ID JF510459; SV 1; circular; genomic DNA; STD; VRL; 2759 BP. XX AC JF510459; XX DT 29-FEB-2012 (Rel. 111, Created) DT 04-MAY-2012 (Rel. 112, Last updated, Version 2) XX DE Cotton leaf curl Burewala virus isolate In:Dabwali1:2010 segment DNA A, DE complete sequence. XX KW . XX OS Cotton leaf curl Burewala virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2759 RX PUBMED; 22307170. RA Rajagopalan P.A., Naik A., Katturi P., Kurulekar M., Kankanallu R.S., RA Anandalakshmi R.; RT "Dominance of resistance-breaking cotton leaf curl Burewala virus (CLCuBuV) RT in northwestern India"; RL Arch. Virol. 157(5):855-868(2012). XX RN [2] RP 1-2759 RA Naik A.S., Katturi P., Rajagopalan P.A., Kankanallu R.S., Anandalakshmi R.; RT ; RL Submitted (08-MAR-2011) to the INSDC. RL Plant-Virus Interactions Lab, Maharashtra Hybrid Seeds Co Ltd, Jalna - RL Aurangabad road, Jalna, Maharashtra 431 203, India XX DR MD5; c9eedd93d4ca53006bd90324c822a2ed. XX FH Key Location/Qualifiers FH FT source 1..2759 FT /organism="Cotton leaf curl Burewala virus" FT /segment="DNA A" FT /host="cotton" FT /isolate="In:Dabwali1:2010" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="16-Sep-2010" FT /note="PCR_primers=fwd_name: CBVs-C1For-2533-2569, FT rev_name: CBVs-V1Rev-528-494" FT /db_xref="taxon:620894" FT gene 132..488 FT /gene="V2" FT CDS 132..488 FT /codon_start=1 FT /gene="V2" FT /product="pre coat protein" FT /db_xref="GOA:H6BA20" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:H6BA20" FT /protein_id="AFB83511.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAVKYLLLVEKTYSPDTLGFDFIKAL FT ILAIRARNYVESTSKYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKSRCS" FT gene complement(283..807) FT /gene="C5" FT CDS complement(283..807) FT /codon_start=1 FT /gene="C5" FT /product="C5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:H6BA21" FT /protein_id="AFB83512.1" FT /translation="MNILYSRRTGLIIKHIKYLSKILRFINRSTISNQEKHHTIRVILR FT LNVLIHPDLTQHINRLNTKSLTNSMGQPSTTSNITNTHYFTYMLNIMSGLKRLNLTWTF FT TSSRNIWTSVHPVHPGLSVHGPVRPCFCFGDADNGGSSTAHIWAVEVETAAYLRSGRGN FT DYICWSIRHNS" FT gene 292..1065 FT /gene="V1" FT CDS 292..1062 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:H6BA22" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:H6BA22" FT /protein_id="AFB83513.1" FT /translation="MSNRPANIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1059..1463) FT /gene="C3" FT CDS complement(1059..1463) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancer protein" FT /db_xref="GOA:H6BA23" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:H6BA23" FT /protein_id="AFB83514.1" FT /translation="MDSRTGEPITAARAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI FT LTIRIHFYLNLRKALGIHKCFIAFRIWMTSQPSTGRFLRVFRTQVLKYLNNLGIVSINN FT VVRAVDHVLWNVLQHVVFVDQSSSIKFNIY" FT gene complement(2137..2682) FT /gene="C4" FT CDS complement(2137..2682) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H6BA24" FT /protein_id="AFB83515.1" FT /translation="MPFGDTINCIQSPIPRVKAHQLFLIDQSLWLPPNVLKYKPKIISS FT LIHSAHSLKRKHFPKFKPSTRPRIKNTSNSAESYTKMGALISMCSCSSRVNSSAAITDS FT SPWYHHPGQHISIRTFRKLNQAQMSRPTSTRTGTLSSGESFRSMEDQQEEDSRQPTTLT FT PQHLTQAVSQRLLESLRN" XX SQ Sequence 2759 BP; 720 A; 548 C; 646 G; 845 T; 0 other; accggatggc cgcgcgattt ttttgtgggc cctaccatta actcttgtcg gccaatcata 60 tgacgcgctc aaagcttaaa taattctccc gcttattata agtacttcgt tgctaagttt 120 gcgtttgaaa aatgtgggat ccactgttaa atgagttccc cgacaccgtt cacggtttta 180 ggtgtatgtt agcagttaaa tatttgcttt tagtagagaa aacttactct ccggatacat 240 tgggtttcga ttttataaag gctttaatcc tggcaataag ggctaggaat tatgtcgaat 300 cgaccagcaa atataatcat ttccacgccc gcttcgaagg tacgccgccg tctcaacttc 360 gacagcccat atgtgagccg tgctgctgcc cccattgtcc gcgtcaccaa agcaaaagca 420 tgggcgaaca ggcccatgaa cagaaagccc aggatgtaca ggatgtacag aagtccagat 480 gttcctagag gatgtgaagg tccatgtaag gttcagtcgt ttgagtccag acatgatatt 540 cagcatatag gtaaagtaat gtgtgttagt gatgttactc gtggtactgg gctgacccat 600 agagttggta agagattttg tgttaagtct gtttatgtgt tgggtaagat ctggatggat 660 gagaacatta agacgaagaa tcacacgaat agtgtgatgt ttttcttggt tagagatcgt 720 agacctgttg ataaacctca agattttgga gaggtattta atatgtttga taatgagccc 780 agtacggcga ctgtaaagaa tgttcatcgt gataggtatc aagttctgcg caaatggtat 840 gcaactgtca ccggtggaca atacgcttca aaggaacaag ctctcgtgaa gaaatttatt 900 agagttaata attatgttgt gtataaccag caggaagctg gcaagtatga gaatcattct 960 gagaatgctt taatgttgta tatggcgtgt actcacgcct ctaacccagt gtatgctacc 1020 ttgaagatac ggatctactt ctatgattcc gtgacaaatt aataaatatt gaattttatt 1080 gaagatgatt ggtctacaaa tacaacatgt tgtaatacat tccataatac atgatcaact 1140 gctctaacta cattattaat actgacaatt cctaagttat ttaaatattt tagcacttga 1200 gtcctaaaga cccttaagaa acgaccagtg gaaggctgtg aggtcatcca gattcggaaa 1260 gctatgaaac atttgtgtat ccccaacgct ttcctcaggt tgagatagaa gtggatcctg 1320 atcgtgagta tatccatatt cgtcgtgaat ggacggttga cgtggctgat gatcttgaaa 1380 tagaggggat ttggaacttc ccagatatat gcgccattcc ctgcccgagc tgcagtgatg 1440 ggttcccctg tgcgtgaatc catggttgtg gcagttgatt gacagatact aagaacaccc 1500 tcattcaaga tctactctcc tcctcctgtt gcgtctcttc gcttccctgt gctgtacttt 1560 gattggaagc tgagtagaga ggtccttcga gagtgatgaa tattgcattt tttaaggccc 1620 aattctttaa tgatgtgttt ttttcctcat tgaggaattc cgtataactg ctgtttggac 1680 caggattgca caggaagatt gtcggtatcc cgcctttaat ttgaactggc tttccgtatt 1740 ttgtgttgga ctgccagtct ctttgggccc ccatgaactc tttaaagtgt ttgaggaaat 1800 gcgggtcgac gtcatcaatg acgttgtacc aggcgtcgtt actgtatact ttgggactca 1860 ggtccagatg tccgcacaaa tagttatgtg gtcccaatga tctagccctc atcgtcttcc 1920 ccgttcgact atctccctca attactatac tccgaggtct aaggggccgc gcagcggcat 1980 cgacaacgtt atcgatggcc caaacttcaa gttcttctgg aacttgatcg aaagaagaag 2040 gagaaaaagg agaaatatag ggagccggtg gctcctgaaa gattctgtct agatttgcat 2100 ttaaattatg aaattgtagt acaaaatctt taggagctag ttccttaatg actctaagag 2160 cctctgactt actgcctgcg ttaagtgctg cggcgtaagc gtcgttggct gcctgctgtc 2220 ctcctcctgc tgatcttcca tcgatctgaa actctcccca ctcgagagtg tccccgtcct 2280 tgtcgatgta ggccttgaca tctgagcttg atttagcttc ctgaatgttc ggatggaaat 2340 gtgctgacct gggtggtgat accagggcga agaatctgtt attgctgcag acgaattgac 2400 cctcgaactg catgagcaca tggagatgag ggctcccatc ttcgtgtaac tctctgcaga 2460 gtttgatgta ttttttattc gagggcgtgt tgatggcttg aatttgggaa agtgcttcct 2520 ctttagtgag tgagcactgt ggattagtga tgaaataatt tttggcttgt attttaaaac 2580 gtttgggggg agccataggc tttggtcaat tagaaacaac tgatgggctt ttactctggg 2640 aattggagac tggatgcaat ttatagtgtc tccaaatggc atattctgta aataactaaa 2700 agtttgtttg aaattcaaat tcccctttgg gctccaaaag cggccatccg tataatatt 2759 //