939 BP.
XX
AC   JF699626;
XX
DT   31-MAR-2013 (Rel. 116, Created)
DT   24-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Sweet potato virus C isolate HN:2C:08 coat protein gene, partial cds.
XX
KW   .
XX
OS   Sweet potato virus C
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-939
RX   DOI; .1094/PDIS-03-12-0268-RE.
RX   PUBMED; 30727310.
RA   Kashif N., Pietila S., Artola K., Jones R.A.C., Tugume A.K., Makinen V.,
RA   Valkonen J.P.T.;
RT   "Detection of Viruses in Sweetpotato from Honduras and Guatemala Augmented
RT   by Deep-Sequencing of Small-RNAs";
RL   Plant Dis. 96(10):1430-1437(2012).
XX
RN   [2]
RP   1-939
RA   Muhammad K., Tugume A.K., Valkonen J.P.T.;
RT   "Detection and characterization of viruses in sweet potatoes (Ipomoea
RT   batatas L.) from Guatemala and Honduras";
RL   Unpublished.
XX
RN   [3]
RP   1-939
RA   Muhammad K., Tugume A.K., Valkonen J.P.T.;
RT   ;
RL   Submitted (16-MAR-2011) to the INSDC.
RL   Department of Agricultural Science, University of Helsinki,
RL   Latokartanonkaari 7, Helsinki FIN-00014, Finland
XX
DR   MD5; e01e6c84686be208f41d39293225259a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..939
FT                   /organism="Sweet potato virus C"
FT                   /host="Ipomoea batatas"
FT                   /isolate="HN:2C:08"
FT                   /mol_type="genomic RNA"
FT                   /country="Honduras:Copan"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:930881"
FT   CDS             <1..>939
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="capsid protein"
FT                   /db_xref="GOA:M4GPF6"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:M4GPF6"
FT                   /protein_id="AFD22453.1"
FT                   /translation="SGNPSEFKDAGANPPAPKPKGPYTAPEITEITEPEDPKQAALREA
FT                   RQKQPAVTPESYGRDTGEKPMRSVSPQRVKDKDVNVGTTGTFLVPRVKLHTSKMRQPRV
FT                   NGISVVNLQHLATYEPEQHNIGNTRSTQEQFQAWYEGVKGDYGVDDAGMAILLNGLMVW
FT                   CIENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVRTFRQIMTHFSDVAEAYIEMRNRT
FT                   KAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPTRAKEAHMQMKAAALKNAHNRLFGLD
FT                   GNVSTQEEDTERHTATDVTRNIHNLLGMRGVH"
XX
SQ   Sequence 939 BP; 304 A; 196 C; 224 G; 215 T; 0 other;
     tctggcaacc cctctgaatt taaagatgca ggtgcgaacc caccagcacc aaagccaaaa        60
     gggccgtata cagcaccaga aatcacagaa attactgagc ccgaggatcc caaacaagct       120
     gcgcttcgtg aagctagaca gaaacaacct gctgtcacac ccgaatcata cggtagagat       180
     acaggtgaga aacctatgcg ctctgtttca ccacaaaggg taaaagacaa ggatgtcaat       240
     gttggtacga caggtacatt tttagtacca cgagttaagc ttcatactag taaaatgcgc       300
     caaccgagag tcaatggaat ctctgtagta aacttacagc accttgcaac ctacgaacct       360
     gagcaacata acattgggaa tacacgctca acccaggaac agtttcaggc atggtatgaa       420
     ggtgtcaagg gtgattatgg tgttgatgac gctggaatgg caatcttgtt gaatggactg       480
     atggtatggt gcattgagaa tggaacatct ccaaatataa atggcgtttg gacgatgatg       540
     gatggggatg aacaagtgac gtatcccata aagccattac tggatcatgc agtgcgtact       600
     tttaggcaaa tcatgacaca cttcagtgac gttgctgaag cgtatataga aatgagaaat       660
     cgcaccaagg catatatgcc taggtatgga ttacaacgta atttgactga tatgagtctt       720
     gcgcgatacg catttgattt ctatgagctg cattcaacaa cacctacacg tgctaaagaa       780
     gcacacatgc agatgaaagc agctgcactt aagaatgcgc ataatcggtt gttcggttta       840
     gatggaaacg tctccacgca agaagaggat acggagaggc acactgcgac tgatgttact       900
     agaaatatac ataacctctt aggaatgagg ggtgtgcac                              939
//