ID JF694473; SV 1; circular; genomic DNA; STD; VRL; 2614 BP. XX AC JF694473; XX DT 02-JAN-2012 (Rel. 111, Created) DT 25-MAR-2012 (Rel. 112, Last updated, Version 2) XX DE Sida mosaic Alagoas virus isolate BgV02B.1.C34 segment DNA-B, complete DE sequence. XX KW . XX OS Sida mosaic Alagoas virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2614 RX DOI; 10.1016/j.virol.2012.02.007. RX PUBMED; 22397740. RA Wyant P.S., Strohmeier S., Schafer B., Krenz B., Assuncao I.P., Lima G.S., RA Jeske H.; RT "Circular DNA genomics (circomics) exemplified for geminiviruses in bean RT crops and weeds of northeastern Brazil"; RL Virology 427(2):151-157(2012). XX RN [2] RP 1-2614 RA Wyant P.S., Strohmeier S., Schaefer B., Krenz B., Assuncao I.P., RA Lima G.S.A., Jeske H.; RT ; RL Submitted (15-MAR-2011) to the INSDC. RL Molecular Biology and Plant Virology, University of Stuttgart, RL Pfaffenwaldring 57, Stuttgart, Baden-Wurttenberg 70550, Germany XX DR MD5; f9dfc5087b7131228ba48282f7d38c73. XX FH Key Location/Qualifiers FH FT source 1..2614 FT /organism="Sida mosaic Alagoas virus" FT /segment="DNA-B" FT /host="Sida sp." FT /isolate="BgV02B.1.C34" FT /mol_type="genomic DNA" FT /country="Brazil" FT /db_xref="taxon:1046571" FT gene 527..1297 FT /gene="BV1" FT CDS 527..1297 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /db_xref="GOA:G9CLY9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:G9CLY9" FT /protein_id="AEI91394.1" FT /translation="MYAAKFRRGQSSNYRRNYKRKNVFKTVYGVKRYDGKRGFNIQNKA FT HDDSKMSAQRIHENQFGPEFVMAHNTAISTFITFPSLCKTEPNRSRSYIKLKRLRFKGT FT VKIERVHTDVIMDGSSPKTEGVFSLVVVVDRKPHLGPSGCLHTFDELFGARIHSHGNLA FT ITPSLKDRFYIRHVHKRVLSVEKDTLMVDIEGTTSLSNRRFNCWSSFKDVDRDSCNGVY FT ANISKNALLVYYCWMSDSSSKASTFVSYDLDYIG" FT gene complement(1362..2243) FT /gene="BC1" FT CDS complement(1362..2243) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:G9CLZ0" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:G9CLZ0" FT /protein_id="AEI91395.1" FT /translation="MESQLVNPPNAFNYIESQRDEYQLSHDLTEIVLQFPSAAAQISAR FT LSRSCMKIDHCVIEYRQQVPINAAGSVIVEIHDKRMTENESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTDRDIDFCHVGYGKWERKLIRSTSTTTHGLPSPLSIDPGETWAAKSTIGIGQSSAD FT SEIENAALPYRGLHRLGTSLLDPGDSASIVAARRTESHITMSEAQLNDLVRTAVQECIK FT TNCIAPQPKPLN" XX SQ Sequence 2614 BP; 658 A; 538 C; 619 G; 799 T; 0 other; accggatggc cgcgcgattt tcccccccct acgtggcgct ctggtgcccg ctcgattccc 60 tcccccccct acgtggcgct ctggtgcccg ctcgattccc tccccctctc acgtgtcgct 120 ctgttctcgc gcgtgtcatt aaactgtttt taacaattta gcgctttttt ggagtccgcg 180 aattgagcta agcgcatttt ttgagttccg gaacggtaca accataataa atgctttaat 240 tcaaattaaa gttgtctgac cccttttcgt caaatcagtt cgcgctcgtt gtacttcatt 300 gtttttctcg cgatttgttc tagaccgttt gataacatta ttgtgcaata ctttattgca 360 tcattgaagc agtattgagt ggtgcgagaa aaatatagac ccacattact acatgttcta 420 cgtggaccag ttaagtgtgt tgtatgcatg tatgttaatt taggaattgt atatttaaag 480 tatgtgggtc ttgagtagga tatctcgttc gaccgactaa tttaatatgt atgcagccaa 540 gtttagacgt ggtcaatcta gtaattaccg tcgtaattac aaaaggaaga acgtctttaa 600 gactgtttat ggtgttaagc ggtacgatgg gaaacgtgga tttaatattc agaacaaggc 660 ccatgatgat agtaagatgt cggcccagcg tattcacgag aaccagtttg ggccagagtt 720 tgtaatggcc cacaacacag ccatttcaac gttcatcaca tttccaagcc tatgtaagac 780 ggagccgaac cgaagcaggt cctatattaa gttgaaacga cttcgtttta agggtactgt 840 caagattgaa cgggttcaca ctgacgtcat tatggatgga tcaagcccaa aaaccgaagg 900 agtattttca ttggtcgttg tggtggaccg gaaacctcat ttgggtccat ctggatgtct 960 ccatacgttt gatgagctct ttggggccag gatccacagt catggtaatt tagccataac 1020 cccgtccctt aaagaccgtt tctatatacg acatgtgcac aaacgtgttc tgtctgtgga 1080 gaaggacacc ctaatggttg atattgaagg gacgacatca ctctctaaca ggcgttttaa 1140 ctgttggtcc tcttttaagg atgtagaccg ggattcatgt aacggtgttt atgcaaacat 1200 aagcaagaac gccctgttag tttattactg ttggatgtct gactcttcgt ccaaggcatc 1260 gacatttgta tcatatgatc ttgactatat tggttaatga taatattgtt ttacaataca 1320 tgataatggc tctttgagcc ttaattaaca taataatgga tttaatttaa aggtttgggc 1380 tggggagcta tacaatttgt cttgatacat tcctggaccg cagtcctgac taggtcgttt 1440 aattgggcct ctgacatggt gatatgcgat tctgtccttc ttgcagcaac aattgaggct 1500 gagtctcctg ggtctaacaa gctggtcccc agtctgtgta ggcctcgata tgggagtgct 1560 gcgttctcta tttcagaatc ggcactggat tgtccgatcc ctatggtact ctttgcagcc 1620 caggtctctc ctggatcaat ggatagtggg ctaggaagcc catgtgttgt tgttgaggtg 1680 gatcggatca atttcctttc ccatttgcca tagcccacat ggcagaagtc gatatctctg 1740 tctgtaaact gtttagacaa tattttgact gtcggtgctc ggaaaggaat atccacggaa 1800 tgtttcgccg ttgaaagctt cagctttccc ttgaacttcg cgaagtgggt cctctgatga 1860 acatttgtgt cgctgaccct gtagtacagc ttccaaggga ttgggtcctt cagggagaag 1920 aaggacgagg agaaatagtg gagatctatg ttacatctga tcggaaaagt ccacgacgcc 1980 tgtaaggatt cgttttcagt cattctcttg tcgtggatct ccactatgac ggaacctgcg 2040 gcgtttatcg gtacttgttg tctgtattcg atgacgcaat ggtcgatctt catacagcta 2100 cgactgagcc tggcacttat ctgagccgcc gcagaaggaa actgtagtac gatctcagtt 2160 aggtcatgag aaagttgata ctcgtcacgc tgagactcta tataattaaa tgcatttggc 2220 ggattaacta actgagattc catttgaact aattaatctg aaagagaagg ccgcgcagcg 2280 gaatgttcaa gtgatttgaa aaggcgatta tcgaacgggg aagacgatct gagttagggt 2340 ttcgtcagtt tctggacgga ttaagaggag atatgagatg aaatgggtgt tatctacagg 2400 agtgtagagg tgttgtttga gtctatactt actgggctgg gagtaattat atagcccata 2460 aaaagagtgg cattcttgta aataaggctg gacaccaatt ggagtctctc aactcttttg 2520 ctatgcaatc ggtgtctgga gtctcattta tagtagaacc ctcaatagaa ctttagatcc 2580 tgttcgcaca cctggcggcc atccgtataa tatt 2614 //