Dbfetch
ID JF694468; SV 1; circular; genomic DNA; STD; VRL; 2678 BP. XX AC JF694468; XX DT 02-JAN-2012 (Rel. 111, Created) DT 25-MAR-2012 (Rel. 112, Last updated, Version 2) XX DE Blainvillea yellow spot virus isolate BgV06A.1.C80 segment DNA-A, complete DE sequence. XX KW . XX OS Blainvillea yellow spot virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2678 RX DOI; 10.1016/j.virol.2012.02.007. RX PUBMED; 22397740. RA Wyant P.S., Strohmeier S., Schafer B., Krenz B., Assuncao I.P., Lima G.S., RA Jeske H.; RT "Circular DNA genomics (circomics) exemplified for geminiviruses in bean RT crops and weeds of northeastern Brazil"; RL Virology 427(2):151-157(2012). XX RN [2] RP 1-2678 RA Wyant P.S., Strohmeier S., Schaefer B., Krenz B., Assuncao I.P., RA Lima G.S.A., Jeske H.; RT ; RL Submitted (15-MAR-2011) to the INSDC. RL Molecular Biology and Plant Virology, University of Stuttgart, RL Pfaffenwaldring 57, Stuttgart, Baden-Wurttenberg 70550, Germany XX DR MD5; d4bc6c243778c56cada22e9441325b0c. XX FH Key Location/Qualifiers FH FT source 1..2678 FT /organism="Blainvillea yellow spot virus" FT /segment="DNA-A" FT /host="Blainvillea rhomboidea" FT /isolate="BgV06A.1.C80" FT /mol_type="genomic DNA" FT /country="Brazil" FT /db_xref="taxon:536081" FT gene 234..989 FT /gene="AV1" FT CDS 234..989 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:G9CLX0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:G9CLX0" FT /protein_id="AEI91375.1" FT /translation="MPKRDAPWRHMTGTSKISRSVNFSPRSSVGPRSNKANDWVNRPMY FT RKPKIYRMYRNPDVPRGCEGPCKVQSYEQRHDVSHVGKVMCVSDVTRGNGITHRVGKRF FT CVKSVYIIGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHKFYGKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSISN" FT gene complement(986..1384) FT /gene="AC3" FT CDS complement(986..1384) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:G9CLX1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:G9CLX1" FT /protein_id="AEI91378.1" FT /translation="MDSRTGELITAPQAENGVYIWETPNPLYFKIYRVEDLRYTSTRVY FT HIQIRFNHNVRKALDLHKAYLNFQVWTTSLTASGVAYLSRFEYLVMLYLNRSGVISINN FT VIRAVRFATDKAYIHHVLEQHSIKFKIY" FT gene complement(1131..1526) FT /gene="AC2" FT CDS complement(1131..1526) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional regulator" FT /db_xref="GOA:G9CLX2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:G9CLX2" FT /protein_id="AEI91377.1" FT /translation="MRNSSSSTPPSIKAQHRAAKQRQRAIRRRRIDLSCGCSIFLHINC FT RGHGFTHRGTHHCTSGGEWRLYLGDTKSPLFQDIPSRGPEIHIDASIPHSDPVQPQRAE FT SVGSPQGLSELPSLDDFPDGFWSSVLK" FT gene complement(1447..2523) FT /gene="AC1" FT CDS complement(1447..2523) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:G9CLX3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:G9CLX3" FT /protein_id="AEI91376.1" FT /translation="MSKPQRFRIQSKNYFLTYPKCSITKEEALEQILALDTPTNKKYIR FT VCRELHENGEPHLHALLQFEGKFTCTNCRFFDLRHPRNSNVCHGKYESCRSSSDAKSYV FT EKDGDYIEWGNFQIDGRSARGGKQTANDSYAKALNTSSIEQALDIIKEEQPQHFFLQHH FT NIVANAQRIFKTVPEPWVSPFPLSSFTNVPEEMQAWADDYFGRSAAARPERPISIIIEG FT DSRTGKTMWARALGVHNYLSGHLDFNPKCYSNEAHYNIIDDVDPKYLKMKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPCIVLCNPGEGASYKSFLDRPENTGLNNWTKHNAKFVFLN FT TPLYQSAAPSSETTSTCD" FT gene complement(2109..2366) FT /gene="AC4" FT CDS complement(2109..2366) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:G9CLX4" FT /protein_id="AEI91379.1" FT /translation="MGSLISMLCCNSKGSSRARIADSSIYDTQEIPMFVMASTNLVGHP FT PTPNHMLRRTEITSNGVIFRSTEDLLEEVNRQLTIHTQRR" XX SQ Sequence 2678 BP; 677 A; 560 C; 612 G; 828 T; 1 other; acctgagggc cgccctccgg agactcccct tttgacgtgg cgctctctcc tccgctggat 60 tgtattatct tggagattgg gccggtctct tttgccccac cttgctttaa tttaaagttg 120 ttaggcccaa tcattttgcg tttcccgagc ttagatatta ttaaagtctt gggcgccaag 180 ttcgataaag gctataaatt atatggtgac cactcatgtc actttaattc aaaatgccta 240 agcgcgatgc cccatggcgc catatgacag ggacgtccaa aattagccgg tccgttaatt 300 tctcacctcg ttcaagtgtt gggccaagat ccaacaaggc caatgattgg gttaacaggc 360 ctatgtacag gaagcccaag atatatcgga tgtacaggaa ccccgatgtt ccaaggggtt 420 gtgaagggcc ttgtaaagtc cagtcttatg agcaacgtca tgatgtgtca catgttggca 480 aggtgatgtg tgtgtcggac gtgacacgcg gcaatggtat cacccatcgt gttgggaaac 540 gtttctgtgt taagtctgta tatattatag gtaagatatg gatggacgag aatatcaagt 600 tgaagaacca taccaacagt gttatgtttt ggttggtacg agaccgtaga ccctatggaa 660 cccctatgga ctttggccaa gtgtttaaca tgtttgacaa tgagcctagt acggctactg 720 ttaagaacga tcttcgtgat cgtttccaag ttatgcacaa gttttatggc aaagtcactg 780 gtggacagta tgcaagtaat gaacaggcgc ttgttaagcg cttttggaag gtgaacaact 840 atgtggtgta caaccatcaa gaagctggga agtatgagaa tcacactgag aacgcattat 900 tattgtatat ggcatgtact catgcctcta atcctgtgta tgctacgtta aagatacgga 960 tctattttta cgattcgata tccaattaat aaattttgaa ctttattgaa tgttgttcaa 1020 gtacatgatg gatatatgct ttgtctgttg caaagcgaac tgctctaatt acattgttaa 1080 ttgaaattac acctgaacga ttgagataca acataactaa atactcaaat ctacttaagt 1140 acgctactcc agaagccgtc agggaagtcg tccagacttg gaagttcaga taagccttgt 1200 ggagatccaa cgctttccgc acgttgtggt tgaaccggat ctgaatgtgg tatactcgcg 1260 tcgatgtgta tctcaggtcc tctactcggt atatcttgaa atagagggga tttggtgtct 1320 cccagatata gacgccattc tccgcctgag gtgcagtgat gagttcccct gtgcgtgaat 1380 ccatgacctc tacagtttat atggagaaat atggaacagc cacacgatag atcaattcgt 1440 cttctcctaa tcgcacgttg acgttgtttc gctgctcggt gctgcgcttt gatagagggg 1500 ggtgttgagg aagacgaatt tcgcattgtg ctttgtccag ttatttaatc ctgtattttc 1560 gggtctgtct aggaagcttt tatagctggc cccctcgcca ggattgcaaa gcacgatgca 1620 tgggatacct cctttaattt gaactggttt accgtattta caatttgact gccagtcctt 1680 ttgggcccca attaactctt tccagtgttt catctttaaa tatttggggt ccacgtcatc 1740 aataatgttg tagtgtgctt cgttggaata gcacttaggg ttaaagtcta ggtgaccact 1800 taaataattg tggaccccta aagcacgtgc ccacatsgtc ttccctgttc gagaatcacc 1860 ttcaattatt atactaatag gtctctccgg ccgcgcagcg gcacttcttc cgaaataatc 1920 gtccgcccaa gcttgcatct cttctggcac gttagtgaat gatgataatg gaaacggaga 1980 aacccatggc tctggaactg ttttaaatat ccgttgagca tttgcaacta tgttgtgatg 2040 ttggaggaag aagtgttgtg gctgttcctc cttgattata tctagagcct gttctatgga 2100 cgatgtgttt aacgcctttg cgtatgaatc gttagctgtc tgtttacctc ctcgagcaga 2160 tcttccgtcg atctgaaaat taccccattc gatgtaatct ccgtccttct caacatatga 2220 tttggcgtcg gaggatgacc tacaagattc gtacttgcca tgacaaacat tggaatttct 2280 tgggtgtcgt agatcgaaga atctgcaatt cgtgcacgtg aacttccctt cgaattgcag 2340 caaagcatgg agatgaggct ccccattttc gtgtaactct ctacatacac gaatatattt 2400 cttgttcgtt ggtgtatcta atgcgagaat ctgttcgaga gcctcttctt tggttatgga 2460 acattttgga tatgtgagga aataattttt agactgtatt ctaaaacgct gaggtttgct 2520 catatttgaa cccagaagag tgtctccgga tggtgtctcc aactcccccc cttgaaactg 2580 ggcttatagt attggagact agagtcaata tatatgctag aagatatttg ggttagattg 2640 tggtccctac acccttgcgg ccctcagtat ataatatt 2678 //