ID JF694472; SV 1; circular; genomic DNA; STD; VRL; 2676 BP. XX AC JF694472; XX DT 02-JAN-2012 (Rel. 111, Created) DT 25-MAR-2012 (Rel. 112, Last updated, Version 2) XX DE Sida mosaic Alagoas virus isolate BgV02A.1.C61 segment DNA-A, complete DE sequence. XX KW . XX OS Sida mosaic Alagoas virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2676 RX DOI; 10.1016/j.virol.2012.02.007. RX PUBMED; 22397740. RA Wyant P.S., Strohmeier S., Schafer B., Krenz B., Assuncao I.P., Lima G.S., RA Jeske H.; RT "Circular DNA genomics (circomics) exemplified for geminiviruses in bean RT crops and weeds of northeastern Brazil"; RL Virology 427(2):151-157(2012). XX RN [2] RP 1-2676 RA Wyant P.S., Strohmeier S., Schaefer B., Krenz B., Assuncao I.P., RA Lima G.S.A., Jeske H.; RT ; RL Submitted (15-MAR-2011) to the INSDC. RL Molecular Biology and Plant Virology, University of Stuttgart, RL Pfaffenwaldring 57, Stuttgart, Baden-Wurttenberg 70550, Germany XX DR MD5; dd19ddc8ee87599a6ad93cfd30bfaa70. XX FH Key Location/Qualifiers FH FT source 1..2676 FT /organism="Sida mosaic Alagoas virus" FT /segment="DNA-A" FT /host="Sida sp." FT /isolate="BgV02A.1.C61" FT /mol_type="genomic DNA" FT /country="Brazil" FT /db_xref="taxon:1046571" FT gene 251..1006 FT /gene="AV1" FT CDS 251..1006 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:G9CLY4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:G9CLY4" FT /protein_id="AEI91389.1" FT /translation="MPKRDAPWRLMAGTSKVSRSSNTGPRGGSGPKFNKANEWVNRPMY FT RKPRIYRAFRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSCMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(1003..1401) FT /gene="AC3" FT CDS complement(1003..1401) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:G9CLY0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:G9CLY0" FT /protein_id="AEI91392.1" FT /translation="MDSRTGEHITAHQAENGVYIWEITNPLYFKIYRVEDLLYTTTRVY FT HVQIRFNHNLRRALGLHKAFLNFQVWTTSLTASGTTYLTRFRHLVMLYLEQLGVIALNN FT VIRAVRFATDRSYVNHVLENHSIKFKFY" FT gene complement(1148..1537) FT /gene="AC2" FT CDS complement(1148..1537) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional regulator" FT /db_xref="GOA:G9CLY1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:G9CLY1" FT /protein_id="AEI91391.1" FT /translation="MLNSSSSTPPSIKPRHRIAKSRATRRRRVDLDCGCSLYVHINCSN FT NGFTHRGTHHCASGREWRLYLGDNKSPVFQDLPSRGPVVHNDQSVPRTDKVQPQPQESI FT GSPQGIPELPSLDDFSDSFWNDLFD" FT gene complement(1458..2534) FT /gene="AC1" FT CDS complement(1458..2534) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:G9CLY2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:G9CLY2" FT /protein_id="AEI91390.1" FT /translation="MPPPKPFKINAKNYFLTYPQCSLTKEEALSQLLNLSIPTNKKFIK FT IARELHEDGQPHLHVLIQFEGKFQCKNNRFFDLVSPTRSAHFHPNVQGAKSSSDVKSYV FT EKDGDTIEWGEFQIDGRSARGGCQTVNDTYAKALNAGSAEEALQIIKEEQPQHFFLQHH FT NLVANASRIFQKAPEPWAPPFHLSSFTNVPDEMQEWADDYFGRGSAARPERPISLIVEG FT DSRTGKTMWARALGPHNYLSGHLDFNSRVYSDEAEYNVIDDVTPHYLKLKHWKELIGAQ FT KEWQSNCKYGKPRKIKGGIPSIVLCNPGEGASYKEYLDKEENASLRAWTLHNAKFIFLD FT SPLYQTTAQDCEEQSNPT" FT gene complement(2120..2377) FT /gene="AC4" FT CDS complement(2120..2377) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:G9CLY3" FT /protein_id="AEI91393.1" FT /translation="MGSLISTSLSSSRGNSNAKITDSSIWSPQPGQHISIRTFRELNHR FT PTSSPTSRRTETPSNGENSKSTEEVLEEVARRLTTHMPRH" XX SQ Sequence 2676 BP; 651 A; 613 C; 652 G; 760 T; 0 other; accggatggc cgcgcgattt ttttatcccc ccacgtggcg ctctcctggt cgcgcgatca 60 aatcccctgt cccccccgcg cgctcccccc gcgcgctcgt ttcctttaat tttaattaaa 120 gcagctaact ttgtactgag ccaatcatat tgcgtctgac gagtctagat atttgggaaa 180 gacttgggcc ctaagttgtt gattaacggc tataaattaa aggaagactg gtcacagtct 240 ttaattcaag atgcctaagc gggacgcccc ttggcgcctg atggcgggaa cttcgaaggt 300 tagccgttca tctaataccg gccctcgtgg aggttctggg cctaagttca ataaggccaa 360 tgagtgggtc aacaggccaa tgtacaggaa gcccaggata taccgggcct tcagaactcc 420 agatgtccct cgagggtgtg aagggccttg caaggtccag tcatacgaac agcgacacga 480 catctcacat gtcggcaagg tcatgtgtat atctgatgtc actcgaggta acggtattac 540 ccaccgtgtc ggtaagcgct tctgtgttaa gtctgtgtat attttaggta agatatggat 600 ggacgagaat atcaagctca agaaccacac gaacagttgc atgttctggc tagtcaggga 660 ccgtagaccg tatggtacac ccatggactt tggtcaggtg ttcaacatgt tcgacaacga 720 gcccagtact gcaaccgtga agaacgacct ccgcgatcgg ttccaggtca tgcacaagtt 780 ctatgccaag gttacgggtg gtcagtatgc cagtaacgag caggctctgg tcaagaggtt 840 ctggaaggtc aacaatcatg tggtttacaa tcaccaagaa gccgggaagt acgagaatca 900 tacggagaac gcactactat tgtatatggc atgtacccat gcctctaacc ctgtgtatgc 960 aacgctgaag attcggatct atttttatga ttcgatcaca aattaataaa atttgaattt 1020 tattgaatga ttttccagta catgattgac atacgaccta tctgttgcga aacgaacagc 1080 tctaattaca ttattaagcg caattacacc taattgctct aagtacagca tgactaaatg 1140 tctaaaccta gtcaaatagg tcgttccaga agctgtcaga gaagtcgtcc agacttggaa 1200 gttcaggaat gccttgtgga gacccaatgc tctcctgagg ttgtggttga accttatctg 1260 tacgtggtac actctggtcg ttgtgtacaa caggtcctct actcggtaaa tcttgaaata 1320 caggggattt gttatctccc agatatagac gccattctct gcctgatgcg cagtgatgtg 1380 ttccccggtg cgtgaatcca ttgttgctgc agttgatgtg gacgtacaag gagcagccgc 1440 agtcaaggtc gactcgtcta cgtcgggttg ctctgctctt cgcaatcctg tgccgtggtt 1500 tgatagaggg gggagtcgag gaagatgaat ttagcattgt ggagtgtcca ggccctcaat 1560 gatgcatttt cctccttgtc gagatactct ttataactgg ccccctctcc aggattgcag 1620 agcacgattg atgggatacc ccctttaatc tttcttggct tgccgtactt gcaatttgac 1680 tgccactctt tttgagcacc aatcaattcc ttccagtgct ttagctttag gtaatggggt 1740 gtgacatcat cgatgacgtt atactcagct tcgtctgagt agacccggga attgaaatct 1800 agatggccgc ttaagtaatt atgtgggcct aatgcacgag cccacatcgt cttgcccgtt 1860 cgagagtcac cctcaacaat taaacttatg ggcctctctg gccgcgcagc ggaacctctc 1920 ccaaaataat catcggccca ctcttgcatc tcgtctggca cgttagtgaa ggaggagagg 1980 tgaaacggag gagcccacgg ttccggagcc ttttgaaaaa tgcgagaagc atttgctacc 2040 aagttatgat gttgaaggaa gaagtgctgt ggttgctctt ctttgattat ttgtaatgct 2100 tcttctgctg aaccggcgtt caatgccttg gcatatgtgt cgttaaccgt ctggcaacct 2160 cctctagcac ttcttccgtc gatttggaat tctccccatt cgatggtgtc tccgtccttc 2220 tcgacgtagg acttgacgtc ggacgatgat ttagctccct gaacgttcgg atggaaatgt 2280 gctgacctgg ttggggagac cagatcgaag aatctgttat ttttgcattg gaatttcccc 2340 tcgaactgga taaggacgtg gagatgaggc tgcccatctt cgtgaagttc tcttgcgatt 2400 ttgatgaact tcttattagt tgggatcgat aggtttaata attgggaaag tgcttcttct 2460 ttagtaagag agcactgtgg ataagtaaga aaataatttt tggcatttat tttaaatggc 2520 tttggtggtg gcattcttgt aaataaggct ggacaccaat tggagtctct caactctttg 2580 ctatgcaatc ggtgtctgga gtctcattta tagttagaaa cccctcaata gaactttaga 2640 tcctgttcgc acacctggcg gcatccgtat aatatt 2676 //