Dbfetch
ID JF694488; SV 1; circular; genomic DNA; STD; VRL; 2589 BP. XX AC JF694488; XX DT 02-JAN-2012 (Rel. 111, Created) DT 02-JAN-2012 (Rel. 111, Last updated, Version 1) XX DE Tomato golden mosaic virus isolate csTGMV[92/11] segment DNA-A, complete DE sequence. XX KW . XX OS Tomato golden mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2589 RA Wyant P.S., Kober S., Jeske H., Wege C.; RT "Tomato golden mosaic virus back in tomatoes"; RL Unpublished. XX RN [2] RP 1-2589 RA Wyant P.S., Kober S., Jeske H., Wege C.; RT ; RL Submitted (15-MAR-2011) to the INSDC. RL Molecular Biology and Plant Virology, University of Stuttgart, RL Pfaffenwaldring 57, Stuttgart, Baden-Wurttenberg 70550, Germany XX DR MD5; 85c831434543295785adb345f7d36983. DR EuropePMC; PMC5904752; 29530481. DR EuropePMC; PMC6344024; 30673741. XX FH Key Location/Qualifiers FH FT source 1..2589 FT /organism="Tomato golden mosaic virus" FT /segment="DNA-A" FT /host="Solanum lycopersicum" FT /isolate="csTGMV[92/11]" FT /mol_type="genomic DNA" FT /country="Brazil" FT /db_xref="taxon:10831" FT gene 190..936 FT /gene="AV1" FT CDS 190..933 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:G9CM37" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:G9CM37" FT /protein_id="AEI91442.1" FT /translation="MPKRDAPWRLMAGTSKVTRSANYSPRGSLPKRDAWVNRPMYRKPR FT IYRSLRGPDVPKGCEGPCKVQSYEQRHDISLVGKVMCISDVTRGNGITHRVGKRFCVKS FT VYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDL FT RDRFQVMHRFHAKVTGGQYASNEQALVRRFWKVNNNVVYNHQEAGKYENHTENALLLYM FT ACTHASNPVYATLKIRIYFYDSITN" FT gene complement(930..1328) FT /gene="AC3" FT CDS complement(930..1328) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:G9CM38" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:G9CM38" FT /protein_id="AEI91445.1" FT /translation="MDSRTGEPITVPQAENGVYIWEITNPLYFKIISVEDPLYTNTRIY FT HVQIRFNHNLKRALDLHKAFLNFQVWTTSTTASGRTYLNRFKYLVMLYLEQLGVICINN FT VIRAVRFATDRLYITHVLENHSIKYKFY" FT gene complement(1075..1464) FT /gene="AC2" FT CDS complement(1075..1464) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional regulator" FT /db_xref="GOA:G9CM39" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:G9CM39" FT /protein_id="AEI91444.1" FT /translation="MRNSSSSTPPSIKAQHRAAKRRAIRRRRIDLNCGCSIYIHIDCRN FT NGFTHRGTYHCASSGEWRLYLGDNKSPLFQDNQRRGSPLHQHQDIPRTNQVQPQPEESI FT GSPQGISQLPSMDDIDDSFWENLFK" FT gene complement(1406..2464) FT /gene="AC1" FT CDS complement(1406..2464) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:G9CM40" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:G9CM40" FT /protein_id="AEI91443.1" FT /translation="MPSHPKRFQINAKNYFLTYPQCSLSKEEALSQLQALNTPTNKKFI FT KICRELHEDGQPHLHVLIQFEGKYCCQNQRFFDLVSPTRSAHFHPNIQRAKSSSDVKKY FT IDKDGDTLVWGEFQVDGRSARGGCQTSNDAAAEALNASSKEEALQIIREKIPEKYLFQF FT HNLNSNLDRIFAKTPEPWLPPFHVSSFTNVPDEMRQWAENYFGRSSAARPERPISIIIE FT GDSRTGKTMWARSLGPHNYLSGHLDLNSRVYSNKVEYNVIDDVTPQYLKLKHWKELIGA FT QRDWQTNCKYGKPVQIKGGIPSIVLCNPGEGASYKVFLDKEENIPLKNWTFHNAKFVFL FT NSPLYQSSTQSS" FT gene complement(2047..2310) FT /gene="AC4" FT CDS complement(2047..2310) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:G9CM41" FT /protein_id="AEI91446.1" FT /translation="MKMGNLTSTCLFSSRENTAAKINDSSTWYPQQGQHISIQTFRELN FT RLPTSRSTSTKTEILLYGENSRSTVEVLEEVAKHLTTLQQRR" XX SQ Sequence 2589 BP; 673 A; 520 C; 608 G; 788 T; 0 other; accggatggc cgcgcgatcg tcacccgacc cgcttccgca aattgcgccg cattgtcgta 60 taagtggtcc cgcatatgtg aagggccaac catatttggc cctgaaatct aagatatttt 120 taaggacttg tggtccaagt tgttaaagta atataaaacg acatgcgtta cgtggctctt 180 taattcaaaa tgcctaagcg ggatgcccca tggcgtttaa tggcggggac ctcaaaggtt 240 acccgctctg ctaattattc tcctcgagga agtttgccta agcgtgatgc ttgggttaac 300 aggcccatgt acaggaagcc caggatatat cgatcactga gaggccctga tgttcctaaa 360 ggatgtgaag ggccttgtaa agtccagtca tacgagcagc gtcatgatat ttccctagtt 420 gggaaggtca tgtgtatatc tgatgtgaca cgtggtaacg gtattaccca ccgtgttggt 480 aagcgtttct gcgtcaagtc tgtatatatc ttgggcaaga tatggatgga tgagaacatc 540 aagttgaaga accacacgaa cagtgtcatg ttctggttgg ttagggatcg gagaccttat 600 ggcactccta tggatttcgg acaagtgttc aacatgttcg ataatgagcc aagtactgca 660 acggtaaaga acgacctacg ggatcgtttc caagtgatgc acaggtttca cgccaaggtt 720 actggtggtc aatatgccag caacgagcag gctctggtta ggagattctg gaaagtcaat 780 aacaatgtcg tctacaacca ccaggaggca gggaaatatg aaaatcatac tgagaacgcc 840 ctgttattgt atatggcatg tactcatgcc tctaaccctg tgtatgcgac gttgaaaatt 900 cgaatctatt tttatgattc gataacaaat taataaaatt tatattttat tgaatgattt 960 tcgagtacat gcgttatata taatctgtct gttgcgaaac gaacagctct aataacattg 1020 ttaatacata taacgcctaa ctgttcaagg tacaacatca ctaagtattt aaatctattt 1080 aaataagttc tcccagaagc tgtcgtcgat gtcgtccata cttggaagtt gagaaatgcc 1140 ttgtggagat ccaatgctct cttcaggttg tggttgaacc tgatttgtac gtggtatatc 1200 ctggtgttgg tgtagagggg atcctctacg ctgattatct tgaaatagag gggatttgtt 1260 atctcccaga tatagacgcc attctccgct tgaggcacag tgataggttc cccggtgcgt 1320 gaatccattg tttctgcagt cgatgtgaat gtatatggaa cagccacagt tcaggtcaat 1380 tcgtcgcctt ctaatagctc ttcgtttagc tgctctgtgt tgagctttga tagagggggg 1440 agttgaggaa gacgaatttc gcattatgga aagtccagtt ctttagtgga atgttttcct 1500 ctttgtcgag gaaaacttta tagctagcac cctcaccagg attgcacagc acgattgacg 1560 ggatacctcc tttaatttga actggctttc cgtacttaca gttggtctgc cagtctcttt 1620 gggccccaat gagttctttc caatgtttca actttagata ttgcggtgtg acgtcatcaa 1680 tgacgttata ctcaaccttg tttgagtaaa ctctagaatt gagatccaaa tgaccgctca 1740 aataattatg tgggcctagt gaacgagccc acatagtctt tcccgtccga ctatcaccct 1800 cgatgataat actaataggt ctctccggcc gcgcagcgga actccttcca aaataatttt 1860 cagcccactg tctcatctcg tctggcacgt tagtaaatga tgagacgtgg aacggaggaa 1920 gccatggttc cggagtctta gcaaatatcc tatctaaatt gctatttaga ttgtggaact 1980 gaaataaata tttttctggg attttctctc taattatctg cagggcttct tctttggaag 2040 aagcatttaa cgcctctgct gcagcgtcgt tagatgtttg gcaacctcct ctagcacttc 2100 gaccgtcgac ctggaattct ccccatacaa gagtatctcc gtctttgtcg atgtacttct 2160 tgacgtcgga agacgattta gctctctgaa tgtttggatg gaaatgtgct gaccttgttg 2220 gggataccag gtcgaagaat cgttgatttt ggcagcagta ttttccctcg aactgaataa 2280 gcacgtggag gtgaggttgc ccatcttcat gaagctctct gcagattttt atgaattttt 2340 tgttagtcgg agtgtttagg gcttgtaatt gagaaagtgc ttcttctttg gacaaggagc 2400 actgaggata tgtaagaaaa taatttttgg catttatttg aaaccgtttt ggatgcgatg 2460 gcatttttgt aattaagagg cttactacca attgaggagg ggctccaaaa gttatatgaa 2520 ttggtagtaa ggtagctctt atatattaga agttcctaag gggcacgtgg cggccatccg 2580 tttaatatt 2589 //